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Aliases for DLX6-AS1 Gene

Subcategory (RNA class) for DLX6-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for DLX6-AS1 Gene

  • DLX6 Antisense RNA 1 2 3
  • DLX6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • DLX6 Antisense RNA (Non-Protein Coding) 3
  • Non-Protein Coding RNA 212 2
  • NCRNA00212 3
  • DLX6-AS 3
  • DLX6AS 3
  • Evf-2 3

External Ids for DLX6-AS1 Gene

ORGUL Members for DLX6-AS1 Gene

Previous Symbols for DLX6-AS1 Gene

  • NCRNA00212

Summaries for DLX6-AS1 Gene

GeneCards Summary for DLX6-AS1 Gene

DLX6-AS1 (DLX6 Antisense RNA 1) is a RNA Gene, and belongs to antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DLX6-AS1 Gene

Genomics for DLX6-AS1 Gene

Genomic Location for DLX6-AS1 Gene

Start:
96,955,141 bp from pter
End:
97,014,065 bp from pter
Size:
58,925 bases
Orientation:
Minus strand

Genomic View for DLX6-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DLX6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DLX6-AS1 Gene

No data available for Regulatory Elements for DLX6-AS1 Gene

Proteins for DLX6-AS1 Gene

Post-translational modifications for DLX6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLX6-AS1 Gene

Domains for DLX6-AS1 Gene

Gene Families for DLX6-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with DLX6-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for DLX6-AS1 Gene

Function for DLX6-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DLX6-AS1 Gene

Localization for DLX6-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for DLX6-AS1 Gene

Pathways for DLX6-AS1 Gene

SuperPathways for DLX6-AS1 Gene

No Data Available

Interacting Proteins for DLX6-AS1 Gene

Gene Ontology (GO) - Biological Process for DLX6-AS1 Gene

None

No data available for Pathways by source for DLX6-AS1 Gene

Transcripts for DLX6-AS1 Gene

Unigene Clusters for DLX6-AS1 Gene

DLX6 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DLX6-AS1 Gene

No ASD Table

Relevant External Links for DLX6-AS1 Gene

GeneLoc Exon Structure for
DLX6-AS1
ECgene alternative splicing isoforms for
DLX6-AS1

Expression for DLX6-AS1 Gene

mRNA expression in normal human tissues for DLX6-AS1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for DLX6-AS1 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (7.1), Brain - Caudate (basal ganglia) (6.4), Brain - Putamen (basal ganglia) (5.9), Brain - Nucleus accumbens (basal ganglia) (5.8), and Brain - Amygdala (4.8).

SOURCE GeneReport for Unigene cluster for DLX6-AS1 Gene Hs.34969

genes like me logo Genes that share expressions with DLX6-AS1: view

Orthologs for DLX6-AS1 Gene

Evolution for DLX6-AS1 Gene

ENSEMBL:
Gene Tree for DLX6-AS1 (if available)
TreeFam:
Gene Tree for DLX6-AS1 (if available)

No data available for Orthologs for DLX6-AS1 Gene

Paralogs for DLX6-AS1 Gene

No data available for Paralogs for DLX6-AS1 Gene

Variants for DLX6-AS1 Gene

Sequence variations from dbSNP and Humsavar for DLX6-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs717483 -- 96,986,507(+) CTCTC(C/T)TCTTA intron-variant
rs731262 -- 96,970,705(+) GGGTC(C/T)GGGTT intron-variant
rs731263 -- 96,970,321(+) GACAA(A/T)TCCGT intron-variant
rs757536 -- 96,981,535(+) ATAAG(A/C)GATTC intron-variant
rs886583 -- 96,995,967(+) TTTAA(G/T)GACAC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DLX6-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv824221 CNV Gain 20364138
esv1318286 CNV Deletion 17803354

Relevant External Links for DLX6-AS1 Gene

HapMap Linkage Disequilibrium report
DLX6-AS1

Disorders for DLX6-AS1 Gene

No disorders were found for DLX6-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for DLX6-AS1 Gene

Publications for DLX6-AS1 Gene

  1. The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator. (PMID: 16705037) Feng J. … Kohtz J.D. (Genes Dev. 2006) 2 3
  2. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for DLX6-AS1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate DLX6-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DLX6-AS1
    • Block miRNA regulation of DLX6-AS1 using miScript Target Protectors

    Sources for DLX6-AS1 Gene

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