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Aliases & Descriptions for DLST
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| DLTS 2, 3 | | E2 3 | | E2K 3 | | EC 2.3.1.61 3 |
| | | Descriptions |
|---|
Dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase complex 3 | dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) 2 |
|
| | Search outside databases for aliases for DLST genePrevious GC identifers: GC14P072875 GC14P069166 GC14P073338 |
Summaries for DLST(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| UniProtKB/Swiss-Prot: ODO2_HUMAN, P36957Function: The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)Gene Wiki entry for DLST |
Genomic Location for DLST
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the DLST gene 
Entrez Gene cytogenetic band: 14q24.3 Ensembl cytogenetic band: 14q24.3 HGNC cytogenetic band: 14q23.1DLST Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 14 GeneLoc Exon Structure GeneLoc location for GC14P074418:
(about GC identifiers)
Start:
|
74,418,372 bp from pter |
End:
|
74,440,199 bp from pter |
Size:
|
21,828 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000014.7 NT_026437.11
| Proteins for DLST
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ODO2_HUMAN, P36957 (See
protein sequence)Recommended Name: Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial precursor Size: 453 amino acids; 48729 Da
Cofactor: Binds 1 lipoyl cofactor covalently
Subunit: Forms a 24-polypeptide structural core with octahedral symmetry
Subcellular location: Mitochondrion
Secondary accessions: Q7LDY7 Q9BQ32REFSEQ proteins: NP_001924.2
ENSEMBL proteins: ENSP00000238671 ENSP00000335465 ENSP00000335304
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for DLST: Assays for DLST: | Protein
Domains/ Families for DLST(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P36957
ProtoNet protein and cluster: P36957 3 Blocks protein families: IPB000089 Biotin/lipoyl attachment IPB001078 Catalytic domain of components of various dehydrogenase complexes IPB003016 2-oxo acid dehydrogenase
UniProtKB/Swiss-Prot: ODO2_HUMAN, P36957Similarity: Belongs to the 2-oxoacid dehydrogenase familySimilarity: Contains 1 lipoyl-binding domain | Gene Function for DLST
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001933
Applied Biosystems Silencer® siRNAs for DLST
Sigma-Aldrich siRNA for DLST  Sigma-Aldrich shRNA for DLST  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001933                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001933                                  untagged cDNA clone in CMV expression vector: NM_001933 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001933
UniProtKB/Swiss-Prot: ODO2_HUMAN, P36957Function: The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2). It contains multiple copies of 3 enzymatic components: 2-oxoglutarate dehydrogenase (E1), dihydrolipoamide succinyltransferase (E2) and lipoamide dehydrogenase (E3)Catalytic activity: Succinyl-CoA + enzyme N(6)-(dihydrolipoyl)lysine = CoA + enzyme N(6)-(S-succinyldihydrolipoyl)lysineEnzyme Number (IUBMB): EC 2.3.1.61 Genatlas biochemistry entry for DLST:dihydrolipoamide S-succinyltransferase1 MGI phenotypic allele for Dlst (no phenotypes)
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for DLST
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 2 Sigma-Aldrich "Your Favorite Gene" Pathways for DLST (Your Favorite Gene powered by Ingenuity) 
UniProtKB/Swiss-Prot: ODO2_HUMAN, P36957Pathway: Amino-acid degradation; L-lysine degradation via saccharopine pathway; glutaryl-CoA from L-lysine: step 6/6 5/68 Interacting proteins for DLST (ENSP000003353043 P369571, 2) via UniProtKB, MINT, and/or STRING (see all 68
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for DLST(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for DLST 2 Novoseek chemical compound relationships for DLST gene
About this table
|
Transcripts for DLST(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_001933
Sigma-Aldrich siRNA for DLST  Sigma-Aldrich shRNA for DLST  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001933 REFSEQ mRNAs for DLST gene: NM_001933.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001933               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001933                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001933                                  untagged cDNA clone in CMV expression vector: NM_001933  Additional cDNA sequence: AK289414.1 AK299505.1 AK300396.1 AK316463.1 BC000302.2 BC001922.1 BC002735.2 BX248276.1 BX248764.1 BX248774.1 CR456727.1 CR600036.1 D16373.1 D17297.1 L37418.1 18 DOTS entries: DT.453765 DT.92439236 DT.75109878 DT.92439234 DT.100813975 DT.100813973 DT.91718816 DT.92014352 DT.99958124 DT.100761902 DT.100813977 DT.120771811 DT.75200367 DT.91924663 DT.92439235 DT.97790453 DT.97845678 DT.100813969 24/238 AceView cDNA sequences (see all 238
):AU133381 AI738526 AU133426 BM929953 AI768855 CK725012 AU131128 BX248764 AI805200 BF219729 CD724051 BM468606 BP341159 AI685838 BE671035 BU623022 BX248774 AI335698 AA291301 AW150246 BF056135 BX395796 BG057758 AL554351
highest scoring ESTs for DLST:AW004933 AA088713 AA101666 AA101667 AA236650 AA262060 AA343667 AA443359 AA454025 AA683363 Unigene Cluster for DLST: Dihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex) Hs.525459 [show with all ESTs]Unigene Representative Sequence: NM_001933
GeneLoc Exon Structure
3 Ensembl transcripts including schematic representations: ENST00000238671
ENST00000334212
ENST00000334220
|
Expression for DLST
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| DLST expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for DLST
1 / 2 / 3 4 probe-sets matching DLST gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GCTTTGTATC
SOURCE GeneReport for Unigene cluster: Hs.525459
Expression variation in blood from EXPOLDB for DLST |
Orthologs for DLST
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for DLST gene from 5/28 species (see all 28
)
About this table Species with no ortholog for DLST
ENSEMBL Gene Tree for DLST | Paralogs for DLST(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for DLST(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for DLST (up to first 250kb)
|
Disorders & Mutations for DLST
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 126063
2 Novoseek disease relationships for DLST gene
About this table
Genetic Association Database: DLST Human Genome Epidemiology Navigator: DLST (4 documents)
|
Medical News for DLST(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for DLST (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/40 PubMed articles for DLST gene (see all 40
):- Isolation, characterization, and mapping of gene encoding dihydrolipoyl succinyltransferase (E2k) of human alpha-ketoglutarate dehydrogenase complex. (PubMed id 8009371)1, 2, 3 Ali G.... Blass J.P. (1994)
- No association between DLST gene and Alzheimer's disease or Wernicke-Korsakoff syndrome. (PubMed id 11445257)1, 3, 6 Matsushita S....Higuchi S. (2001)
- [Association between DLST gene polymorphism and Alzheimer's disease] (PubMed id 11825528)1, 3, 6 Ma Q....Yang J. (2001)
- Lack of replication of association findings in complex disease: an analysis of 15 polymorphisms in prior candidate genes for sporadic Alzheimer's disease. (PubMed id 11436125)1, 3, 6 Prince J.A....Brookes A.J. (2001)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Isolation, characterization and structural organization of the gene and pseudogene for the dihydrolipoamide succinyltransferase component of the human 2-oxoglutarate dehydrogenase complex. (PubMed id 8076640)3, 4 Nakano K....Matuda S. (1994)
- Human dihydrolipoamide succinyltransferase: cDNA cloning and localization on chromosome 14q24.2-q24.3. (PubMed id 8268217)3, 4 Nakano K.... Miyata T. (1993)
- Modulation by DLST of the genetic risk of Alzheimer's disease in a very elderly population. (PubMed id 9894876)1, 3 Sheu K.F....Blass J.P. (1999)
- Mutation analysis of the chromosome 14q24.3 dihydrolipoyl succinyltransferase (DLST) gene in patients with early-onset Alzheimer disease. (PubMed id 8584231)1, 3 Cruts M....Adolfsson R. (1995)
- Substantial linkage disequilibrium across the dihydrolipoyl succinyltransferase gene region without Alzheimer's disease association. (PubMed id 15038610)1, 3 Brown A.M....Blass J.P. (2004)
|
Search for DLST
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing DLST
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing DLST
(According to HUGE)
About This Section
| -- |
Specialized Databases showing DLST(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for DLST(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for DLST:

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Incremental update: 13 Oct 2009
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