Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DPH6-AS1 Gene

Subcategory (RNA class) for DPH6-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for DPH6-AS1 Gene

  • DPH6 Antisense RNA 1 (Head To Head) 2 3
  • ATPBD4 Antisense RNA 1 (Non-Protein Coding) 2 3
  • ATPBD4 Antisense RNA 1 (Head To Head) 2 3
  • ATPBD4 Antisense RNA 1 2
  • ATPBD4-AS1 3

External Ids for DPH6-AS1 Gene

ORGUL Members for DPH6-AS1 Gene

Previous HGNC Symbols for DPH6-AS1 Gene

  • ATPBD4-AS1

Previous GeneCards Identifiers for DPH6-AS1 Gene

  • GC15P035841

Summaries for DPH6-AS1 Gene

GeneCards Summary for DPH6-AS1 Gene

DPH6-AS1 (DPH6 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DPH6-AS1 Gene

Genomics for DPH6-AS1 Gene

Genomic Location for DPH6-AS1 Gene

Start:
35,546,195 bp from pter
End:
35,859,001 bp from pter
Size:
312,807 bases
Orientation:
Plus strand

Genomic View for DPH6-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DPH6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DPH6-AS1 Gene

No data available for Regulatory Elements for DPH6-AS1 Gene

Proteins for DPH6-AS1 Gene

Post-translational modifications for DPH6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DPH6-AS1 Gene

Domains for DPH6-AS1 Gene

Gene Families for DPH6-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DPH6-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DPH6-AS1 Gene

Function for DPH6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DPH6-AS1 Gene

Localization for DPH6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DPH6-AS1 Gene

Pathways for DPH6-AS1 Gene

SuperPathways for DPH6-AS1 Gene

No Data Available

Interacting Proteins for DPH6-AS1 Gene

Gene Ontology (GO) - Biological Process for DPH6-AS1 Gene

None

No data available for Pathways by source for DPH6-AS1 Gene

Transcripts for DPH6-AS1 Gene

mRNA/cDNA for DPH6-AS1 Gene

(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DPH6-AS1 Gene

No ASD Table

Relevant External Links for DPH6-AS1 Gene

GeneLoc Exon Structure for
DPH6-AS1
ECgene alternative splicing isoforms for
DPH6-AS1

Expression for DPH6-AS1 Gene

mRNA expression in normal human tissues for DPH6-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DPH6-AS1 Gene

This gene is overexpressed in Brain - Nucleus accumbens (basal ganglia) (5.8).
genes like me logo Genes that share expressions with DPH6-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for DPH6-AS1 Gene

Orthologs for DPH6-AS1 Gene

Evolution for DPH6-AS1 Gene

ENSEMBL:
Gene Tree for DPH6-AS1 (if available)
TreeFam:
Gene Tree for DPH6-AS1 (if available)

No data available for Orthologs for DPH6-AS1 Gene

Paralogs for DPH6-AS1 Gene

No data available for Paralogs for DPH6-AS1 Gene

Variants for DPH6-AS1 Gene

Sequence variations from dbSNP and Humsavar for DPH6-AS1 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs319878 -- 35,636,402(-) CAAAG(A/C)CTTGT intron-variant
rs319879 -- 35,633,840(-) TTTTA(C/T)ACTGC intron-variant
rs319880 -- 35,633,310(-) GAAGT(A/T)CTCCT intron-variant
rs319881 -- 35,630,753(-) GCAAC(A/C)CTCTT intron-variant
rs319882 -- 35,664,388(-) AATAT(A/G)GTAAT intron-variant

Relevant External Links for DPH6-AS1 Gene

HapMap Linkage Disequilibrium report
DPH6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for DPH6-AS1 Gene

Disorders for DPH6-AS1 Gene

No disorders were found for DPH6-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for DPH6-AS1 Gene

Publications for DPH6-AS1 Gene

  1. Genome-wide association study identifies ephrin type A receptors implicated in paclitaxel induced peripheral sensory neuropathy. (PMID: 23776197) Leandro-GarcA-a L.J. … RodrA-guez-Antona C. (J. Med. Genet. 2013) 3
  2. Genome-wide association studies and epistasis analyses of candidate genes related to age at menarche and age at natural menopause in a Korean population. (PMID: 24045676) Pyun J.A. … Kwack K. (Menopause 2013) 3

Products for DPH6-AS1 Gene

Sources for DPH6-AS1 Gene

Back to Top

Content