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Aliases for DLG1-AS1 Gene

Subcategory (RNA class) for DLG1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DLG1-AS1 Gene

  • DLG1 Antisense RNA 1 2 3 5
  • DLG1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DLG1-AS1 Gene

Previous GeneCards Identifiers for DLG1-AS1 Gene

  • GC03P197027

Summaries for DLG1-AS1 Gene

GeneCards Summary for DLG1-AS1 Gene

DLG1-AS1 (DLG1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DLG1-AS1 Gene

Genomics for DLG1-AS1 Gene

Regulatory Elements for DLG1-AS1 Gene

Enhancers for DLG1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03F197296 1.1 ENCODE 0.8 -0.1 -117 5.2 HDGF PKNOX1 ZFP64 ARID4B SIN3A YY1 FOS SP3 SP5 NFYC LRCH3 DLG1 UBXN7 ENSG00000234742 MELTF CEP19 DLG1-AS1 MIR4797
GH03F197295 0.6 Ensembl 0.8 -2.9 -2947 0.2 ZNF121 ZNF664 CEBPA CEBPB REST CEBPG DLG1 DLG1-AS1 MIR4797
GH03F197294 0.5 Ensembl 0.8 -3.6 -3647 0.4 POLR2A CEBPB ZBTB33 DLG1 DLG1-AS1 MIR4797
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DLG1-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DLG1-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001384048 -447 4001 HDGF PKNOX1 ZFP64 ARID4B SIN3A YY1 FOS SP3 SP5 NFYC

Genomic Location for DLG1-AS1 Gene

Chromosome:
3
Start:
197,298,247 bp from pter
End:
197,303,751 bp from pter
Size:
5,505 bases
Orientation:
Plus strand

Genomic View for DLG1-AS1 Gene

Genes around DLG1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DLG1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DLG1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DLG1-AS1 Gene

Proteins for DLG1-AS1 Gene

Post-translational modifications for DLG1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DLG1-AS1 Gene

Domains & Families for DLG1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DLG1-AS1 Gene

Function for DLG1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DLG1-AS1 Gene

Localization for DLG1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DLG1-AS1 Gene

Pathways & Interactions for DLG1-AS1 Gene

SuperPathways for DLG1-AS1 Gene

No Data Available

Interacting Proteins for DLG1-AS1 Gene

Gene Ontology (GO) - Biological Process for DLG1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DLG1-AS1 Gene

Transcripts for DLG1-AS1 Gene

mRNA/cDNA for DLG1-AS1 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DLG1-AS1 Gene

DLG1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DLG1-AS1 Gene

No ASD Table

Relevant External Links for DLG1-AS1 Gene

GeneLoc Exon Structure for
DLG1-AS1
ECgene alternative splicing isoforms for
DLG1-AS1

Expression for DLG1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DLG1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DLG1-AS1 Gene

This gene is overexpressed in Testis (x20.5) and Esophagus - Mucosa (x4.4).

SOURCE GeneReport for Unigene cluster for DLG1-AS1 Gene:

Hs.636103
genes like me logo Genes that share expression patterns with DLG1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DLG1-AS1 Gene

Orthologs for DLG1-AS1 Gene

Evolution for DLG1-AS1 Gene

ENSEMBL:
Gene Tree for DLG1-AS1 (if available)
TreeFam:
Gene Tree for DLG1-AS1 (if available)

No data available for Orthologs for DLG1-AS1 Gene

Paralogs for DLG1-AS1 Gene

No data available for Paralogs for DLG1-AS1 Gene

Variants for DLG1-AS1 Gene

Sequence variations from dbSNP and Humsavar for DLG1-AS1 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type
rs10575136 -- 197,296,964(+) GGGGC(-/TAA)CTGCC intron-variant, upstream-variant-2KB
rs111459907 -- 197,297,180(+) TAAAC(C/T)CTCAC intron-variant, upstream-variant-2KB
rs111536435 -- 197,297,219(+) GAATC(A/T)GGAAG nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs111747338 -- 197,300,306(+) TTCTA(-/C)CCCTT intron-variant, upstream-variant-2KB
rs112376681 -- 197,298,718(+) GAGGG(G/T)TGCCA intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DLG1-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv829830 CNV gain 17160897
nsv818205 CNV gain 17921354
nsv593116 CNV gain 21841781
nsv516873 CNV gain+loss 19592680
nsv471149 CNV gain 18288195
nsv428431 CNV gain+loss 18775914
esv3893852 CNV gain 25118596
esv3599304 CNV gain 21293372
esv3599293 CNV gain 21293372
esv2759214 CNV gain+loss 17122850
dgv635n27 CNV gain 19166990
dgv5038n100 CNV gain 25217958

Relevant External Links for DLG1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DLG1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DLG1-AS1 Gene

Disorders for DLG1-AS1 Gene

Relevant External Links for DLG1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DLG1-AS1

No disorders were found for DLG1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DLG1-AS1 Gene

Publications for DLG1-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DLG1-AS1 Gene

Sources for DLG1-AS1 Gene

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