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Aliases for DLX6-AS1 Gene

Subcategory (RNA class) for DLX6-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DLX6-AS1 Gene

  • DLX6 Antisense RNA 1 2 3 5
  • DLX6 Antisense RNA 1 (Non-Protein Coding) 2 3
  • DLX6 Antisense RNA (Non-Protein Coding) 3
  • Non-Protein Coding RNA 212 2
  • NCRNA00212 3
  • DLX6-AS 3
  • DLX6AS 3
  • Evf-2 3

External Ids for DLX6-AS1 Gene

Previous HGNC Symbols for DLX6-AS1 Gene

  • NCRNA00212

Previous GeneCards Identifiers for DLX6-AS1 Gene

  • GC07M096595

Summaries for DLX6-AS1 Gene

GeneCards Summary for DLX6-AS1 Gene

DLX6-AS1 (DLX6 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with DLX6-AS1 include Coffin-Siris Syndrome.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DLX6-AS1 Gene

Genomics for DLX6-AS1 Gene

Regulatory Elements for DLX6-AS1 Gene

Enhancers for DLX6-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07G097012 0.6 FANTOM5 0.7 +1.1 1136 0.2 RNF2 POLR2A CBX2 ZSCAN29 EP300 EZH2 DLX5 DLX6 DLX6-AS1 GC07M097006
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DLX6-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DLX6-AS1 Gene

Chromosome:
7
Start:
96,955,141 bp from pter
End:
97,014,065 bp from pter
Size:
58,925 bases
Orientation:
Minus strand

Genomic View for DLX6-AS1 Gene

Genes around DLX6-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DLX6-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLX6-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DLX6-AS1 Gene

Proteins for DLX6-AS1 Gene

Post-translational modifications for DLX6-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLX6-AS1 Gene

Domains & Families for DLX6-AS1 Gene

Gene Families for DLX6-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DLX6-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DLX6-AS1 Gene

Function for DLX6-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLX6-AS1 Gene

Localization for DLX6-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DLX6-AS1 Gene

Pathways & Interactions for DLX6-AS1 Gene

SuperPathways for DLX6-AS1 Gene

No Data Available

Interacting Proteins for DLX6-AS1 Gene

Gene Ontology (GO) - Biological Process for DLX6-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DLX6-AS1 Gene

Drugs & Compounds for DLX6-AS1 Gene

No Compound Related Data Available

Transcripts for DLX6-AS1 Gene

Unigene Clusters for DLX6-AS1 Gene

DLX6 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DLX6-AS1 Gene

No ASD Table

Relevant External Links for DLX6-AS1 Gene

GeneLoc Exon Structure for
DLX6-AS1
ECgene alternative splicing isoforms for
DLX6-AS1

Expression for DLX6-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DLX6-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DLX6-AS1 Gene

This gene is overexpressed in Brain - Anterior cingulate cortex (BA24) (x7.1), Brain - Caudate (basal ganglia) (x6.4), Brain - Putamen (basal ganglia) (x5.9), Brain - Nucleus accumbens (basal ganglia) (x5.8), and Brain - Amygdala (x4.8).

SOURCE GeneReport for Unigene cluster for DLX6-AS1 Gene:

Hs.34969
genes like me logo Genes that share expression patterns with DLX6-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLX6-AS1 Gene

Orthologs for DLX6-AS1 Gene

Evolution for DLX6-AS1 Gene

ENSEMBL:
Gene Tree for DLX6-AS1 (if available)
TreeFam:
Gene Tree for DLX6-AS1 (if available)

No data available for Orthologs for DLX6-AS1 Gene

Paralogs for DLX6-AS1 Gene

No data available for Paralogs for DLX6-AS1 Gene

Variants for DLX6-AS1 Gene

Sequence variations from dbSNP and Humsavar for DLX6-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000020107 -- 97,013,122(+) ATAGA(A/G)CAGCA intron-variant
rs1000039266 -- 97,002,186(+) CCGGG(G/T)CCTTG intron-variant
rs1000119036 -- 96,981,438(+) ACATA(G/T)TTATA intron-variant
rs1000323074 -- 96,993,327(+) TGCCC(A/G)AGCCG intron-variant
rs1000436552 -- 97,001,837(+) CAGTG(A/G)CCTCC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DLX6-AS1 Gene

Variant ID Type Subtype PubMed ID
esv1318286 CNV deletion 17803354
nsv1149699 CNV deletion 26484159
nsv824221 CNV gain 20364138
nsv981549 CNV duplication 23825009

Relevant External Links for DLX6-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLX6-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DLX6-AS1 Gene

Disorders for DLX6-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for DLX6-AS1 Gene - From: DISEASES

Disorder Aliases PubMed IDs
coffin-siris syndrome
  • dwarfism-onychodysplasia
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for DLX6-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DLX6-AS1
genes like me logo Genes that share disorders with DLX6-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for DLX6-AS1 Gene

Publications for DLX6-AS1 Gene

  1. The Evf-2 noncoding RNA is transcribed from the Dlx-5/6 ultraconserved region and functions as a Dlx-2 transcriptional coactivator. (PMID: 16705037) Feng J. … Kohtz J.D. (Genes Dev. 2006) 2 3 64
  2. Expression of long non-coding RNA DLX6-AS1 in lung adenocarcinoma. (PMID: 26052251) Li J. … Zhang G. (Cancer Cell Int. 2015) 3 64
  3. A genome-wide association study identifies susceptibility loci for ossification of the posterior longitudinal ligament of the spine. (PMID: 25064007) Nakajima M. … Ikegawa S. (Nat. Genet. 2014) 3 64
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3 64
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64

Products for DLX6-AS1 Gene

Sources for DLX6-AS1 Gene

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