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Aliases for DOCK9-AS2 Gene

Subcategory (RNA class) for DOCK9-AS2 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for DOCK9-AS2 Gene

  • DOCK9 Antisense RNA 2 (Head To Head) 2 3 5
  • DOCK9 Antisense RNA 2 (Non-Protein Coding) 2
  • DOCK9 Antisense RNA 2 2

External Ids for DOCK9-AS2 Gene

ORGUL Members for DOCK9-AS2 Gene

Previous GeneCards Identifiers for DOCK9-AS2 Gene

  • GC13U900905
  • GC13P099741

Summaries for DOCK9-AS2 Gene

GeneCards Summary for DOCK9-AS2 Gene

DOCK9-AS2 (DOCK9 Antisense RNA 2 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DOCK9-AS2 Gene

Genomics for DOCK9-AS2 Gene

Regulatory Elements for DOCK9-AS2 Gene

Enhancers for DOCK9-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G099084 1.6 FANTOM5 ENCODE dbSUPER 27 +0.0 24 3.8 PKNOX1 ATF1 WRNIP1 DMAP1 ZNF2 YY1 ZNF121 GLIS2 GATA2 SP3 DOCK9-AS2 DOCK9
GH13G099044 1.6 FANTOM5 Ensembl ENCODE dbSUPER 24.2 -40.5 -40520 2.7 PKNOX1 MAX CEBPG ZNF664 CTBP1 ZNF316 GATA3 ZBTB48 GLI2 SCRT2 DOCK9-AS2 DOCK9 RNU6-83P DOCK9-AS1 GC13M099085
GH13G098971 1.6 FANTOM5 ENCODE dbSUPER 22 -111.2 -111170 8.0 PKNOX1 SIN3A FEZF1 TCF12 ZNF766 ELK1 GATA2 FOS SMARCA4 MYNN DOCK9-AS2 DOCK9 RNU6-83P DOCK9-AS1 GC13M098967 RPL7L1P12
GH13G098996 1.3 Ensembl ENCODE dbSUPER 24.7 -88.5 -88462 2.8 HDAC1 PKNOX1 ETV1 JUN MAX ZNF644 RAD21 YY1 FOSL1 HNF4G DOCK9-AS2 DOCK9 RNU6-83P DOCK9-AS1 GC13P098992 GC13P099026
GH13G099052 1.5 Ensembl ENCODE dbSUPER 21.3 -32.2 -32211 3.1 PKNOX1 ATF1 CREB3L1 ARNT TCF12 ZNF766 ELK1 GATA2 NCOA1 REST DOCK9 DOCK9-AS2 DOCK9-AS1 RNU6-83P GC13M099085
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DOCK9-AS2 on UCSC Golden Path with GeneCards custom track

Promoters for DOCK9-AS2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000065033 77 2801 PKNOX1 WRNIP1 DMAP1 ZNF2 YY1 ZNF121 GLIS2 GATA2 SP3 NFYC

Genomic Location for DOCK9-AS2 Gene

Chromosome:
13
Start:
99,086,723 bp from pter
End:
99,088,625 bp from pter
Size:
1,903 bases
Orientation:
Plus strand

Genomic View for DOCK9-AS2 Gene

Genes around DOCK9-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DOCK9-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DOCK9-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DOCK9-AS2 Gene

Proteins for DOCK9-AS2 Gene

Post-translational modifications for DOCK9-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DOCK9-AS2 Gene

Domains & Families for DOCK9-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DOCK9-AS2 Gene

Function for DOCK9-AS2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DOCK9-AS2 Gene

Localization for DOCK9-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DOCK9-AS2 Gene

Pathways & Interactions for DOCK9-AS2 Gene

SuperPathways for DOCK9-AS2 Gene

No Data Available

Interacting Proteins for DOCK9-AS2 Gene

Gene Ontology (GO) - Biological Process for DOCK9-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DOCK9-AS2 Gene

Drugs & Compounds for DOCK9-AS2 Gene

No Compound Related Data Available

Transcripts for DOCK9-AS2 Gene

mRNA/cDNA for DOCK9-AS2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DOCK9-AS2 Gene

DOCK9 antisense RNA 2 (head to head):
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DOCK9-AS2 Gene

No ASD Table

Relevant External Links for DOCK9-AS2 Gene

GeneLoc Exon Structure for
DOCK9-AS2
ECgene alternative splicing isoforms for
DOCK9-AS2

Expression for DOCK9-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DOCK9-AS2 Gene

SOURCE GeneReport for Unigene cluster for DOCK9-AS2 Gene:

Hs.344872
genes like me logo Genes that share expression patterns with DOCK9-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DOCK9-AS2 Gene

Orthologs for DOCK9-AS2 Gene

Evolution for DOCK9-AS2 Gene

ENSEMBL:
Gene Tree for DOCK9-AS2 (if available)
TreeFam:
Gene Tree for DOCK9-AS2 (if available)

No data available for Orthologs for DOCK9-AS2 Gene

Paralogs for DOCK9-AS2 Gene

No data available for Paralogs for DOCK9-AS2 Gene

Variants for DOCK9-AS2 Gene

Sequence variations from dbSNP and Humsavar for DOCK9-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000901541 -- 99,085,720(+) CCTCC(C/T)GGAGT intron-variant, upstream-variant-2KB
rs1001297817 -- 99,088,320(+) TGACA(C/G)AGCAG nc-transcript-variant, upstream-variant-2KB
rs1001348355 -- 99,088,524(+) ACAAC(A/G)CAAAC nc-transcript-variant
rs1001636049 -- 99,087,625(+) CCGTT(-/TC)TGTCT nc-transcript-variant, upstream-variant-2KB
rs1001667106 -- 99,087,329(+) TCACC(C/T)TGGAC nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DOCK9-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv3358n54 CNV gain 21841781
dgv3359n54 CNV loss 21841781
dgv3360n54 CNV gain 21841781
dgv3361n54 CNV gain 21841781
dgv3362n54 CNV gain 21841781
esv27384 CNV loss 19812545
esv3892433 CNV gain 25118596
nsv1043886 CNV loss 25217958
nsv1050094 CNV gain 25217958
nsv1069767 CNV deletion 25765185
nsv562927 CNV gain 21841781
nsv562934 CNV gain+loss 21841781
nsv562935 CNV gain 21841781
nsv562942 CNV loss 21841781

Relevant External Links for DOCK9-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DOCK9-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DOCK9-AS2 Gene

Disorders for DOCK9-AS2 Gene

Relevant External Links for DOCK9-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DOCK9-AS2

No disorders were found for DOCK9-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DOCK9-AS2 Gene

Publications for DOCK9-AS2 Gene

  1. An evaluation of the assembly of an approximately 15-Mb region on human chromosome 13q32-q33 linked to bipolar disorder and schizophrenia. (PMID: 11991713) Christian S.L. … Gershon E.S. (Genomics 2002) 3 64

Products for DOCK9-AS2 Gene

Sources for DOCK9-AS2 Gene

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