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Aliases for DNLZ Gene

Aliases for DNLZ Gene

  • DNL-Type Zinc Finger 2 3 5
  • Hsp70-Escort Protein 1 3 4
  • MtHsp70-Escort Protein 3 4
  • HSP70 Escort Protein 2 3
  • C9orf151 3 4
  • HEP1 3 4
  • Translocase Of Inner Mitochondrial Membrane 15 Homolog (Yeast) 2
  • Translocase Of Inner Mitochondrial Membrane 15 Homolog 3
  • Chromosome 9 Open Reading Frame 151 2
  • DNL-Type Zinc Finger Protein 3
  • RP11-413M3.2 3
  • BA413M3.2 3
  • TIMM15 3
  • ZIM17 3
  • HEP 3

External Ids for DNLZ Gene

Previous HGNC Symbols for DNLZ Gene

  • C9orf151

Previous GeneCards Identifiers for DNLZ Gene

  • GC09M138380
  • GC09M139253
  • GC09M108715

Summaries for DNLZ Gene

GeneCards Summary for DNLZ Gene

DNLZ (DNL-Type Zinc Finger) is a Protein Coding gene. GO annotations related to this gene include chaperone binding.

UniProtKB/Swiss-Prot for DNLZ Gene

  • May function as a co-chaperone towards HSPA9/mortalin which, by itself, is prone to self-aggregation.

Additional gene information for DNLZ Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNLZ Gene

Genomics for DNLZ Gene

Regulatory Elements for DNLZ Gene

Enhancers for DNLZ Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09H136398 1.6 FANTOM5 ENCODE dbSUPER 39.1 -36.0 -36011 3 HDGF ATF1 ARID4B SIN3A ETS1 ZNF766 ELK1 ZNF207 ZNF143 ATF7 INPP5E DNLZ ANAPC2 SDCCAG3 SEC16A SNAPC4 SNHG7 MAN1B1 CARD9 NDOR1
GH09H136353 1.3 Ensembl ENCODE dbSUPER 43.4 +9.3 9286 2 BCOR TBP PKNOX1 KLF1 MXI1 SAP130 ARID4B MAX KLF17 TEAD3 DNLZ INPP5E GPSM1
GH09H136358 1.1 ENCODE 44.9 +2.2 2210 5 HDGF MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF207 INPP5E DNLZ ANAPC2 MAN1B1 SNAPC4 SNHG7 NPDC1 SDCCAG3 CARD9 C9orf172
GH09H136370 1.2 Ensembl ENCODE 38.5 -8.7 -8727 3 ATF1 ARID4B SIN3A ZNF121 GLIS2 ZNF143 FOS ATF7 SP5 NFYC DNLZ INPP5E SNAPC4 SEC16A GC09M136338
GH09H136408 1.1 ENCODE 37 -46.6 -46642 3 HDGF MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 ZNF548 INPP5E DNLZ SEC16A SNAPC4 SDCCAG3 SNHG7 GPSM1 CARD9 ANAPC2 PIR36061
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DNLZ on UCSC Golden Path with GeneCards custom track

Promoters for DNLZ Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000243011 211 801 HDGF MLX ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 ZNF207

Genomic Location for DNLZ Gene

Chromosome:
9
Start:
136,359,480 bp from pter
End:
136,363,811 bp from pter
Size:
4,332 bases
Orientation:
Minus strand

Genomic View for DNLZ Gene

Genes around DNLZ on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNLZ Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNLZ Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNLZ Gene

Proteins for DNLZ Gene

  • Protein details for DNLZ Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5SXM8-DNLZ_HUMAN
    Recommended name:
    DNL-type zinc finger protein
    Protein Accession:
    Q5SXM8
    Secondary Accessions:
    • B2RUX5
    • B9EJE1

    Protein attributes for DNLZ Gene

    Size:
    178 amino acids
    Molecular mass:
    19204 Da
    Quaternary structure:
    • Oligomerizes in a concentration-dependent fashion. Interacts with HSPA9.

neXtProt entry for DNLZ Gene

Post-translational modifications for DNLZ Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for DNLZ Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DNLZ Gene

Domains & Families for DNLZ Gene

Gene Families for DNLZ Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for DNLZ Gene

Suggested Antigen Peptide Sequences for DNLZ Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DNLZ: view

No data available for UniProtKB/Swiss-Prot for DNLZ Gene

Function for DNLZ Gene

Molecular function for DNLZ Gene

UniProtKB/Swiss-Prot Function:
May function as a co-chaperone towards HSPA9/mortalin which, by itself, is prone to self-aggregation.

Phenotypes From GWAS Catalog for DNLZ Gene

Gene Ontology (GO) - Molecular Function for DNLZ Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008270 zinc ion binding IEA --
GO:0046872 metal ion binding IEA --
GO:0051087 chaperone binding IBA --
genes like me logo Genes that share ontologies with DNLZ: view

Phenotypes for DNLZ Gene

genes like me logo Genes that share phenotypes with DNLZ: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for DNLZ
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for DNLZ Gene

Localization for DNLZ Gene

Subcellular locations from UniProtKB/Swiss-Prot for DNLZ Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DNLZ gene
Compartment Confidence
mitochondrion 5
nucleus 5
cytosol 2

Subcellular locations from the

Human Protein Atlas (HPA)
  • Mitochondria (4)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for DNLZ Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005654 nucleoplasm IDA --
GO:0005739 mitochondrion IDA,IBA --
genes like me logo Genes that share ontologies with DNLZ: view

Pathways & Interactions for DNLZ Gene

No Data Available

Gene Ontology (GO) - Biological Process for DNLZ Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006457 protein folding IBA --
GO:0030150 protein import into mitochondrial matrix IBA --
GO:0050821 protein stabilization IBA --
genes like me logo Genes that share ontologies with DNLZ: view

No data available for Pathways by source and SIGNOR curated interactions for DNLZ Gene

Drugs & Compounds for DNLZ Gene

No Compound Related Data Available

Transcripts for DNLZ Gene

mRNA/cDNA for DNLZ Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNLZ Gene

DNL-type zinc finger:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Applied Biological Materials Clones for DNLZ
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for DNLZ Gene

No ASD Table

Relevant External Links for DNLZ Gene

GeneLoc Exon Structure for
DNLZ
ECgene alternative splicing isoforms for
DNLZ

Expression for DNLZ Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DNLZ Gene

Protein differential expression in normal tissues from HIPED for DNLZ Gene

This gene is overexpressed in Heart (14.1), Peripheral blood mononuclear cells (12.5), Bone marrow stromal cell (10.8), and CD8 Tcells (7.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for DNLZ Gene



Protein tissue co-expression partners for DNLZ Gene

NURSA nuclear receptor signaling pathways regulating expression of DNLZ Gene:

DNLZ

SOURCE GeneReport for Unigene cluster for DNLZ Gene:

Hs.528581

Evidence on tissue expression from TISSUES for DNLZ Gene

  • Liver(4.1)
  • Nervous system(4.1)
genes like me logo Genes that share expression patterns with DNLZ: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNLZ Gene

Orthologs for DNLZ Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for DNLZ Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DNLZ 33 34
  • 98.88 (n)
cow
(Bos Taurus)
Mammalia DNLZ 33 34
  • 81.85 (n)
dog
(Canis familiaris)
Mammalia DNLZ 33 34
  • 81.85 (n)
mouse
(Mus musculus)
Mammalia Dnlz 33 16 34
  • 80.28 (n)
rat
(Rattus norvegicus)
Mammalia Dnlz 33
  • 77.07 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia DNLZ 34
  • 59 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia DNLZ 34
  • 36 (a)
OneToOne
chicken
(Gallus gallus)
Aves DNLZ 33 34
  • 69.94 (n)
lizard
(Anolis carolinensis)
Reptilia DNLZ 34
  • 69 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia dnlz 33
  • 57.68 (n)
zebrafish
(Danio rerio)
Actinopterygii dnlz 34
  • 41 (a)
OneToOne
fruit fly
(Drosophila melanogaster)
Insecta CG12379 34
  • 36 (a)
OneToMany
CG8206 34
  • 21 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea F53A3.7 34
  • 46 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ZIM17 34 36
  • 25 (a)
OneToOne
Species where no ortholog for DNLZ was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for DNLZ Gene

ENSEMBL:
Gene Tree for DNLZ (if available)
TreeFam:
Gene Tree for DNLZ (if available)

Paralogs for DNLZ Gene

No data available for Paralogs for DNLZ Gene

Variants for DNLZ Gene

Sequence variations from dbSNP and Humsavar for DNLZ Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs138344913 Likely benign 136,365,192(+) TGTTT(A/C/T)GGGCT upstream-variant-2KB, reference, synonymous-codon
rs373574599 Uncertain significance 136,364,058(+) CCTGA(A/C)GTTAC upstream-variant-2KB, utr-variant-3-prime
rs373635926 Uncertain significance 136,365,182(+) TGCAA(A/G)GGGCT upstream-variant-2KB, reference, missense
rs545913331 Uncertain significance 136,364,172(+) CAGGG(C/T)ACCAG intron-variant, upstream-variant-2KB, utr-variant-3-prime
rs564615796 Uncertain significance 136,364,163(+) TGGGC(C/T)TTTCA upstream-variant-2KB, utr-variant-3-prime, splice-acceptor-variant

Structural Variations from Database of Genomic Variants (DGV) for DNLZ Gene

Variant ID Type Subtype PubMed ID
esv2759720 CNV loss 17122850
nsv1046074 CNV gain 25217958
nsv469918 CNV loss 18288195
nsv509333 CNV insertion 20534489
nsv615962 CNV loss 21841781
nsv6764 CNV deletion 18451855
nsv825173 CNV gain 20364138
nsv951202 CNV deletion 24416366

Variation tolerance for DNLZ Gene

Residual Variation Intolerance Score: 94% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 5.03; 68.57% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DNLZ Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNLZ

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DNLZ Gene

Disorders for DNLZ Gene

Relevant External Links for DNLZ

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DNLZ

No disorders were found for DNLZ Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNLZ Gene

Publications for DNLZ Gene

  1. Structural and stability studies of the human mtHsp70-escort protein 1: an essential mortalin co-chaperone. (PMID: 23462535) Dores-Silva PR … Borges JC (International journal of biological macromolecules 2013) 3 4 60
  2. The DNLZ/HEP zinc-binding subdomain is critical for regulation of the mitochondrial chaperone HSPA9. (PMID: 22162012) Vu MT … Silberg JJ (Protein science : a publication of the Protein Society 2012) 2 3 60
  3. A conserved histidine in human DNLZ/HEP is required for stimulation of HSPA9 ATPase activity. (PMID: 21530495) Zhai P … Silberg JJ (Biochemical and biophysical research communications 2011) 2 3 60
  4. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3 60

Products for DNLZ Gene

Sources for DNLZ Gene

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