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Aliases for DNM1P46 Gene

Aliases for DNM1P46 Gene

  • Dynamin 1 Pseudogene 46 2 3 5
  • DNM1 Pseudogene 46 2 3 4
  • C15orf51 3 4
  • Chromosome 15 Open Reading Frame 51 2
  • DNM1DN14.2 3
  • DNM1DN14@ 3

External Ids for DNM1P46 Gene

Previous HGNC Symbols for DNM1P46 Gene

  • DNM1DN14@
  • C15orf51

Previous GeneCards Identifiers for DNM1P46 Gene

  • GC15U900991
  • GC15M100336
  • GC15M100337
  • GC15M100382
  • GC15M100489
  • GC15M100542
  • GC15M100629

Summaries for DNM1P46 Gene

GeneCards Summary for DNM1P46 Gene

DNM1P46 (Dynamin 1 Pseudogene 46) is a Pseudogene. GO annotations related to this gene include GTPase activity.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNM1P46 Gene

Genomics for DNM1P46 Gene

Regulatory Elements for DNM1P46 Gene

Enhancers for DNM1P46 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH15G099925 1.1 Ensembl ENCODE 8 -120.6 -120625 4.2 PKNOX1 RB1 NFIB CREB3L1 SIN3A RAD21 ZBTB40 ZNF366 ZNF143 SP3 ENSG00000254744 DNM1P46 ADAMTS17 LOC105371022 GC15M100066
GH15G099731 1 ENCODE 8.6 +73.6 73649 4.0 HDGF ARNT SIN3A ZNF48 GLIS2 ELK1 ZNF207 SP3 SP5 NFYC LYSMD4 LRRC28 TTC23 DNM1P46 GC15M099683 ENSG00000201724
GH15G099863 0.5 ENCODE 9 -56.9 -56851 1.1 BCL6 ATF2 ZNF7 DNM1P46 LOC400464 GC15M100066 ENSG00000254744
GH15G099917 0.4 FANTOM5 9.9 -110.5 -110504 0.1 CBX3 DNM1P46 MEF2A ENSG00000254744 GC15M100066
GH15G099895 0.5 ENCODE 7.1 -89.3 -89338 0.6 ZNF146 CEBPA HNF4A EBF1 DNM1P46 GC15M100066 ENSG00000254744
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DNM1P46 on UCSC Golden Path with GeneCards custom track

Promoters for DNM1P46 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000081856 327 2001 BCOR JUND ATF3 MAX ZBTB33 HNF4A YY1 FOXA1

Genomic Location for DNM1P46 Gene

Chromosome:
15
Start:
99,790,156 bp from pter
End:
99,806,927 bp from pter
Size:
16,772 bases
Orientation:
Minus strand

Genomic View for DNM1P46 Gene

Genes around DNM1P46 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNM1P46 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNM1P46 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNM1P46 Gene

Proteins for DNM1P46 Gene

  • Protein details for DNM1P46 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6ZS02-DMP46_HUMAN
    Recommended name:
    Putative GED domain-containing protein DNM1P46
    Protein Accession:
    Q6ZS02
    Secondary Accessions:
    • Q3ZCN3

    Protein attributes for DNM1P46 Gene

    Size:
    220 amino acids
    Molecular mass:
    23740 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DNM1P46 Gene

Post-translational modifications for DNM1P46 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for DNM1P46 Gene

Domains & Families for DNM1P46 Gene

Protein Domains for DNM1P46 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for DNM1P46 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DNM1P46: view

No data available for Gene Families and UniProtKB/Swiss-Prot for DNM1P46 Gene

Function for DNM1P46 Gene

Gene Ontology (GO) - Molecular Function for DNM1P46 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003924 GTPase activity IBA --
GO:0008017 microtubule binding IBA --
genes like me logo Genes that share ontologies with DNM1P46: view
genes like me logo Genes that share phenotypes with DNM1P46: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNM1P46 Gene

Localization for DNM1P46 Gene

Gene Ontology (GO) - Cellular Components for DNM1P46 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0031966 mitochondrial membrane IBA --
genes like me logo Genes that share ontologies with DNM1P46: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Subcellular locations from COMPARTMENTS for DNM1P46 Gene

Pathways & Interactions for DNM1P46 Gene

SuperPathways for DNM1P46 Gene

No Data Available

Interacting Proteins for DNM1P46 Gene

Gene Ontology (GO) - Biological Process for DNM1P46 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000266 mitochondrial fission IBA --
GO:0003374 dynamin family protein polymerization involved in mitochondrial fission IBA --
GO:0061025 membrane fusion IBA --
genes like me logo Genes that share ontologies with DNM1P46: view

No data available for Pathways by source and SIGNOR curated interactions for DNM1P46 Gene

Drugs & Compounds for DNM1P46 Gene

No Compound Related Data Available

Transcripts for DNM1P46 Gene

mRNA/cDNA for DNM1P46 Gene

(1) REFSEQ mRNAs :
(9) Additional mRNA sequences :
(18) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNM1P46 Gene

DNM1 pseudogene 46:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DNM1P46 Gene

No ASD Table

Relevant External Links for DNM1P46 Gene

GeneLoc Exon Structure for
DNM1P46
ECgene alternative splicing isoforms for
DNM1P46

Expression for DNM1P46 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DNM1P46 Gene

mRNA differential expression in normal tissues according to GTEx for DNM1P46 Gene

This gene is overexpressed in Testis (x17.3).

Protein differential expression in normal tissues from HIPED for DNM1P46 Gene

This gene is overexpressed in Brain (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB and MOPED for DNM1P46 Gene



Protein tissue co-expression partners for DNM1P46 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of DNM1P46 Gene:

DNM1P46

SOURCE GeneReport for Unigene cluster for DNM1P46 Gene:

Hs.567763
genes like me logo Genes that share expression patterns with DNM1P46: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNM1P46 Gene

Orthologs for DNM1P46 Gene

Evolution for DNM1P46 Gene

ENSEMBL:
Gene Tree for DNM1P46 (if available)
TreeFam:
Gene Tree for DNM1P46 (if available)

No data available for Orthologs for DNM1P46 Gene

Paralogs for DNM1P46 Gene

(2) SIMAP similar genes for DNM1P46 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DNM1P46: view

No data available for Paralogs for DNM1P46 Gene

Variants for DNM1P46 Gene

Sequence variations from dbSNP and Humsavar for DNM1P46 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs1000051507 -- 99,807,823(+) CTCTG(C/T)CTCCC intron-variant, upstream-variant-2KB
rs1000642908 -- 99,791,390(+) TAGTG(G/T)GACTA nc-transcript-variant
rs1000717200 -- 99,795,660(+) ATCCA(C/T)AATAT intron-variant
rs1000769947 -- 99,795,926(+) AAAAA(A/C)TTTTG intron-variant
rs1000947026 -- 99,802,180(+) AAAAA(A/T)AATTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DNM1P46 Gene

Variant ID Type Subtype PubMed ID
dgv332n27 CNV gain 19166990
dgv333n27 CNV gain 19166990
dgv467e214 CNV gain 21293372
dgv468e214 CNV loss 21293372
dgv4769n54 CNV gain 21841781
dgv4770n54 CNV gain 21841781
esv1007601 CNV insertion 20482838
esv1013345 CNV insertion 17803354
esv1741156 CNV insertion 17803354
esv2007166 CNV deletion 18987734
esv26537 CNV gain+loss 19812545
esv2672431 CNV deletion 23128226
esv2674819 CNV deletion 23128226
esv2750117 CNV deletion 23290073
esv2750119 CNV deletion 23290073
esv2750120 CNV deletion 23290073
esv2750121 CNV deletion 23290073
esv2750122 CNV deletion 23290073
esv2760061 CNV gain 17122850
esv2760367 CNV gain 21179565
esv3637430 CNV gain 21293372
esv3637438 CNV loss 21293372
nsv1045838 CNV gain 25217958
nsv1070303 CNV deletion 25765185
nsv1113741 CNV deletion 24896259
nsv1141678 CNV deletion 24896259
nsv1146462 CNV deletion 26484159
nsv428313 CNV gain 18775914
nsv507797 OTHER sequence alteration 20534489
nsv522419 CNV loss 19592680
nsv984114 CNV duplication 23825009

Relevant External Links for DNM1P46 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNM1P46

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DNM1P46 Gene

Disorders for DNM1P46 Gene

Relevant External Links for DNM1P46

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DNM1P46

No disorders were found for DNM1P46 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNM1P46 Gene

Publications for DNM1P46 Gene

  1. A germline-specific class of small RNAs binds mammalian Piwi proteins. (PMID: 16751776) Girard A. … Carmell M.A. (Nature 2006) 3 64
  2. Analysis of the DNA sequence and duplication history of human chromosome 15. (PMID: 16572171) Zody M.C. … Nusbaum C. (Nature 2006) 4 64
  3. DNM1DN: a new class of paralogous genomic segments (duplicons) with highly conserved copies on chromosomes Y and 15. (PMID: 15008788) Makrinou E. … Edwards Y.H. (Ann. Hum. Genet. 2004) 3 64
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 4 64
  5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DNM1P46 Gene

Sources for DNM1P46 Gene

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