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Aliases for DNAH10 Gene

Aliases for DNAH10 Gene

  • Dynein Axonemal Heavy Chain 10 2 3 5
  • Dynein, Axonemal, Heavy Polypeptide 10 2
  • Axonemal Beta Dynein Heavy Chain 10 4
  • Ciliary Dynein Heavy Chain 10 4
  • KIAA2017 4

External Ids for DNAH10 Gene

Previous GeneCards Identifiers for DNAH10 Gene

  • GC13U990058
  • GC12P124029
  • GC12P122599
  • GC12P122658
  • GC12P122902
  • GC12P122792
  • GC12U900526
  • GC12P124247
  • GC12P121208

Summaries for DNAH10 Gene

Entrez Gene Summary for DNAH10 Gene

  • Dyneins are microtubule-associated motor protein complexes composed of several heavy, light, and intermediate chains. The axonemal dyneins, found in cilia and flagella, are components of the outer and inner dynein arms attached to the peripheral microtubule doublets. DNAH10 is an inner arm dynein heavy chain (Maiti et al., 2000 [PubMed 11175280]).[supplied by OMIM, Mar 2008]

GeneCards Summary for DNAH10 Gene

DNAH10 (Dynein Axonemal Heavy Chain 10) is a Protein Coding gene. Diseases associated with DNAH10 include Primary Ciliary Dyskinesia. Among its related pathways are Respiratory electron transport, ATP synthesis by chemiosmotic coupling, and heat production by uncoupling proteins.. GO annotations related to this gene include ATPase activity and microtubule motor activity. An important paralog of this gene is DNAH2.

UniProtKB/Swiss-Prot for DNAH10 Gene

  • Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.

Additional gene information for DNAH10 Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DNAH10 Gene

Genomics for DNAH10 Gene

Regulatory Elements for DNAH10 Gene

Enhancers for DNAH10 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12H123711 1.7 FANTOM5 ENCODE dbSUPER 17.3 -47.7 -47696 4.7 HDGF PKNOX1 ARNT ARID4B SIN3A DMAP1 ZBTB7B ZNF143 SP3 SP5 TCTN2 DDX55 DNAH10 EIF2B1 C12orf65 KMT5A ENSG00000270130 LOC101927415 ATP6V0A2 ENSG00000239215
GH12H123988 1.1 ENCODE dbSUPER 18.8 +230.2 230226 5 ATF1 FEZF1 GATA2 ZNF366 SCRT2 ATF7 CREM CEBPB NFIC IKZF1 DNAH10 DNAH10OS CCDC92 ZNF664 ENSG00000256827 ENSG00000274874
GH12H124005 1.1 Ensembl ENCODE dbSUPER 18.7 +245.6 245578 1.7 POLR2A TAL1 ZNF600 HNF4A ZIC2 TEAD3 DNAH10 DNAH10OS ZNF664 CCDC92 RFLNA PIR55353 ENSG00000275389
GH12H123948 0.8 ENCODE 18.8 +188.3 188292 2.2 ELF3 ESRRA SAP130 ZBTB21 YY1 POLR2A HNF4G NR2F6 ATF7 HOMEZ DNAH10 CCDC92 RFLNA PIR56131 PIR34615
GH12H123718 1.2 ENCODE dbSUPER 11.6 -41.2 -41218 2 PKNOX1 ATF1 ARNT TCF12 ZNF766 GATA2 ELK1 ATF7 NCOA1 SMARCB1 TCTN2 DNAH10 MPHOSPH9 CCDC92 ENSG00000239215 ATP6V0A2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DNAH10 on UCSC Golden Path with GeneCards custom track

Promoters for DNAH10 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000058778 1067 801 CTCF MXI1 SAP130 SIN3A ARID4B RAD21 POLR2A ZNF143 NR2F6 RUNX3

Genomic Locations for DNAH10 Gene

Genomic Locations for DNAH10 Gene
chr12:123,761,133-123,936,206
(GRCh38/hg38)
Size:
175,074 bases
Orientation:
Plus strand
chr12:124,247,042-124,420,753
(GRCh37/hg19)

Genomic View for DNAH10 Gene

Genes around DNAH10 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DNAH10 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DNAH10 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DNAH10 Gene

Proteins for DNAH10 Gene

  • Protein details for DNAH10 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8IVF4-DYH10_HUMAN
    Recommended name:
    Dynein heavy chain 10, axonemal
    Protein Accession:
    Q8IVF4
    Secondary Accessions:
    • C9JMF5
    • O95495
    • Q6ZUC9
    • Q6ZUP6
    • Q8N761

    Protein attributes for DNAH10 Gene

    Size:
    4471 amino acids
    Molecular mass:
    514841 Da
    Quaternary structure:
    • Consists of at least two heavy chains and a number of intermediate and light chains.
    SequenceCaution:
    • Sequence=BAC04579.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305}; Sequence=BAC86296.1; Type=Erroneous initiation; Note=Translation N-terminally extended.; Evidence={ECO:0000305};

    Alternative splice isoforms for DNAH10 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DNAH10 Gene

Post-translational modifications for DNAH10 Gene

  • Glycosylation at posLast=10741074
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for DNAH10 Gene

Domains & Families for DNAH10 Gene

Gene Families for DNAH10 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Suggested Antigen Peptide Sequences for DNAH10 Gene

Graphical View of Domain Structure for InterPro Entry

Q8IVF4

UniProtKB/Swiss-Prot:

DYH10_HUMAN :
  • Dynein heavy chains probably consist of an N-terminal stem (which binds cargo and interacts with other dynein components), and the head or motor domain. The motor contains six tandemly-linked AAA domains in the head, which form a ring. A stalk-like structure (formed by two of the coiled coil domains) protrudes between AAA 4 and AAA 5 and terminates in a microtubule-binding site. A seventh domain may also contribute to this ring; it is not clear whether the N-terminus or the C-terminus forms this extra domain. There are four well-conserved and two non-conserved ATPase sites, one per AAA domain. Probably only one of these (within AAA 1) actually hydrolyzes ATP, the others may serve a regulatory function (By similarity).
  • Belongs to the dynein heavy chain family.
Domain:
  • Dynein heavy chains probably consist of an N-terminal stem (which binds cargo and interacts with other dynein components), and the head or motor domain. The motor contains six tandemly-linked AAA domains in the head, which form a ring. A stalk-like structure (formed by two of the coiled coil domains) protrudes between AAA 4 and AAA 5 and terminates in a microtubule-binding site. A seventh domain may also contribute to this ring; it is not clear whether the N-terminus or the C-terminus forms this extra domain. There are four well-conserved and two non-conserved ATPase sites, one per AAA domain. Probably only one of these (within AAA 1) actually hydrolyzes ATP, the others may serve a regulatory function (By similarity).
Family:
  • Belongs to the dynein heavy chain family.
genes like me logo Genes that share domains with DNAH10: view

Function for DNAH10 Gene

Molecular function for DNAH10 Gene

UniProtKB/Swiss-Prot Function:
Force generating protein of respiratory cilia. Produces force towards the minus ends of microtubules. Dynein has ATPase activity; the force-producing power stroke is thought to occur on release of ADP. Involved in sperm motility; implicated in sperm flagellar assembly (By similarity). Probable inner arm dynein heavy chain.

Phenotypes From GWAS Catalog for DNAH10 Gene

Gene Ontology (GO) - Molecular Function for DNAH10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003774 motor activity IEA --
GO:0003777 microtubule motor activity IEA --
GO:0005524 ATP binding IEA --
GO:0008569 ATP-dependent microtubule motor activity, minus-end-directed IBA --
GO:0016887 ATPase activity IEA --
genes like me logo Genes that share ontologies with DNAH10: view
genes like me logo Genes that share phenotypes with DNAH10: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DNAH10 Gene

Localization for DNAH10 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DNAH10 Gene

Cytoplasm, cytoskeleton, cilium axoneme.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DNAH10 gene
Compartment Confidence
cytoskeleton 4
nucleus 2
cytosol 2

Gene Ontology (GO) - Cellular Components for DNAH10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IEA --
GO:0005856 cytoskeleton IEA --
GO:0005874 microtubule IEA --
GO:0005929 cilium IEA --
GO:0005930 axoneme IEA --
genes like me logo Genes that share ontologies with DNAH10: view

No data available for Subcellular locations from the Human Protein Atlas (HPA) for DNAH10 Gene

Pathways & Interactions for DNAH10 Gene

genes like me logo Genes that share pathways with DNAH10: view

Pathways by source for DNAH10 Gene

1 KEGG pathway for DNAH10 Gene

Interacting Proteins for DNAH10 Gene

Gene Ontology (GO) - Biological Process for DNAH10 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007018 microtubule-based movement IEA,IBA --
genes like me logo Genes that share ontologies with DNAH10: view

No data available for SIGNOR curated interactions for DNAH10 Gene

Drugs & Compounds for DNAH10 Gene

No Compound Related Data Available

Transcripts for DNAH10 Gene

mRNA/cDNA for DNAH10 Gene

(11) REFSEQ mRNAs :
(6) Additional mRNA sequences :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DNAH10 Gene

Dynein, axonemal, heavy chain 10:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DNAH10 Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15 ^ 16 ^ 17 ^ 18a · 18b ^ 19 ^ 20a · 20b ^ 21 ^ 22 ^
SP1: -
SP2: -
SP3:
SP4:
SP5:
SP6:

ExUns: 23a · 23b ^ 24 ^ 25 ^ 26a · 26b ^ 27 ^ 28
SP1:
SP2: -
SP3:
SP4:
SP5:
SP6:

Relevant External Links for DNAH10 Gene

GeneLoc Exon Structure for
DNAH10
ECgene alternative splicing isoforms for
DNAH10

Expression for DNAH10 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DNAH10 Gene

mRNA differential expression in normal tissues according to GTEx for DNAH10 Gene

This gene is overexpressed in Testis (x8.5) and Fallopian Tube (x4.3).

Protein differential expression in normal tissues from HIPED for DNAH10 Gene

This gene is overexpressed in Cervix (18.9), Amniocyte (13.9), Liver (10.3), Tlymphocyte (7.7), and Testis (6.2).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for DNAH10 Gene



NURSA nuclear receptor signaling pathways regulating expression of DNAH10 Gene:

DNAH10

SOURCE GeneReport for Unigene cluster for DNAH10 Gene:

Hs.622654

mRNA Expression by UniProt/SwissProt for DNAH10 Gene:

Q8IVF4-DYH10_HUMAN
Tissue specificity: Expressed primarily in trachea and testis, 2 tissues containing axonemal structures. Also expressed in brain but not in adult heart.

Evidence on tissue expression from TISSUES for DNAH10 Gene

  • Liver(4.3)
  • Nervous system(4.3)
  • Eye(4.2)
genes like me logo Genes that share expression patterns with DNAH10: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein tissue co-expression partners and Phenotype-based relationships between genes and organs from Gene ORGANizer for DNAH10 Gene

Orthologs for DNAH10 Gene

This gene was present in the common ancestor of animals.

Orthologs for DNAH10 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DNAH10 33 34
  • 98.72 (n)
dog
(Canis familiaris)
Mammalia DNAH10 33 34
  • 87.94 (n)
cow
(Bos Taurus)
Mammalia DNAH10 33 34
  • 87.49 (n)
oppossum
(Monodelphis domestica)
Mammalia DNAH10 34
  • 85 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Dnah10 33 16 34
  • 81.27 (n)
rat
(Rattus norvegicus)
Mammalia Dnah10 33
  • 81.26 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia DNAH10 34
  • 76 (a)
OneToOne
chicken
(Gallus gallus)
Aves DNAH10 33
  • 71.2 (n)
-- 34
  • 33 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia DNAH10 34
  • 76 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia dnah10 33
  • 71.37 (n)
African clawed frog
(Xenopus laevis)
Amphibia Xl.7994 33
zebrafish
(Danio rerio)
Actinopterygii si:dkeyp-86b9.1 33
  • 67.65 (n)
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP001660 33
  • 57.42 (n)
fruit fly
(Drosophila melanogaster)
Insecta Dhc98D 33 34
  • 56.09 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 68 (a)
OneToOne
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.7110 33
Species where no ortholog for DNAH10 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for DNAH10 Gene

ENSEMBL:
Gene Tree for DNAH10 (if available)
TreeFam:
Gene Tree for DNAH10 (if available)

Paralogs for DNAH10 Gene

Paralogs for DNAH10 Gene

(16) SIMAP similar genes for DNAH10 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with DNAH10: view

Variants for DNAH10 Gene

Sequence variations from dbSNP and Humsavar for DNAH10 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs111540619 Likely benign 123,761,259(+) CCTTA(C/G)GATGT upstream-variant-2KB, utr-variant-3-prime
rs183891010 Likely benign 123,761,032(+) CTCCC(A/G)AGTAG upstream-variant-2KB, utr-variant-3-prime
rs7310965 Likely benign 123,761,267(+) TGTCC(A/G)TGAAT upstream-variant-2KB, utr-variant-3-prime
rs73420352 Likely benign 123,761,635(+) GAGGG(A/G)AAATG upstream-variant-2KB, utr-variant-3-prime
rs77292614 Likely benign 123,760,678(+) TCTTC(A/G)GTAAA upstream-variant-2KB, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for DNAH10 Gene

Variant ID Type Subtype PubMed ID
nsv915 CNV insertion 18451855
nsv560514 CNV gain+loss 21841781
nsv560513 CNV gain 21841781
nsv560508 CNV gain+loss 21841781
nsv560507 CNV gain 21841781
nsv560504 CNV gain+loss 21841781
nsv560503 CNV loss 21841781
nsv560502 CNV loss 21841781
nsv560499 CNV gain 21841781
nsv522321 CNV loss 19592680
nsv509484 CNV insertion 20534489
nsv480736 CNV novel sequence insertion 20440878
nsv1153044 CNV insertion 26484159
nsv1141759 CNV insertion 24896259
nsv1071065 CNV deletion 25765185
esv998816 CNV insertion 20482838
esv3630996 CNV loss 21293372
esv29401 CNV gain+loss 19812545
esv2746514 CNV deletion 23290073
esv2746513 CNV deletion 23290073
esv1783084 CNV insertion 17803354
dgv887n106 CNV deletion 24896259
dgv2933n54 CNV gain+loss 21841781
dgv2932n54 CNV loss 21841781
dgv2931n54 CNV loss 21841781
dgv2930n54 CNV loss 21841781
dgv2929n54 CNV gain 21841781
dgv2928n54 CNV gain+loss 21841781
dgv2927n54 CNV gain 21841781

Variation tolerance for DNAH10 Gene

Residual Variation Intolerance Score: 97.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 14.22; 96.22% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DNAH10 Gene

Human Gene Mutation Database (HGMD)
DNAH10
SNPedia medical, phenotypic, and genealogical associations of SNPs for
DNAH10

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DNAH10 Gene

Disorders for DNAH10 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DNAH10 Gene - From: GeneCards

Disorder Aliases PubMed IDs
primary ciliary dyskinesia
  • kartagener syndrome
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for DNAH10

Genetic Association Database (GAD)
DNAH10
Human Genome Epidemiology (HuGE) Navigator
DNAH10
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DNAH10
genes like me logo Genes that share disorders with DNAH10: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DNAH10 Gene

Publications for DNAH10 Gene

  1. Forty-three loci associated with plasma lipoprotein size, concentration, and cholesterol content in genome-wide analysis. (PMID: 19936222) Chasman DI … Ridker PM (PLoS genetics 2009) 3 45 60
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 60
  3. Identification, tissue specific expression, and chromosomal localisation of several human dynein heavy chain genes. (PMID: 11175280) Maiti AK … Bouvagnet P (European journal of human genetics : EJHG 2000) 3 4 60
  4. Variants in the genes DCTN2, DNAH10, LRIG3, and MYO1A are associated with intermediate Charcot-Marie-Tooth disease in a Norwegian family. (PMID: 26517670) Braathen GJ … Russell MB (Acta neurologica Scandinavica 2016) 3 60
  5. Kelch Domain of Gigaxonin Interacts with Intermediate Filament Proteins Affected in Giant Axonal Neuropathy. (PMID: 26460568) Johnson-Kerner BL … Wichterle H (PloS one 2015) 3 60

Products for DNAH10 Gene

Sources for DNAH10 Gene

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