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Aliases for DNAJC11 Gene

Aliases for DNAJC11 Gene

  • DnaJ Heat Shock Protein Family (Hsp40) Member C11 2 3 5
  • DnaJ (Hsp40) Homolog, Subfamily C, Member 11 2 3
  • Novel DnaJ Domain-Containing Protein 3
  • DJ126A5.1 3

External Ids for DNAJC11 Gene

Previous GeneCards Identifiers for DNAJC11 Gene

  • GC01M006404
  • GC01M006628
  • GC01M005841
  • GC01M006694

Summaries for DNAJC11 Gene

GeneCards Summary for DNAJC11 Gene

DNAJC11 (DnaJ Heat Shock Protein Family (Hsp40) Member C11) is a Protein Coding gene.

Gene Wiki entry for DNAJC11 Gene

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAJC11 Gene

Genomics for DNAJC11 Gene

Regulatory Elements for DNAJC11 Gene

Enhancers for DNAJC11 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around DNAJC11 on UCSC Golden Path with GeneCards custom track

Promoters for DNAJC11 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around DNAJC11 on UCSC Golden Path with GeneCards custom track

Genomic Location for DNAJC11 Gene

Chromosome:
1
Start:
6,634,168 bp from pter
End:
6,701,924 bp from pter
Size:
67,757 bases
Orientation:
Minus strand

Genomic View for DNAJC11 Gene

Genes around DNAJC11 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNAJC11 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNAJC11 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAJC11 Gene

Proteins for DNAJC11 Gene

  • Protein details for DNAJC11 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NVH1-DJC11_HUMAN
    Recommended name:
    DnaJ homolog subfamily C member 11
    Protein Accession:
    Q9NVH1
    Secondary Accessions:
    • Q4VWF5
    • Q5VZN0
    • Q6PK20
    • Q6PK70
    • Q8NDM2
    • Q96CL7

    Protein attributes for DNAJC11 Gene

    Size:
    559 amino acids
    Molecular mass:
    63278 Da
    Quaternary structure:
    • Associates with the mitochondrial contact site and cristae organizing system (MICOS) complex, composed of at least MINOS1/MIC10, CHCHD3/MIC19, CHCHD6/MIC25, APOOL/MIC27, IMMT/MIC60, APOO/MIC23/MIC26 and QIL1/MIC13. This complex was also known under the names MINOS or MitOS complex. The MICOS complex associates with mitochondrial outer membrane proteins SAMM50, MTX1, MTX2 and DNAJC11, mitochondrial inner membrane protein TMEM11 and with HSPA9.
    SequenceCaution:
    • Sequence=AAH08772.1; Type=Erroneous initiation; Evidence={ECO:0000305};

    Alternative splice isoforms for DNAJC11 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DNAJC11 Gene

Proteomics data for DNAJC11 Gene at MOPED

Post-translational modifications for DNAJC11 Gene

  • Ubiquitination at Lys 83, Lys 264, and Lys 409
  • Modification sites at PhosphoSitePlus

Other Protein References for DNAJC11 Gene

No data available for DME Specific Peptides for DNAJC11 Gene

Domains & Families for DNAJC11 Gene

Gene Families for DNAJC11 Gene

Protein Domains for DNAJC11 Gene

Graphical View of Domain Structure for InterPro Entry

Q9NVH1

UniProtKB/Swiss-Prot:

DJC11_HUMAN :
  • Contains 1 J domain.
  • Belongs to the DNAJC11 family.
Domain:
  • Contains 1 J domain.
Family:
  • Belongs to the DNAJC11 family.
genes like me logo Genes that share domains with DNAJC11: view

Function for DNAJC11 Gene

genes like me logo Genes that share phenotypes with DNAJC11: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for DNAJC11 Gene

Localization for DNAJC11 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DNAJC11 Gene

Mitochondrion.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DNAJC11 Gene COMPARTMENTS Subcellular localization image for DNAJC11 gene
Compartment Confidence
extracellular 5
mitochondrion 5
cytosol 4
nucleus 2

Gene Ontology (GO) - Cellular Components for DNAJC11 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005743 mitochondrial inner membrane IEA --
GO:0070062 extracellular exosome IDA 23376485
genes like me logo Genes that share ontologies with DNAJC11: view

Pathways & Interactions for DNAJC11 Gene

SuperPathways for DNAJC11 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DNAJC11 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DNAJC11 Gene

Drugs & Compounds for DNAJC11 Gene

No Compound Related Data Available

Transcripts for DNAJC11 Gene

Unigene Clusters for DNAJC11 Gene

DnaJ (Hsp40) homolog, subfamily C, member 11:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DNAJC11 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5a · 5b ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11a · 11b ^ 12 ^ 13a · 13b ^ 14 ^ 15 ^ 16 ^ 17a · 17b
SP1: -
SP2: -
SP3: -
SP4:
SP5: -
SP6:
SP7:
SP8:

Relevant External Links for DNAJC11 Gene

GeneLoc Exon Structure for
DNAJC11
ECgene alternative splicing isoforms for
DNAJC11

Expression for DNAJC11 Gene

mRNA expression in normal human tissues for DNAJC11 Gene

Protein differential expression in normal tissues from HIPED for DNAJC11 Gene

This gene is overexpressed in Nasal epithelium (28.3).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MOPED, and MaxQB for DNAJC11 Gene



SOURCE GeneReport for Unigene cluster for DNAJC11 Gene Hs.462640

genes like me logo Genes that share expression patterns with DNAJC11: view

Protein tissue co-expression partners for DNAJC11 Gene

- Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for DNAJC11 Gene

Orthologs for DNAJC11 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for DNAJC11 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia DNAJC11 35
  • 88.67 (n)
  • 96.42 (a)
DNAJC11 36
  • 96 (a)
OneToOne
dog
(Canis familiaris)
Mammalia DNAJC11 35
  • 90.76 (n)
  • 97.67 (a)
DNAJC11 36
  • 98 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Dnajc11 35
  • 89.03 (n)
  • 96.6 (a)
Dnajc11 16
Dnajc11 36
  • 97 (a)
OneToOne
chimpanzee
(Pan troglodytes)
Mammalia DNAJC11 35
  • 98.41 (n)
  • 98.35 (a)
DNAJC11 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Dnajc11 35
  • 88.13 (n)
  • 95.71 (a)
oppossum
(Monodelphis domestica)
Mammalia DNAJC11 36
  • 95 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 96 (a)
OneToMany
-- 36
  • 90 (a)
OneToMany
chicken
(Gallus gallus)
Aves DNAJC11 35
  • 82.53 (n)
  • 92.13 (a)
DNAJC11 36
  • 92 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia DNAJC11 36
  • 78 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia dnajc11 35
  • 78.65 (n)
  • 87.84 (a)
zebrafish
(Danio rerio)
Actinopterygii dnajc11 35
  • 74.91 (n)
  • 82.8 (a)
Dr.9382 35
dnajc11 36
  • 82 (a)
OneToMany
DNAJC11 (2 of 2) 36
  • 78 (a)
OneToMany
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.2822 35
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP010432 35
  • 51.98 (n)
  • 50.09 (a)
fruit fly
(Drosophila melanogaster)
Insecta CG8531 35
  • 52.29 (n)
  • 45.01 (a)
CG8531 36
  • 44 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea dnj-9 35
  • 41.68 (n)
  • 33.15 (a)
dnj-9 36
  • 30 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes APJ1 36
  • 16 (a)
OneToMany
SCJ1 36
  • 24 (a)
OneToMany
XDJ1 36
  • 19 (a)
OneToMany
thale cress
(Arabidopsis thaliana)
eudicotyledons OWL1 35
  • 44.77 (n)
  • 33.14 (a)
rice
(Oryza sativa)
Liliopsida Os10g0507800 35
  • 44.47 (n)
  • 34.16 (a)
sea squirt
(Ciona savignyi)
Ascidiacea CSA.9399 36
  • 43 (a)
OneToOne
Species with no ortholog for DNAJC11:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for DNAJC11 Gene

ENSEMBL:
Gene Tree for DNAJC11 (if available)
TreeFam:
Gene Tree for DNAJC11 (if available)

Paralogs for DNAJC11 Gene

(3) SIMAP similar genes for DNAJC11 Gene using alignment to 6 proteins:

genes like me logo Genes that share paralogs with DNAJC11: view

No data available for Paralogs for DNAJC11 Gene

Variants for DNAJC11 Gene

Sequence variations from dbSNP and Humsavar for DNAJC11 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs12137794 - 6,645,884(+) GCCCA(C/T)GGTGT reference, missense
rs200454 -, - 6,645,814(+) GGCTG(C/G)TTTTA reference, missense
rs149856 -- 6,675,204(-) TCGGA(G/T)ATGTA intron-variant
rs149857 -- 6,663,124(-) CATCA(C/G)CATGG intron-variant
rs156984 -- 6,695,942(+) CTATC(A/C)CATTG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DNAJC11 Gene

Variant ID Type Subtype PubMed ID
dgv129n71 CNV Loss 21882294
nsv871348 CNV Gain 21882294
nsv437199 CNV Loss 16327808
esv2640779 CNV Deletion 19546169
esv2237641 CNV Deletion 18987734
nsv1298 CNV Insertion 18451855
nsv525013 CNV Loss 19592680

Variation tolerance for DNAJC11 Gene

Residual Variation Intolerance Score: 13.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 7.21; 80.97% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DNAJC11 Gene

HapMap Linkage Disequilibrium report
DNAJC11

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DNAJC11 Gene

Disorders for DNAJC11 Gene

Relevant External Links for DNAJC11

Genetic Association Database (GAD)
DNAJC11
Human Genome Epidemiology (HuGE) Navigator
DNAJC11
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DNAJC11

No disorders were found for DNAJC11 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNAJC11 Gene

Publications for DNAJC11 Gene

  1. Identification and characterization of FLJ10737 and CAMTA1 genes on the commonly deleted region of neuroblastoma at human chromosome 1p36.31-p36.23. (PMID: 12964007) Katoh M. … Katoh M. (Int. J. Oncol. 2003) 2 3 23 67
  2. Allelic variants of CAMTA1 and FLJ10737 within a commonly deleted region at 1p36 in neuroblastoma. (PMID: 17222547) Henrich K.-O. … Westermann F. (Eur. J. Cancer 2007) 3 23
  3. Temporal proteomics of NGF-TrkA signaling identifies an inhibitory role for the E3 ligase Cbl-b in neuroblastoma cell differentiation. (PMID: 25921289) Emdal K.B. … Olsen J.V. (Sci Signal 2015) 3
  4. QIL1 is a novel mitochondrial protein required for MICOS complex stability and cristae morphology. (PMID: 25997101) Guarani V. … Harper J.W. (Elife 2015) 3
  5. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3

Products for DNAJC11 Gene

Sources for DNAJC11 Gene

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