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Aliases for DKFZp779M0652 Gene

Subcategory (RNA class) for DKFZp779M0652 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for DKFZp779M0652 Gene

  • Uncharacterized DKFZp779M0652 3

External Ids for DKFZp779M0652 Gene

Previous GeneCards Identifiers for DKFZp779M0652 Gene

  • GC11P045757
  • GC11P045658
  • GC11U900947
  • GC11P045794
  • GC11P045802

Summaries for DKFZp779M0652 Gene

GeneCards Summary for DKFZp779M0652 Gene

DKFZp779M0652 (Uncharacterized DKFZp779M0652) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZp779M0652 Gene

Genomics for DKFZp779M0652 Gene

Regulatory Elements for DKFZp779M0652 Gene

Genomic Location for DKFZp779M0652 Gene

Start:
45,771,432 bp from pter
End:
45,772,358 bp from pter
Size:
927 bases
Orientation:
Plus strand

Genomic View for DKFZp779M0652 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DKFZp779M0652 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZp779M0652 Gene

Proteins for DKFZp779M0652 Gene

  • Protein details for DKFZp779M0652 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q6N098
    Recommended name:
    Putative uncharacterized protein DKFZp779M0652
    Protein Accession:
    Q6N098
    Secondary Accessions:

    Protein attributes for DKFZp779M0652 Gene

    Size:
    120 amino acids
    Molecular mass:
    13055 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DKFZp779M0652 Gene

Proteomics data for DKFZp779M0652 Gene at MOPED

Post-translational modifications for DKFZp779M0652 Gene

No Post-translational modifications

Other Protein References for DKFZp779M0652 Gene

ENSEMBL proteins:

No data available for DME Specific Peptides for DKFZp779M0652 Gene

Domains for DKFZp779M0652 Gene

Protein Domains for DKFZp779M0652 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DKFZp779M0652: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZp779M0652 Gene

Function for DKFZp779M0652 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DKFZp779M0652 Gene

Localization for DKFZp779M0652 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DKFZp779M0652 Gene COMPARTMENTS Subcellular localization image for DKFZp779M0652 gene
Compartment Confidence
cytosol 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for DKFZp779M0652 Gene

Pathways for DKFZp779M0652 Gene

SuperPathways for DKFZp779M0652 Gene

No Data Available

Interacting Proteins for DKFZp779M0652 Gene

Gene Ontology (GO) - Biological Process for DKFZp779M0652 Gene

None

No data available for Pathways by source for DKFZp779M0652 Gene

Transcripts for DKFZp779M0652 Gene

mRNA/cDNA for DKFZp779M0652 Gene

(19) Selected AceView cDNA sequences:
(4) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DKFZp779M0652 Gene

Uncharacterized DKFZp779M0652:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZp779M0652 Gene

No ASD Table

Relevant External Links for DKFZp779M0652 Gene

GeneLoc Exon Structure for
DKFZp779M0652

Expression for DKFZp779M0652 Gene

mRNA expression in normal human tissues for DKFZp779M0652 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZp779M0652 Gene

This gene is overexpressed in Muscle - Skeletal (4.9).

SOURCE GeneReport for Unigene cluster for DKFZp779M0652 Gene Hs.632142

genes like me logo Genes that share expressions with DKFZp779M0652: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for DKFZp779M0652 Gene

Orthologs for DKFZp779M0652 Gene

This gene was present in the common ancestor of human and chimp.

Orthologs for DKFZp779M0652 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia -- 36
  • 96 (a)
OneToOne
Species with no ortholog for DKFZp779M0652:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DKFZp779M0652 Gene

ENSEMBL:
Gene Tree for DKFZp779M0652 (if available)
TreeFam:
Gene Tree for DKFZp779M0652 (if available)

Paralogs for DKFZp779M0652 Gene

No data available for Paralogs for DKFZp779M0652 Gene

Variants for DKFZp779M0652 Gene

Sequence variations from dbSNP and Humsavar for DKFZp779M0652 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs2666890 -- 45,771,472(+) CGGAG(G/T)TATGG nc-transcript-variant
rs2666891 -- 45,771,667(+) GCTCT(C/G)GGGCG nc-transcript-variant
rs3740704 -- 45,771,603(-) GACAG(G/T)TTCTG nc-transcript-variant
rs11038647 -- 45,772,585(+) AGTAG(A/C)GTTTT downstream-variant-500B
rs12291940 -- 45,770,770(+) atgcc(C/T)ggccT upstream-variant-2KB

Relevant External Links for DKFZp779M0652 Gene

HapMap Linkage Disequilibrium report
DKFZp779M0652

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for DKFZp779M0652 Gene

Disorders for DKFZp779M0652 Gene

No disorders were found for DKFZp779M0652 Gene.

No data available for UniProtKB/Swiss-Prot for DKFZp779M0652 Gene

Publications for DKFZp779M0652 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for DKFZp779M0652 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DKFZp779M0652
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DKFZp779M0652
    • Block miRNA regulation of DKFZp779M0652 using miScript Target Protectors

    Sources for DKFZp779M0652 Gene

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