Aliases for DNMT3AP1 Gene
External Ids for DNMT3AP1 Gene
- HGNC: 23164
- Entrez Gene: 130802
- Ensembl: ENSG00000224071
Previous GeneCards Identifiers for DNMT3AP1 Gene
- GC02U900736
- GC02M066900
- GC02M067048
Summaries for DNMT3AP1 Gene
GeneCards Summary for DNMT3AP1 Gene
DNMT3AP1 (DNA Methyltransferase 3A Pseudogene 1) is a Pseudogene.
Additional gene information for DNMT3AP1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNMT3AP1 Gene
Genomics for DNMT3AP1 Gene
GeneHancer (GH) Regulatory Elements for DNMT3AP1 Gene
Promoters and enhancers for DNMT3AP1 Gene
| GeneHancer (GH) Identifier | GH Type | GH Score |
GH Sources | Gene Association Score | Total Score | TSS distance (kb) | Number of Genes Away | Size (kb) | Transcription Factor Binding Sites |
Gene Targets |
|---|---|---|---|---|---|---|---|---|---|---|
| GH02I066824 | Enhancer | 0.4 | VISTA | 0.8 | -2.7 | -2741 | 0.8 | GC02P066826 DNMT3AP1 | ||
| GH02I066805 | Enhancer | 0.4 | UCNEbase | 0.4 | +17.1 | 17113 | 0.2 | DNMT3AP1 GC02P066729 | ||
| GH02I066790 | Enhancer | 0.3 | ENCODE | 0.3 | +31.4 | 31396 | 0.6 | NR2F2 | DNMT3AP1 GC02P066729 | |
| GH02I066803 | Enhancer | 0.2 | ENCODE | 0.4 | +18.9 | 18947 | 0.8 | DNMT3AP1 GC02P066729 |
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around DNMT3AP1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for DNMT3AP1 Gene
Genomic Locations for DNMT3AP1 Gene
- chr2:66,819,881-66,822,628
- (GRCh38/hg38)
- Size:
- 2,748 bases
- Orientation:
- Minus strand
- chr2:67,047,013-67,049,760
- (GRCh37/hg19)
Genomic View for DNMT3AP1 Gene
Genes around DNMT3AP1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 2p14 by Ensembl
- 2p14 by Entrez Gene
- 2p14 by HGNC
DNMT3AP1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DNMT3AP1 Gene
Proteins for DNMT3AP1 Gene
Post-translational modifications for DNMT3AP1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for DNMT3AP1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DNMT3AP1
- Origene Custom Protein Services for DNMT3AP1
- Search GeneTex for Proteins for DNMT3AP1
No data available for DME Specific Peptides for DNMT3AP1 Gene
Domains & Families for DNMT3AP1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DNMT3AP1 Gene
Function for DNMT3AP1 Gene
Phenotypes From GWAS Catalog for DNMT3AP1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Cyagen custom Knockout/knockin (KOKI) mouse models for DNMT3AP1
-
- Search ViGene Biosciences for DNMT3AP1
CRISPR Products
- Browse CRISPR knockouts for DNMT3AP1
- Applied Biological Materials CRISPR for DNMT3AP1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for DNMT3AP1
Inhibitory RNA Products
- Search ViGene Biosciences for DNMT3AP1
Clone Products
- GenScript: Custom all cDNA clones Services for DNMT3AP1
- VectorBuilder custom plasmid, inducible vectors for DNMT3AP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for DNMT3AP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for DNMT3AP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNMT3AP1 Gene
Localization for DNMT3AP1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DNMT3AP1 Gene
Transcripts for DNMT3AP1 Gene
mRNA/cDNA for DNMT3AP1 Gene
- (1) Ensembl transcripts including schematic representations, and UCSC links where relevant :
CRISPR Products
- Browse CRISPR knockouts for DNMT3AP1
- Applied Biological Materials CRISPR for DNMT3AP1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for DNMT3AP1
Inhibitory RNA Products
- Search ViGene Biosciences for DNMT3AP1
Clone Products
- GenScript: Custom all cDNA clones Services for DNMT3AP1
- VectorBuilder custom plasmid, inducible vectors for DNMT3AP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for DNMT3AP1
-
VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Applied Biological Materials Clones for DNMT3AP1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Expression for DNMT3AP1 Gene
NURSA nuclear receptor signaling pathways regulating expression of DNMT3AP1 Gene:
DNMT3AP1
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNMT3AP1 Gene
Orthologs for DNMT3AP1 Gene
No data available for Orthologs for DNMT3AP1 Gene
Paralogs for DNMT3AP1 Gene
No data available for Paralogs for DNMT3AP1 Gene
Variants for DNMT3AP1 Gene
Additional Variant Information for DNMT3AP1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- DNMT3AP1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DNMT3AP1 Gene
Disorders for DNMT3AP1 Gene
Additional Disease Information for DNMT3AP1
- Genetic Association Database
- (GAD)
No disorders were found for DNMT3AP1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNMT3AP1 Gene
Publications for DNMT3AP1 Gene
- Identification of 11 pseudogenes in the DNA methyltransferase gene family in rodents and humans and implications for the functional loci. (PMID: 15203217) Lees-Murdock DJ … Walsh CP (Genomics 2004) 2 3 58
- Genome-wide diet-gene interaction analyses for risk of colorectal cancer. (PMID: 24743840) Figueiredo JC … GECCO (PLoS genetics 2014) 3 58
- Decreased DNA methyltransferase 3A and 3B mRNA expression in peripheral blood mononuclear cells and increased plasma SAH concentration in adult patients with idiopathic thrombocytopenic purpura. (PMID: 18683034) Tao J … Yang R (Journal of clinical immunology 2008) 3 58
- Genome-wide association to body mass index and waist circumference: the Framingham Heart Study 100K project. (PMID: 17903300) Fox CS … Atwood LD (BMC medical genetics 2007) 44 58
- Framingham Heart Study genome-wide association: results for pulmonary function measures. (PMID: 17903307) Wilk JB … O'Connor GT (BMC medical genetics 2007) 44 58
Products for DNMT3AP1 Gene
- Browse R&D Systems for Antibodies
- Browse R&D Systems for Human Recombinant Proteins
- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
- Browse ELISAs
- Browse Activity Assays
- Browse cDNA Clones
- Browse Cell Culture Products
- Browse Cell Selection and Detection Kits
- Browse DNA Damage and Repair Kits
- Browse ELISpot/FluoroSpot Kits and Development Modules
- Browse Flow Cytometry Kits
- Browse Immunoprecipitation Assays
- Browse Luminex Assays
- Browse Peptides
- Browse Proteome Profiler Antibody Arrays
- Browse Small Molecules
- Browse OriGene Antibodies
- Custom Antibody Services
- Browse OriGene ELISA Kits
- Custom Assay Services
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DNMT3AP1
- Origene Custom Protein Services for DNMT3AP1
- Browse OriGene Inhibitory RNA Products For DNMT3AP1
- Browse OriGene qPCR primer pairs and template standards
- Browse CRISPR knockouts for DNMT3AP1
- Custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
- Browse OriGene miRNA Products For DNMT3AP1
- GenScript: Custom all cDNA clones Services for DNMT3AP1
- GenScript Custom Purified and Recombinant Proteins Services for DNMT3AP1
- GenScript Custom Assay Services for DNMT3AP1
- GenScript Custom overexpressing Cell Line Services for DNMT3AP1
- Browse GenScript CRISPR for DNMT3AP1
- Design optimal peptide antigens
- CloneReady with Over 120,000 Genes
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- Gene Mutant Library, Variants up to 10^11
- Plasmid Preparation
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- Browse Sino Biological cDNA Clones
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- Sino Biological Transfection Reagent
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- Novus Biologicals
- Novus Biologicals Tissue Microarrays
- Browse Antibodies at Cloud-Clone Corp.
- Browse Proteins at Cloud-Clone Corp.
- Browse Assay Kits at Cloud-Clone Corp.
- Browse Knockouts at Cloud-Clone Corp.
- Browse Knockins at Cloud-Clone Corp.
- Cloud-Clone Corp. disease models service
- Browse cDNA clones at Cloud-Clone Corp.
- Browse primers at Cloud-Clone Corp.
- Cloud-Clone Corp. primary cells service
- Cyagen custom Knockout/knockin (KOKI) mouse models for DNMT3AP1
- VectorBuilder custom plasmid, inducible vectors for DNMT3AP1
- VectorBuilder custom lentivirus, adenovirus, AAV vector/virus packaging for DNMT3AP1
- VectorBuilder Other custom vectors
- Mammalian expression: PiggyBac
- Mammalian Tet-on expression: plasmid
- Mammalian conditional (Cre-Lox): plasmid and PiggyBac
- Mammalian shRNA knockdown: lentiviral, adenoviral, AAV, and PiggyBac
- CRISPR: plasmid gRNA, lentiviral gRNA, and donor plasmid
- Bacterial expression: pET, pBAD, and pCS
- Yeast expression
- Search GeneTex for Antibodies for DNMT3AP1
- Search GeneTex for Proteins for DNMT3AP1
Sources for DNMT3AP1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew