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Aliases for DOC2GP Gene

Aliases for DOC2GP Gene

  • Double C2-Like Domains, Gamma, Pseudogene 2 3

External Ids for DOC2GP Gene

Previous GeneCards Identifiers for DOC2GP Gene

  • GC11M067380

Summaries for DOC2GP Gene

GeneCards Summary for DOC2GP Gene

DOC2GP (Double C2-Like Domains, Gamma, Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DOC2GP Gene

Genomics for DOC2GP Gene

Genomic Location for DOC2GP Gene

Start:
67,612,653 bp from pter
End:
67,616,257 bp from pter
Size:
3,605 bases
Orientation:
Minus strand

Genomic View for DOC2GP Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DOC2GP Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DOC2GP Gene

No data available for Regulatory Elements for DOC2GP Gene

Proteins for DOC2GP Gene

Post-translational modifications for DOC2GP Gene

No Post-translational modifications

No data available for DME Specific Peptides for DOC2GP Gene

Domains for DOC2GP Gene

Gene Families for DOC2GP Gene

HGNC:
  • SYT :Synaptotagmins

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DOC2GP: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DOC2GP Gene

Function for DOC2GP Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DOC2GP Gene

Localization for DOC2GP Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DOC2GP Gene

Pathways for DOC2GP Gene

SuperPathways for DOC2GP Gene

No Data Available

Interacting Proteins for DOC2GP Gene

Gene Ontology (GO) - Biological Process for DOC2GP Gene

None

No data available for Pathways by source for DOC2GP Gene

Transcripts for DOC2GP Gene

mRNA/cDNA for DOC2GP Gene

(2) Additional mRNA sequences :
(5) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DOC2GP Gene

Double C2-like domains, gamma, pseudogene:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DOC2GP Gene

No ASD Table

Relevant External Links for DOC2GP Gene

GeneLoc Exon Structure for
DOC2GP
ECgene alternative splicing isoforms for
DOC2GP

Expression for DOC2GP Gene

mRNA expression in normal human tissues for DOC2GP Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

SOURCE GeneReport for Unigene cluster for DOC2GP Gene Hs.523838

genes like me logo Genes that share expressions with DOC2GP: view

No data available for mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for DOC2GP Gene

Orthologs for DOC2GP Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for DOC2GP Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Doc2g 16
Species with no ortholog for DOC2GP:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DOC2GP Gene

ENSEMBL:
Gene Tree for DOC2GP (if available)
TreeFam:
Gene Tree for DOC2GP (if available)

Paralogs for DOC2GP Gene

No data available for Paralogs for DOC2GP Gene

Variants for DOC2GP Gene

Sequence variations from dbSNP and Humsavar for DOC2GP Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs4148959 -- 67,613,639(+) GCCCC(A/C)ATCCA intron-variant
rs4148960 -- 67,614,186(+) CTGTG(A/G)GCACC intron-variant
rs4148961 -- 67,614,241(+) GTACA(C/T)GGGGC intron-variant
rs4148963 -- 67,613,300(+) GGGTC(-/TTC)CTGTG downstream-variant-500B
rs7130679 -- 67,617,654(+) tgtcc(A/G)tcttt upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DOC2GP Gene

Variant ID Type Subtype PubMed ID
nsv897801 CNV Loss 21882294
dgv1194n71 CNV Loss 21882294
esv2422195 CNV Duplication 17116639
dgv1196n71 CNV Loss 21882294
nsv897815 CNV Loss 21882294
nsv468606 CNV Gain 19166990
dgv1197n71 CNV Loss 21882294
dgv154n27 CNV Loss 19166990
dgv1198n71 CNV Loss 21882294
dgv1199n71 CNV Loss 21882294

Relevant External Links for DOC2GP Gene

HapMap Linkage Disequilibrium report
DOC2GP

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DOC2GP Gene

Disorders for DOC2GP Gene

No disorders were found for DOC2GP Gene.

No data available for UniProtKB/Swiss-Prot for DOC2GP Gene

Publications for DOC2GP Gene

  1. Identification and analysis of unitary pseudogenes: historic and contemporary gene losses in humans and other primates. (PMID: 20210993) Zhang Z.D. … Gerstein M. (Genome Biol. 2010) 2 3
  2. Finishing the euchromatic sequence of the human genome. (PMID: 15496913) (Nature 2004) 3

Products for DOC2GP Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DOC2GP
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DOC2GP
    • Block miRNA regulation of DOC2GP using miScript Target Protectors

    Sources for DOC2GP Gene

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