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Aliases for DNAJC27-AS1 Gene

Subcategory (RNA class) for DNAJC27-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for DNAJC27-AS1 Gene

  • DNAJC27 Antisense RNA 1 2 3
  • DNAJC27 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DNAJC27-AS1 Gene

ORGUL Members for DNAJC27-AS1 Gene

Previous GeneCards Identifiers for DNAJC27-AS1 Gene

  • GC02P025196

Summaries for DNAJC27-AS1 Gene

GeneCards Summary for DNAJC27-AS1 Gene

DNAJC27-AS1 (DNAJC27 Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAJC27-AS1 Gene

Genomics for DNAJC27-AS1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for DNAJC27-AS1 Gene

Start:
24,971,390 bp from pter
End:
25,039,694 bp from pter
Size:
68,305 bases
Orientation:
Plus strand

Genomic View for DNAJC27-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DNAJC27-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAJC27-AS1 Gene

No data available for Regulatory Elements for DNAJC27-AS1 Gene

Proteins for DNAJC27-AS1 Gene

Post-translational modifications for DNAJC27-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DNAJC27-AS1 Gene

Domains for DNAJC27-AS1 Gene

Gene Families for DNAJC27-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DNAJC27-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DNAJC27-AS1 Gene

Function for DNAJC27-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DNAJC27-AS1 Gene

Localization for DNAJC27-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DNAJC27-AS1 Gene

Pathways for DNAJC27-AS1 Gene

SuperPathways for DNAJC27-AS1 Gene

No Data Available

Interacting Proteins for DNAJC27-AS1 Gene

Gene Ontology (GO) - Biological Process for DNAJC27-AS1 Gene

None

No data available for Pathways by source for DNAJC27-AS1 Gene

Transcripts for DNAJC27-AS1 Gene

mRNA/cDNA for DNAJC27-AS1 Gene

(4) Additional mRNA sequences :
(8) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNAJC27-AS1 Gene

DNAJC27 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DNAJC27-AS1 Gene

No ASD Table

Relevant External Links for DNAJC27-AS1 Gene

GeneLoc Exon Structure for
DNAJC27-AS1
ECgene alternative splicing isoforms for
DNAJC27-AS1

Expression for DNAJC27-AS1 Gene

mRNA expression in normal human tissues for DNAJC27-AS1 Gene

SOURCE GeneReport for Unigene cluster for DNAJC27-AS1 Gene Hs.436366

genes like me logo Genes that share expressions with DNAJC27-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for DNAJC27-AS1 Gene

Orthologs for DNAJC27-AS1 Gene

Evolution for DNAJC27-AS1 Gene

ENSEMBL:
Gene Tree for DNAJC27-AS1 (if available)
TreeFam:
Gene Tree for DNAJC27-AS1 (if available)

No data available for Orthologs for DNAJC27-AS1 Gene

Paralogs for DNAJC27-AS1 Gene

No data available for Paralogs for DNAJC27-AS1 Gene

Variants for DNAJC27-AS1 Gene

Sequence variations from dbSNP and Humsavar for DNAJC27-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs873215 -- 25,035,756(+) TCCCG(C/T)GGCAG nc-transcript-variant
rs893588 -- 25,036,651(-) GTAAA(G/T)GTGGT nc-transcript-variant
rs893589 -- 25,036,573(-) CCATA(C/T)GAACT nc-transcript-variant
rs893590 -- 25,033,579(-) GAACA(C/T)ATTTC intron-variant
rs893591 -- 25,033,338(-) AGGCT(A/C/T)CTTTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DNAJC27-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2552379 CNV Deletion 19546169
esv2106301 CNV Deletion 18987734
esv3594 CNV Deletion 18987735
esv2719822 CNV Deletion 23290073
esv8717 CNV Loss 19470904
esv1663408 CNV Deletion 17803354
esv2678097 CNV Deletion 23128226

Relevant External Links for DNAJC27-AS1 Gene

HapMap Linkage Disequilibrium report
DNAJC27-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DNAJC27-AS1 Gene

Disorders for DNAJC27-AS1 Gene

No disorders were found for DNAJC27-AS1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for DNAJC27-AS1 Gene

Publications for DNAJC27-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for DNAJC27-AS1 Gene

Sources for DNAJC27-AS1 Gene

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