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Aliases for DLG3-AS1 Gene

Subcategory (RNA class) for DLG3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DLG3-AS1 Gene

  • DLG3 Antisense RNA 1 2 3 5
  • DLG3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DLG3-AS1 Gene

Previous GeneCards Identifiers for DLG3-AS1 Gene

  • GC00U933170
  • GC0XM069673

Summaries for DLG3-AS1 Gene

GeneCards Summary for DLG3-AS1 Gene

DLG3-AS1 (DLG3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DLG3-AS1 Gene

Genomics for DLG3-AS1 Gene

Regulatory Elements for DLG3-AS1 Gene

Enhancers for DLG3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG070475 1.1 Ensembl ENCODE 13.5 -23.3 -23302 6.8 ZFP64 INSM2 KLF17 GLIS2 ZNF366 ZSCAN5C SCRT2 FOS EGR2 SP3 DLG3 DLG3-AS1 RNU4-81P GDPD2 ENSG00000230187
GH0XG070525 0.8 ENCODE 12.7 -69.8 -69755 0.9 SOX13 ESRRA FOXA2 RAD21 THRB RARA CTBP1 GATA3 FOSL2 FOS DLG3-AS1 RNU4-81P DLG3 ENSG00000230187
GH0XG070454 1 ENCODE 0.7 +0.6 583 2.7 PKNOX1 GLI4 ZNF2 GLIS2 ZNF143 KLF7 ZNF263 SP3 NFYC JUNB RNU4-81P DLG3-AS1
GH0XG070451 0.8 ENCODE 0.7 +3.2 3236 2.1 CTCF RAD21 E2F1 POLR2A EED PATZ1 SMC3 IKZF2 ZBTB20 EGR2 DLG3 RNU4-81P DLG3-AS1
GH0XG070457 0.2 Ensembl 0.7 -1.1 -1107 0.2 DLG3-AS1 ENSG00000230187
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DLG3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DLG3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000247079 394 2001 PKNOX1 ZNF2 GLIS2 ZNF143 KLF7 ZNF263 SP3 NFYC JUNB REST

Genomic Location for DLG3-AS1 Gene

Chromosome:
X
Start:
70,452,956 bp from pter
End:
70,455,994 bp from pter
Size:
3,039 bases
Orientation:
Minus strand

Genomic View for DLG3-AS1 Gene

Genes around DLG3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DLG3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLG3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DLG3-AS1 Gene

Proteins for DLG3-AS1 Gene

Post-translational modifications for DLG3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLG3-AS1 Gene

Domains & Families for DLG3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DLG3-AS1 Gene

Function for DLG3-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLG3-AS1 Gene

Localization for DLG3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DLG3-AS1 Gene

Pathways & Interactions for DLG3-AS1 Gene

SuperPathways for DLG3-AS1 Gene

No Data Available

Interacting Proteins for DLG3-AS1 Gene

Gene Ontology (GO) - Biological Process for DLG3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DLG3-AS1 Gene

Drugs & Compounds for DLG3-AS1 Gene

No Compound Related Data Available

Transcripts for DLG3-AS1 Gene

mRNA/cDNA for DLG3-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DLG3-AS1 Gene

No ASD Table

Relevant External Links for DLG3-AS1 Gene

GeneLoc Exon Structure for
DLG3-AS1
ECgene alternative splicing isoforms for
DLG3-AS1

Expression for DLG3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DLG3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DLG3-AS1 Gene

This gene is overexpressed in Pancreas (x7.0) and Minor Salivary Gland (x5.0).
genes like me logo Genes that share expression patterns with DLG3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLG3-AS1 Gene

Orthologs for DLG3-AS1 Gene

Evolution for DLG3-AS1 Gene

ENSEMBL:
Gene Tree for DLG3-AS1 (if available)
TreeFam:
Gene Tree for DLG3-AS1 (if available)

No data available for Orthologs for DLG3-AS1 Gene

Paralogs for DLG3-AS1 Gene

No data available for Paralogs for DLG3-AS1 Gene

Variants for DLG3-AS1 Gene

Sequence variations from dbSNP and Humsavar for DLG3-AS1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs398122847 Pathogenic 70,454,284(+) CCAGT(C/G)AGTCA intron-variant, upstream-variant-2KB, reference, stop-gained, utr-variant-5-prime
rs371545673 Uncertain significance 70,454,299(+) TGTGG(C/T)CCAGT intron-variant, upstream-variant-2KB, reference, missense, utr-variant-5-prime
rs797045524 Uncertain significance 70,453,733(+) TTCAT(C/T)CTGGC intron-variant, upstream-variant-2KB, reference, synonymous-codon, utr-variant-5-prime
rs797045525 Uncertain significance 70,454,321(+) GGTAG(-/GAG)AAGGG intron-variant, upstream-variant-2KB
rs12850410 Benign 70,452,612(+) AGAGA(C/G)AGAGG intron-variant, downstream-variant-500B, utr-variant-5-prime

Structural Variations from Database of Genomic Variants (DGV) for DLG3-AS1 Gene

Variant ID Type Subtype PubMed ID
esv1584074 OTHER inversion 17803354
esv33082 CNV loss 17666407

Relevant External Links for DLG3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLG3-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DLG3-AS1 Gene

Disorders for DLG3-AS1 Gene

Relevant External Links for DLG3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DLG3-AS1

No disorders were found for DLG3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DLG3-AS1 Gene

Publications for DLG3-AS1 Gene

No publications were found for DLG3-AS1 Gene.

Products for DLG3-AS1 Gene

Sources for DLG3-AS1 Gene

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