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Aliases for DNAH17-AS1 Gene

Subcategory (RNA class) for DNAH17-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DNAH17-AS1 Gene

  • DNAH17 Antisense RNA 1 2 3 5

External Ids for DNAH17-AS1 Gene

Previous GeneCards Identifiers for DNAH17-AS1 Gene

  • GC17P076494

Summaries for DNAH17-AS1 Gene

GeneCards Summary for DNAH17-AS1 Gene

DNAH17-AS1 (DNAH17 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAH17-AS1 Gene

Genomics for DNAH17-AS1 Gene

Regulatory Elements for DNAH17-AS1 Gene

Enhancers for DNAH17-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G078484 1.4 FANTOM5 ENCODE dbSUPER 0.7 +0.1 97 1.8 HDGF SREBF2 SIN3A ZNF121 ZNF143 ZNF207 ETV6 RELB CREM IKZF2 RNU6-638P TMEM235 DNAH17-AS1 GC17P078493
GH17G078441 1.8 FANTOM5 Ensembl ENCODE dbSUPER 0.3 -42.0 -42034 2.4 HDGF ATF1 BRCA1 RARA ZNF121 FOS CREM CEBPB PRDM6 ZSCAN16 PGS1 DNAH17 SOCS3 RNU6-638P C1QTNF1-AS1 CYTH1 USP36 TMC6 GC17M078388 DNAH17-AS1
GH17G078410 2 FANTOM5 Ensembl ENCODE dbSUPER 0.2 -70.2 -70154 8.2 PKNOX1 ATF1 ARID4B SIN3A FEZF1 ZNF48 TCF12 ZNF121 GATA2 ZNF143 PGS1 SOCS3 DNAH17 TNRC6C-AS1 TK1 AFMID RNU6-638P LOC101928674 CYTH1 USP36
GH17G078474 0.9 ENCODE 0.4 -10.0 -10017 1.2 TBP PKNOX1 TBL1XR1 WRNIP1 GLIS2 CBX5 RELB IKZF2 CREM HCFC1 DNAH17-AS1 GC17M078388
GH17G078450 1.2 ENCODE dbSUPER 0.3 -33.8 -33806 1.2 HDGF PKNOX1 ZFP64 ARID4B SIN3A ZNF48 SLC30A9 FOS DEK MXD4 DNAH17 DNAH17-AS1 GC17M078388
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DNAH17-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DNAH17-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000098908 18 601 SREBF2 SIN3A ZNF143 ZNF207 ETV6 RELB CREM IKZF2 GATAD2B SP1

Genomic Location for DNAH17-AS1 Gene

Chromosome:
17
Start:
78,484,882 bp from pter
End:
78,503,056 bp from pter
Size:
18,175 bases
Orientation:
Plus strand

Genomic View for DNAH17-AS1 Gene

Genes around DNAH17-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNAH17-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNAH17-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAH17-AS1 Gene

Proteins for DNAH17-AS1 Gene

Post-translational modifications for DNAH17-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DNAH17-AS1 Gene

Domains & Families for DNAH17-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DNAH17-AS1 Gene

Function for DNAH17-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNAH17-AS1 Gene

Localization for DNAH17-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DNAH17-AS1 Gene

Pathways & Interactions for DNAH17-AS1 Gene

SuperPathways for DNAH17-AS1 Gene

No Data Available

Interacting Proteins for DNAH17-AS1 Gene

Gene Ontology (GO) - Biological Process for DNAH17-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DNAH17-AS1 Gene

Transcripts for DNAH17-AS1 Gene

mRNA/cDNA for DNAH17-AS1 Gene

(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DNAH17-AS1 Gene

No ASD Table

Relevant External Links for DNAH17-AS1 Gene

GeneLoc Exon Structure for
DNAH17-AS1
ECgene alternative splicing isoforms for
DNAH17-AS1

Expression for DNAH17-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DNAH17-AS1 Gene

genes like me logo Genes that share expression patterns with DNAH17-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNAH17-AS1 Gene

Orthologs for DNAH17-AS1 Gene

Evolution for DNAH17-AS1 Gene

ENSEMBL:
Gene Tree for DNAH17-AS1 (if available)
TreeFam:
Gene Tree for DNAH17-AS1 (if available)

No data available for Orthologs for DNAH17-AS1 Gene

Paralogs for DNAH17-AS1 Gene

No data available for Paralogs for DNAH17-AS1 Gene

Variants for DNAH17-AS1 Gene

Sequence variations from dbSNP and Humsavar for DNAH17-AS1 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000244538 -- 78,503,454(+) TGCTG(C/G)GATTA intron-variant, downstream-variant-500B
rs1000271327 -- 78,489,258(+) GAAAC(G/T)TAATT intron-variant
rs1000443705 -- 78,499,574(+) CACCT(A/G)GGATT intron-variant, nc-transcript-variant
rs1000632294 -- 78,491,932(+) GTCTG(C/T)GGAGC intron-variant
rs1000707175 -- 78,493,606(+) TCCAG(C/T)CTGTG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DNAH17-AS1 Gene

Variant ID Type Subtype PubMed ID
esv995150 CNV deletion 20482838
nsv470609 CNV loss 18288195
nsv524975 CNV loss 19592680
nsv576097 CNV loss 21841781

Variation tolerance for DNAH17-AS1 Gene

Gene Damage Index Score: 22.42; 99.43% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DNAH17-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNAH17-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DNAH17-AS1 Gene

Disorders for DNAH17-AS1 Gene

Relevant External Links for DNAH17-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DNAH17-AS1

No disorders were found for DNAH17-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DNAH17-AS1 Gene

Publications for DNAH17-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DNAH17-AS1 Gene

Sources for DNAH17-AS1 Gene

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