Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DOC2GP Gene

Aliases for DOC2GP Gene

  • Double C2 Domain Gamma Pseudogene 2 3 5
  • Double C2-Like Domains, Gamma, Pseudogene 2

External Ids for DOC2GP Gene

Previous GeneCards Identifiers for DOC2GP Gene

  • GC11M067380

Summaries for DOC2GP Gene

GeneCards Summary for DOC2GP Gene

DOC2GP (Double C2 Domain Gamma Pseudogene) is a Pseudogene.

Additional gene information for DOC2GP Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DOC2GP Gene

Genomics for DOC2GP Gene

GeneHancer (GH) Regulatory Elements for DOC2GP Gene

Promoters and enhancers for DOC2GP Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH11I067612 Enhancer 1.3 Ensembl ENCODE dbSUPER 561.4 +1.6 1622 4.1 HDGF PKNOX1 RB1 SIN3A KLF5 RAD21 GLIS2 SCRT2 ZNF207 ZNF143 DOC2GP NUDT8 ANKRD13D RAD9A CDK2AP2 PIR42297 GC11M067584
GH11I067617 Enhancer 0.7 ENCODE 550.8 -1.1 -1108 0.2 SOX13 FOXA2 SAP130 ARID4B ZNF384 CEBPG ZSCAN9 NFATC1 NR2F6 THAP11 DOC2GP GC11M067584
GH11I067618 Enhancer 0.6 ENCODE 550.8 -0.8 -848 0.2 SSRP1 NFATC1 ARID4B NR2C1 ZNF384 NR2F6 PPARG ZSCAN9 DOC2GP GC11M067584
GH11I067627 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 23.9 -15.0 -15031 8.6 HDGF CLOCK MLX ARNT ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B NUDT8 DOC2GP ENSG00000255119 ANKRD13D CDK2AP2 NDUFV1 TBX10
GH11I067579 Promoter/Enhancer 2.5 EPDnew Ensembl ENCODE dbSUPER 12.6 +31.9 31920 10.2 HDGF PKNOX1 CLOCK FOXA2 SMAD1 MLX ARNT ZFP64 ARID4B SIN3A GSTP1 ENSG00000255119 NUDT8 PTPRCAP NDUFV1 C11orf72 DOC2GP RHOD LRP5 ALDH3B2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DOC2GP on UCSC Golden Path with GeneCards custom track

Genomic Locations for DOC2GP Gene

Genomic Locations for DOC2GP Gene
chr11:67,612,651-67,616,257
(GRCh38/hg38)
Size:
3,607 bases
Orientation:
Minus strand
chr11:67,380,124-67,383,728
(GRCh37/hg19)

Genomic View for DOC2GP Gene

Genes around DOC2GP on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DOC2GP Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DOC2GP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DOC2GP Gene

Proteins for DOC2GP Gene

Post-translational modifications for DOC2GP Gene

No Post-translational modifications

No data available for DME Specific Peptides for DOC2GP Gene

Domains & Families for DOC2GP Gene

Gene Families for DOC2GP Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DOC2GP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DOC2GP Gene

Function for DOC2GP Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DOC2GP Gene

Localization for DOC2GP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DOC2GP Gene

Pathways & Interactions for DOC2GP Gene

SuperPathways for DOC2GP Gene

No Data Available

Interacting Proteins for DOC2GP Gene

Gene Ontology (GO) - Biological Process for DOC2GP Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DOC2GP Gene

Drugs & Compounds for DOC2GP Gene

No Compound Related Data Available

Transcripts for DOC2GP Gene

mRNA/cDNA for DOC2GP Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DOC2GP Gene

Double C2-like domains, gamma, pseudogene:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DOC2GP Gene

No ASD Table

Relevant External Links for DOC2GP Gene

GeneLoc Exon Structure for
DOC2GP
ECgene alternative splicing isoforms for
DOC2GP

Expression for DOC2GP Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DOC2GP Gene

NURSA nuclear receptor signaling pathways regulating expression of DOC2GP Gene:

DOC2GP

SOURCE GeneReport for Unigene cluster for DOC2GP Gene:

Hs.523838
genes like me logo Genes that share expression patterns with DOC2GP: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DOC2GP Gene

Orthologs for DOC2GP Gene

Evolution for DOC2GP Gene

ENSEMBL:
Gene Tree for DOC2GP (if available)
TreeFam:
Gene Tree for DOC2GP (if available)

No data available for Orthologs for DOC2GP Gene

Paralogs for DOC2GP Gene

No data available for Paralogs for DOC2GP Gene

Variants for DOC2GP Gene

Sequence variations from dbSNP and Humsavar for DOC2GP Gene

SNP ID Clin Chr 11 pos Variation AA Info Type
rs1000117403 -- 67,616,725(-) C/T upstream_transcript_variant
rs1000503596 -- 67,614,298(-) T/G intron_variant
rs1000532547 -- 67,614,795(-) C/A intron_variant
rs1000706233 -- 67,614,585(-) C/T intron_variant
rs1002085668 -- 67,615,237(-) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DOC2GP Gene

Variant ID Type Subtype PubMed ID
dgv1214n100 CNV gain 25217958
dgv154n27 CNV loss 19166990
dgv1981n54 CNV gain 21841781
dgv1982n54 CNV loss 21841781
esv2422195 CNV duplication 17116639
nsv468606 CNV gain 19166990
nsv951023 CNV deletion 24416366

Additional Variant Information for DOC2GP Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DOC2GP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DOC2GP Gene

Disorders for DOC2GP Gene

Additional Disease Information for DOC2GP

No disorders were found for DOC2GP Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DOC2GP Gene

Publications for DOC2GP Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang ZD … Gerstein M (Genome biology 2010) 2 3 58
  2. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) International Human Genome Sequencing Consortium (Nature 2004) 3 58

Products for DOC2GP Gene

Sources for DOC2GP Gene

Content
Loading form....