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Aliases for DNAJC9 Gene

Aliases for DNAJC9 Gene

  • DnaJ (Hsp40) Homolog, Subfamily C, Member 9 2 3
  • DnaJ Protein SB73 3 4
  • JDD1 3 6
  • DnaJ Homolog Subfamily C Member 9 3
  • KIAA0974 6
  • HDJC9 3
  • SB73 3

External Ids for DNAJC9 Gene

Previous GeneCards Identifiers for DNAJC9 Gene

  • GC10P073706
  • GC10P074031
  • GC10M074836
  • GC10M074348
  • GC10M074350
  • GC10M074673
  • GC10M074676
  • GC10M074943
  • GC10M068996

Summaries for DNAJC9 Gene

GeneCards Summary for DNAJC9 Gene

DNAJC9 (DnaJ (Hsp40) Homolog, Subfamily C, Member 9) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAJC9 Gene

Genomics for DNAJC9 Gene

Regulatory Elements for DNAJC9 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for DNAJC9 Gene

Start:
73,183,362 bp from pter
End:
73,249,226 bp from pter
Size:
65,865 bases
Orientation:
Minus strand

Genomic View for DNAJC9 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DNAJC9 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAJC9 Gene

Proteins for DNAJC9 Gene

  • Protein details for DNAJC9 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8WXX5-DNJC9_HUMAN
    Recommended name:
    DnaJ homolog subfamily C member 9
    Protein Accession:
    Q8WXX5
    Secondary Accessions:
    • B2RMW6

    Protein attributes for DNAJC9 Gene

    Size:
    260 amino acids
    Molecular mass:
    29910 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DNAJC9 Gene

Proteomics data for DNAJC9 Gene at MOPED

Post-translational modifications for DNAJC9 Gene

  • Ubiquitination at Lys107 and Lys217
  • Modification sites at PhosphoSitePlus

Other Protein References for DNAJC9 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DNAJC9 Gene

Domains for DNAJC9 Gene

Gene Families for DNAJC9 Gene

HGNC:
  • DNAJ :Heat shock proteins / DNAJ (HSP40)

Protein Domains for DNAJC9 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for DNAJC9 Gene

Graphical View of Domain Structure for InterPro Entry

Q8WXX5

UniProtKB/Swiss-Prot:

DNJC9_HUMAN :
  • Q8WXX5
Domain:
  • Contains 1 J domain.
genes like me logo Genes that share domains with DNAJC9: view

Function for DNAJC9 Gene

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , Transcription Factor Targeting and HOMER Transcription for DNAJC9 Gene

Localization for DNAJC9 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DNAJC9 Gene COMPARTMENTS Subcellular localization image for DNAJC9 gene
Compartment Confidence
cytosol 3
nucleus 2
plasma membrane 1

Gene Ontology (GO) - Cellular Components for DNAJC9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IDA 21630459
genes like me logo Genes that share ontologies with DNAJC9: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for DNAJC9 Gene

Pathways for DNAJC9 Gene

SuperPathways for DNAJC9 Gene

No Data Available

PCR Array Products

  • Pathway & Disease-focused RT² Profiler PCR Arrays

Gene Ontology (GO) - Biological Process for DNAJC9 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0035176 social behavior IEP 21531385
genes like me logo Genes that share ontologies with DNAJC9: view

No data available for Pathways by source for DNAJC9 Gene

Transcripts for DNAJC9 Gene

mRNA/cDNA for DNAJC9 Gene

Unigene Clusters for DNAJC9 Gene

DnaJ (Hsp40) homolog, subfamily C, member 9:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for DNAJC9

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for DNAJC9
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for DNAJC9 Gene

No ASD Table

Relevant External Links for DNAJC9 Gene

GeneLoc Exon Structure for
DNAJC9
ECgene alternative splicing isoforms for
DNAJC9

Expression for DNAJC9 Gene

mRNA expression in normal human tissues for DNAJC9 Gene

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for DNAJC9 Gene

SOURCE GeneReport for Unigene cluster for DNAJC9 Gene Hs.732485

genes like me logo Genes that share expressions with DNAJC9: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for DNAJC9 Gene

Orthologs for DNAJC9 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for DNAJC9 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DNAJC9 36
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia DNAJC9 35
  • 90.93 (n)
  • 94 (a)
DNAJC9 36
  • 93 (a)
OneToOne
dog
(Canis familiaris)
Mammalia DNAJC9 35
  • 89.56 (n)
  • 93.57 (a)
DNAJC9 36
  • 94 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Dnajc9 35
  • 86.83 (n)
  • 88.48 (a)
Dnajc9 16
Dnajc9 36
  • 88 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia DNAJC9 36
  • 78 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia DNAJC9 36
  • 73 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Dnajc9 35
  • 86.28 (n)
  • 90.53 (a)
chicken
(Gallus gallus)
Aves DNAJC9 35
  • 71.49 (n)
  • 73.14 (a)
DNAJC9 36
  • 72 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia DNAJC9 36
  • 72 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.24030 35
tropical clawed frog
(Silurana tropicalis)
Amphibia dnajc9 35
  • 67.22 (n)
  • 66.12 (a)
MGC76175 35
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.3259 35
zebrafish
(Danio rerio)
Actinopterygii dnajc9 35
  • 61.11 (n)
  • 60.83 (a)
dnajc9 36
  • 60 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP004849 35
  • 51.36 (n)
  • 42.49 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG6693 35
  • 52.42 (n)
  • 40.25 (a)
CG6693 36
  • 34 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea dnj-23 35
  • 47.66 (n)
  • 38.16 (a)
dnj-23 36
  • 37 (a)
OneToOne
thale cress
(Arabidopsis thaliana)
eudicotyledons AT3G12170 35
  • 48.86 (n)
  • 42.65 (a)
rice
(Oryza sativa)
Liliopsida Os02g0195800 35
  • 45.22 (n)
  • 37.96 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes SPAC1071.09c 35
  • 49.47 (n)
  • 42.92 (a)
Species with no ortholog for DNAJC9:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for DNAJC9 Gene

ENSEMBL:
Gene Tree for DNAJC9 (if available)
TreeFam:
Gene Tree for DNAJC9 (if available)

Paralogs for DNAJC9 Gene

Pseudogenes.org Pseudogenes for DNAJC9 Gene

genes like me logo Genes that share paralogs with DNAJC9: view

No data available for Paralogs for DNAJC9 Gene

Variants for DNAJC9 Gene

Sequence variations from dbSNP and Humsavar for DNAJC9 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type MAF
rs7100458 -- 73,243,335(+) AAATC(C/T)TGCCT intron-variant
rs11000562 -- 73,244,457(+) tgcct(C/T)tgcac intron-variant
rs12246048 -- 73,243,197(+) GGTGA(A/G)ACCTC utr-variant-3-prime, intron-variant
rs12246107 -- 73,243,288(+) GGCTG(C/G)AAAGA utr-variant-3-prime, intron-variant
rs12250119 -- 73,245,317(+) ACGCC(C/T)GATGA intron-variant

Relevant External Links for DNAJC9 Gene

HapMap Linkage Disequilibrium report
DNAJC9

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for DNAJC9 Gene

Disorders for DNAJC9 Gene

(1) University of Copenhagen DISEASES for DNAJC9 Gene

Relevant External Links for DNAJC9

Genetic Association Database (GAD)
DNAJC9
Human Genome Epidemiology (HuGE) Navigator
DNAJC9
genes like me logo Genes that share disorders with DNAJC9: view

No data available for UniProtKB/Swiss-Prot for DNAJC9 Gene

Publications for DNAJC9 Gene

  1. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 48
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. HDJC9, a novel human type C DnaJ/HSP40 member interacts with and cochaperones HSP70 through the J domain. (PMID: 17182002) Han C. … Cao X. (Biochem. Biophys. Res. Commun. 2007) 3
  4. Centromere-specific assembly of CENP-A nucleosomes is mediated by HJURP. (PMID: 19410544) Foltz D.R. … Cleveland D.W. (Cell 2009) 3
  5. The metastasis efficiency modifier ribosomal RNA processing 1 homolog B (RRP1B) is a chromatin-associated factor. (PMID: 19710015) Crawford N.P. … Hunter K.W. (J. Biol. Chem. 2009) 3

Products for DNAJC9 Gene

Sources for DNAJC9 Gene

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