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Aliases for DNAJC3-AS1 Gene

Subcategory (RNA class) for DNAJC3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DNAJC3-AS1 Gene

  • DNAJC3 Antisense RNA 1 (Head To Head) 2 3 5
  • DNAJC3 Antisense RNA 1 (Non-Protein Coding) 2
  • DNAJC3 Antisense RNA 1 2

External Ids for DNAJC3-AS1 Gene

Previous GeneCards Identifiers for DNAJC3-AS1 Gene

  • GC13M096326
  • GC13M096300

Summaries for DNAJC3-AS1 Gene

GeneCards Summary for DNAJC3-AS1 Gene

DNAJC3-AS1 (DNAJC3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAJC3-AS1 Gene

Genomics for DNAJC3-AS1 Gene

Regulatory Elements for DNAJC3-AS1 Gene

Enhancers for DNAJC3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F095641 0.5 ENCODE 18.7 +35.1 35130 1.2 MXI1 RFX1 SAP130 MLX NRF1 ARID4B YY1 RFX3 GABPB1 HNF4G DNAJC3-AS1 DNAJC3 DZIP1 GC13M095581
GH13F095656 0.2 ENCODE 12.1 +20.1 20139 1.4 ARID1B PKNOX1 MTA2 NCOR1 PBX2 TAL1 TRIM24 DNAJC3 DNAJC3-AS1 CLDN10 DZIP1
GH13F095698 1.2 Ensembl 11.6 -21.7 -21741 1.0 CTCF HLF FOXA3 CEBPA CEBPB CEBPG ZNF600 DNAJC3 DNAJC3-AS1 MTCYBP3 PIR47331
GH13F095703 0.5 Ensembl 11.6 -26.5 -26541 0.2 FEZF1 DNAJC3 DNAJC3-AS1 MTCYBP3 PIR47331
GH13F095700 0.8 Ensembl 11.3 -24.0 -24041 0.8 UGGT2 DNAJC3 DNAJC3-AS1 MTCYBP3 PIR47331
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DNAJC3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DNAJC3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001511508 -140 4201 PKNOX1 CREB3L1 WRNIP1 ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 SLC30A9

Genomic Location for DNAJC3-AS1 Gene

Chromosome:
13
Start:
95,648,733 bp from pter
End:
95,676,960 bp from pter
Size:
28,228 bases
Orientation:
Minus strand

Genomic View for DNAJC3-AS1 Gene

Genes around DNAJC3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNAJC3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNAJC3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAJC3-AS1 Gene

Proteins for DNAJC3-AS1 Gene

Post-translational modifications for DNAJC3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DNAJC3-AS1 Gene

Domains & Families for DNAJC3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DNAJC3-AS1 Gene

Function for DNAJC3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNAJC3-AS1 Gene

Localization for DNAJC3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DNAJC3-AS1 Gene

Pathways & Interactions for DNAJC3-AS1 Gene

SuperPathways for DNAJC3-AS1 Gene

No Data Available

Interacting Proteins for DNAJC3-AS1 Gene

Gene Ontology (GO) - Biological Process for DNAJC3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DNAJC3-AS1 Gene

Transcripts for DNAJC3-AS1 Gene

mRNA/cDNA for DNAJC3-AS1 Gene

(5) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNAJC3-AS1 Gene

DNAJC3 antisense RNA 1 (head to head):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DNAJC3-AS1 Gene

No ASD Table

Relevant External Links for DNAJC3-AS1 Gene

GeneLoc Exon Structure for
DNAJC3-AS1
ECgene alternative splicing isoforms for
DNAJC3-AS1

Expression for DNAJC3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DNAJC3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DNAJC3-AS1 Gene

This gene is overexpressed in Pituitary (x4.1).

SOURCE GeneReport for Unigene cluster for DNAJC3-AS1 Gene:

Hs.594844
genes like me logo Genes that share expression patterns with DNAJC3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DNAJC3-AS1 Gene

Orthologs for DNAJC3-AS1 Gene

Evolution for DNAJC3-AS1 Gene

ENSEMBL:
Gene Tree for DNAJC3-AS1 (if available)
TreeFam:
Gene Tree for DNAJC3-AS1 (if available)

No data available for Orthologs for DNAJC3-AS1 Gene

Paralogs for DNAJC3-AS1 Gene

No data available for Paralogs for DNAJC3-AS1 Gene

Variants for DNAJC3-AS1 Gene

Sequence variations from dbSNP and Humsavar for DNAJC3-AS1 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs111419724 -- 95,676,974(+) CTATC(A/G)GGGAC upstream-variant-2KB
rs112888494 -- 95,678,461(+) TTGAA(A/C)CCCAA intron-variant, upstream-variant-2KB
rs113325308 -- 95,674,620(+) CCAAA(A/G)CGCTA nc-transcript-variant
rs116882602 -- 95,674,197(+) CCTCA(G/T)ATTGG nc-transcript-variant
rs117853092 -- 95,672,658(+) TTTAT(C/T)GGAAA downstream-variant-500B

Relevant External Links for DNAJC3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNAJC3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DNAJC3-AS1 Gene

Disorders for DNAJC3-AS1 Gene

Relevant External Links for DNAJC3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DNAJC3-AS1

No disorders were found for DNAJC3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNAJC3-AS1 Gene

Publications for DNAJC3-AS1 Gene

No publications were found for DNAJC3-AS1 Gene.

Products for DNAJC3-AS1 Gene

Sources for DNAJC3-AS1 Gene

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