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Aliases for DKFZp779M0652 Gene

Subcategory (RNA class) for DKFZp779M0652 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for DKFZp779M0652 Gene

  • Uncharacterized DKFZp779M0652 3 5

External Ids for DKFZp779M0652 Gene

Previous GeneCards Identifiers for DKFZp779M0652 Gene

  • GC11P045757
  • GC11P045658
  • GC11U900947
  • GC11P045794
  • GC11P045802
  • GC11P045812
  • GC11P045772
  • GC11P045787
  • GC11P045817

Summaries for DKFZp779M0652 Gene

GeneCards Summary for DKFZp779M0652 Gene

DKFZp779M0652 (Uncharacterized DKFZp779M0652) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZp779M0652 Gene

Genomics for DKFZp779M0652 Gene

Regulatory Elements for DKFZp779M0652 Gene

Enhancers for DKFZp779M0652 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F045771 0.2 ENCODE 18.8 +0.5 453 1.6 HDGF SIN3A ZNF48 BRCA1 ZNF2 YY1 ZNF121 GLIS2 ELK1 ZNF207 DKFZp779M0652 SLC35C1 CHST1
GH11F045754 0.7 ENCODE 15.7 -16.2 -16173 2.1 ZFHX2 GATA3 ZMYM3 YY1 EGR2 DKFZp779M0652 SLC35C1 GC11P045831 LOC105376658
GH11F045854 0.5 Ensembl ENCODE 11.5 +86.7 86670 6.2 ATF1 PKNOX1 CREB3L1 SIN3A YY1 FOS ZNF263 JUNB TSHZ1 REST MAPK8IP1 C11orf94 ENSG00000255498 PEX16 LARGE2 DKFZp779M0652 SLC35C1 CRY2
GH11F045723 0.7 ENCODE 11.4 -47.8 -47767 0.2 LOC105376658 DKFZp779M0652 CHST1 GC11P045726 GC11P045727 PIR57131
GH11F045722 0.6 ENCODE 11.4 -49.1 -49147 0.2 PKNOX1 NFYA PBX2 NFYB ZNF512 FOS LOC105376658 DKFZp779M0652 CHST1 LOC100507384 PIR56487
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DKFZp779M0652 on UCSC Golden Path with GeneCards custom track

Promoters for DKFZp779M0652 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001768438 368 1201 HDGF ZNF48 BRCA1 ZNF2 ZNF121 GLIS2 GATA2 ELK1 ZNF207 ZNF143

Genomic Location for DKFZp779M0652 Gene

Chromosome:
11
Start:
45,771,432 bp from pter
End:
45,772,358 bp from pter
Size:
927 bases
Orientation:
Plus strand

Genomic View for DKFZp779M0652 Gene

Genes around DKFZp779M0652 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DKFZp779M0652 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DKFZp779M0652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZp779M0652 Gene

Proteins for DKFZp779M0652 Gene

  • Protein details for DKFZp779M0652 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q6N098
    Recommended name:
    Putative uncharacterized protein DKFZp779M0652
    Protein Accession:
    Q6N098

    Protein attributes for DKFZp779M0652 Gene

    Size:
    120 amino acids
    Molecular mass:
    13055 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DKFZp779M0652 Gene

Post-translational modifications for DKFZp779M0652 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZp779M0652 Gene

Domains & Families for DKFZp779M0652 Gene

Protein Domains for DKFZp779M0652 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DKFZp779M0652: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZp779M0652 Gene

Function for DKFZp779M0652 Gene

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DKFZp779M0652 Gene

Localization for DKFZp779M0652 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DKFZp779M0652 Gene

Pathways & Interactions for DKFZp779M0652 Gene

SuperPathways for DKFZp779M0652 Gene

No Data Available

Interacting Proteins for DKFZp779M0652 Gene

Gene Ontology (GO) - Biological Process for DKFZp779M0652 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DKFZp779M0652 Gene

Transcripts for DKFZp779M0652 Gene

mRNA/cDNA for DKFZp779M0652 Gene

(1) REFSEQ mRNAs :
(4) Additional mRNA sequences :
(19) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DKFZp779M0652 Gene

Uncharacterized DKFZp779M0652:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZp779M0652 Gene

No ASD Table

Relevant External Links for DKFZp779M0652 Gene

GeneLoc Exon Structure for
DKFZp779M0652

Expression for DKFZp779M0652 Gene

mRNA expression in normal human tissues for DKFZp779M0652 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZp779M0652 Gene

This gene is overexpressed in Muscle - Skeletal (x4.9).

SOURCE GeneReport for Unigene cluster for DKFZp779M0652 Gene:

Hs.632142
genes like me logo Genes that share expression patterns with DKFZp779M0652: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DKFZp779M0652 Gene

Orthologs for DKFZp779M0652 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for DKFZp779M0652 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 35
  • 96 (a)
OneToOne
Species where no ortholog for DKFZp779M0652 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DKFZp779M0652 Gene

ENSEMBL:
Gene Tree for DKFZp779M0652 (if available)
TreeFam:
Gene Tree for DKFZp779M0652 (if available)

Paralogs for DKFZp779M0652 Gene

No data available for Paralogs for DKFZp779M0652 Gene

Variants for DKFZp779M0652 Gene

Sequence variations from dbSNP and Humsavar for DKFZp779M0652 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs11038647 -- 45,772,585(+) AGTAG(A/C)GTTTT downstream-variant-500B
rs111667036 -- 45,771,344(+) ATTAG(C/G)ACAGA upstream-variant-2KB
rs113159329 -- 45,769,602(+) TGCCT(G/T)AAGCT upstream-variant-2KB
rs113446993 -- 45,772,125(+) TCCAG(C/G)GGCGC nc-transcript-variant
rs114862995 -- 45,771,824(+) TCTCG(A/G)ACTGT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DKFZp779M0652 Gene

Variant ID Type Subtype PubMed ID
esv3891976 CNV loss 25118596

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for DKFZp779M0652 Gene

Disorders for DKFZp779M0652 Gene

Relevant External Links for DKFZp779M0652

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DKFZp779M0652

No disorders were found for DKFZp779M0652 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DKFZp779M0652 Gene

Publications for DKFZp779M0652 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DKFZp779M0652 Gene

Sources for DKFZp779M0652 Gene

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