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Aliases for DLG1-AS1 Gene

Subcategory (RNA class) for DLG1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DLG1-AS1 Gene

  • DLG1 Antisense RNA 1 2 3 5
  • DLG1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DLG1-AS1 Gene

Previous GeneCards Identifiers for DLG1-AS1 Gene

  • GC03P197027

Summaries for DLG1-AS1 Gene

GeneCards Summary for DLG1-AS1 Gene

DLG1-AS1 (DLG1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for DLG1-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DLG1-AS1 Gene

Genomics for DLG1-AS1 Gene

GeneHancer (GH) Regulatory Elements for DLG1-AS1 Gene

Promoters and enhancers for DLG1-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I197295 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 550.8 -0.1 -116 5.2 HDGF PKNOX1 ZFP64 ARID4B SIN3A ZBTB7B YY1 POLR2B ZNF766 ZNF143 DLG1 GC03P197299 DLG1-AS1 MELTF CEP19 MIR4797
GH03I197302 Enhancer 0.9 Ensembl ENCODE dbSUPER 0.8 +4.7 4718 1.4 MITF DACH1 HMBOX1 USF2 ZSCAN29 DLG1-AS1 GC03P197299 GC03M197310
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DLG1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DLG1-AS1 Gene

Genomic Locations for DLG1-AS1 Gene
chr3:197,298,247-197,303,751
(GRCh38/hg38)
Size:
5,505 bases
Orientation:
Plus strand
chr3:197,025,118-197,030,622
(GRCh37/hg19)

Genomic View for DLG1-AS1 Gene

Genes around DLG1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DLG1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLG1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DLG1-AS1 Gene

Proteins for DLG1-AS1 Gene

Post-translational modifications for DLG1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLG1-AS1 Gene

Domains & Families for DLG1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DLG1-AS1 Gene

Function for DLG1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLG1-AS1 Gene

Localization for DLG1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DLG1-AS1 Gene

Pathways & Interactions for DLG1-AS1 Gene

SuperPathways for DLG1-AS1 Gene

No Data Available

Interacting Proteins for DLG1-AS1 Gene

Gene Ontology (GO) - Biological Process for DLG1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DLG1-AS1 Gene

Drugs & Compounds for DLG1-AS1 Gene

No Compound Related Data Available

Transcripts for DLG1-AS1 Gene

mRNA/cDNA for DLG1-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DLG1-AS1 Gene

DLG1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DLG1-AS1 Gene

No ASD Table

Relevant External Links for DLG1-AS1 Gene

GeneLoc Exon Structure for
DLG1-AS1
ECgene alternative splicing isoforms for
DLG1-AS1

Expression for DLG1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DLG1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DLG1-AS1 Gene

This gene is overexpressed in Testis (x20.5) and Esophagus - Mucosa (x4.4).

SOURCE GeneReport for Unigene cluster for DLG1-AS1 Gene:

Hs.636103
genes like me logo Genes that share expression patterns with DLG1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DLG1-AS1 Gene

Orthologs for DLG1-AS1 Gene

Evolution for DLG1-AS1 Gene

ENSEMBL:
Gene Tree for DLG1-AS1 (if available)
TreeFam:
Gene Tree for DLG1-AS1 (if available)

No data available for Orthologs for DLG1-AS1 Gene

Paralogs for DLG1-AS1 Gene

No data available for Paralogs for DLG1-AS1 Gene

Variants for DLG1-AS1 Gene

Sequence variations from dbSNP and Humsavar for DLG1-AS1 Gene

SNP ID Clin Chr 03 pos Variation AA Info Type
rs1000196928 -- 197,301,608(+) C/T intron_variant
rs1000230148 -- 197,296,597(+) T/C upstream_transcript_variant
rs1000334018 -- 197,301,314(+) A/C intron_variant
rs1000840774 -- 197,302,976(+) G/A non_coding_transcript_variant
rs1001294340 -- 197,303,279(+) C/T non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DLG1-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv5038n100 CNV gain 25217958
dgv635n27 CNV gain 19166990
esv2759214 CNV gain+loss 17122850
esv3599293 CNV gain 21293372
esv3599304 CNV gain 21293372
esv3893852 CNV gain 25118596
nsv428431 CNV gain+loss 18775914
nsv471149 CNV gain 18288195
nsv516873 CNV gain+loss 19592680
nsv593116 CNV gain 21841781
nsv818205 CNV gain 17921354
nsv829830 CNV gain 17160897

Additional Variant Information for DLG1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLG1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DLG1-AS1 Gene

Disorders for DLG1-AS1 Gene

Additional Disease Information for DLG1-AS1

No disorders were found for DLG1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DLG1-AS1 Gene

Publications for DLG1-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DLG1-AS1 Gene

Sources for DLG1-AS1 Gene

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