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Aliases for DKFZp686K1684 Gene

Subcategory (RNA class) for DKFZp686K1684 Gene

antisense

Quality Score for this RNA gene is

1

Aliases for DKFZp686K1684 Gene

  • Uncharacterized LOC440034 3

External Ids for DKFZp686K1684 Gene

ORGUL Members for DKFZp686K1684 Gene

Previous GeneCards Identifiers for DKFZp686K1684 Gene

  • GC11P031795
  • GC11U900704
  • GC11P031839

Summaries for DKFZp686K1684 Gene

GeneCards Summary for DKFZp686K1684 Gene

DKFZp686K1684 (Uncharacterized LOC440034) is an RNA Gene, and is affiliated with the antisense RNA class.

fRNAdb sequence ontologies for DKFZp686K1684 Gene

  • antisense_RNA: Antisense RNA is RNA that is transcribed from the coding, rather than the template, strand of DNA. It is therefore complementary to mRNA.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary and piRNA Summary for DKFZp686K1684 Gene

Genomics for DKFZp686K1684 Gene

Genomic Location for DKFZp686K1684 Gene

Start:
31,816,566 bp from pter
End:
31,887,041 bp from pter
Size:
70,476 bases
Orientation:
Plus strand

Genomic View for DKFZp686K1684 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DKFZp686K1684 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZp686K1684 Gene

No data available for Regulatory Elements for DKFZp686K1684 Gene

Proteins for DKFZp686K1684 Gene

Post-translational modifications for DKFZp686K1684 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZp686K1684 Gene

Domains for DKFZp686K1684 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZp686K1684 Gene

Function for DKFZp686K1684 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DKFZp686K1684 Gene

Localization for DKFZp686K1684 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DKFZp686K1684 Gene

Pathways for DKFZp686K1684 Gene

SuperPathways for DKFZp686K1684 Gene

No Data Available

Interacting Proteins for DKFZp686K1684 Gene

Gene Ontology (GO) - Biological Process for DKFZp686K1684 Gene

None

No data available for Pathways by source for DKFZp686K1684 Gene

Transcripts for DKFZp686K1684 Gene

mRNA/cDNA for DKFZp686K1684 Gene

(1) Selected AceView cDNA sequences:
(2) Additional mRNA sequences :

Unigene Clusters for DKFZp686K1684 Gene

Uncharacterized LOC440034:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DKFZp686K1684
    • Block miRNA regulation of DKFZp686K1684 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for DKFZp686K1684

    Primer Products

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for DKFZp686K1684 Gene

    No ASD Table

    Relevant External Links for DKFZp686K1684 Gene

    GeneLoc Exon Structure for
    DKFZp686K1684

    Expression for DKFZp686K1684 Gene

    SOURCE GeneReport for Unigene cluster for DKFZp686K1684 Gene Hs.523576

    No Expression Related Data Available

    In Situ Assay Products

    No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for DKFZp686K1684 Gene

    Orthologs for DKFZp686K1684 Gene

    No data available for Orthologs and Evolution for DKFZp686K1684 Gene

    Paralogs for DKFZp686K1684 Gene

    No data available for Paralogs for DKFZp686K1684 Gene

    Variants for DKFZp686K1684 Gene

    Sequence variations from dbSNP and Humsavar for DKFZp686K1684 Gene

    SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
    rs483281 -- 31,820,831(-) GAAAA(A/G)CGACA intron-variant
    rs584762 -- 31,849,212(-) GCAGC(A/C)ACAAC intron-variant
    rs585972 -- 31,843,064(-) ctggg(A/G)tcagg intron-variant
    rs594462 -- 31,862,821(-) agcac(A/G)cagca intron-variant
    rs601068 -- 31,867,471(-) CAGGC(A/G)GTCTC intron-variant

    Structural Variations from Database of Genomic Variants (DGV) for DKFZp686K1684 Gene

    Variant ID Type Subtype PubMed ID
    nsv825815 CNV Gain 20364138
    nsv7728 CNV Loss 18451855
    nsv897188 CNV Loss 21882294
    esv2660764 CNV Deletion 23128226

    Relevant External Links for DKFZp686K1684 Gene

    HapMap Linkage Disequilibrium report
    DKFZp686K1684

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DKFZp686K1684 Gene

    Disorders for DKFZp686K1684 Gene

    No disorders were found for DKFZp686K1684 Gene.

    No data available for UniProtKB/Swiss-Prot for DKFZp686K1684 Gene

    Publications for DKFZp686K1684 Gene

    1. Meta-analysis identifies common variants associated with body mass index in east Asians. (PMID: 22344219) Wen W. … Shu X.O. (Nat. Genet. 2012) 3
    2. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. (PMID: 23319000) Luykx J.J. … Ophoff R.A. (Mol. Psychiatry 2013) 3

    Products for DKFZp686K1684 Gene

    Sources for DKFZp686K1684 Gene

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