DKFZp667F0711 Gene
protein-coding GIFtS: 22
GCID: GC10P006432
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DKFZp667F0711
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Aliases
for DKFZp667F0711 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
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| Uncharacterized Protein DKFZp667F07112 | | Uncharacterized Protein4 |
Export aliases for DKFZp667F0711 gene to outside databasesPrevious GC identifers: GC10P006397 GC10U900726 |
Summaries
for DKFZp667F0711 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
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Genomic Views
for DKFZp667F0711 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000010.10 NT_008705.16 NC_018921.1
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the DKFZp667F0711 gene promoter:
STAT5B NF-1 Nkx2-5 STAT5A C/EBPalpha RORalpha1 Ik-2 Chx10 LyF-1
Other transcription factors
Search SABiosciences Chromatin IP Primers for DKFZp667F0711
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DKFZp667F0711 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 10p15.1 Ensembl cytogenetic band: 10p15.1 DKFZp667F0711 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 10 GeneLoc Exon Structure GeneLoc location for GC10P006432: view genomic region
(about GC identifiers)
Start:
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6,392,278 bp from pter |
End:
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6,394,723 bp from pter |
Size:
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2,446 bases |
Orientation:
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plus strand |
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Proteins
for DKFZp667F0711 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/TrEMBL: Q8TCQ9 (See
protein sequence)Recommended Name: Putative uncharacterized protein DKFZp667F0711 Size: 183 amino acids; 20952 DaDKFZp667F0711 Protein expression data from MOPED and PaxDb: About this image 
ENSEMBL proteins: ENSP00000375259
Human Recombinant Protein Products for DKFZp667F0711:
DKFZp667F0711 Antibody Products:
Assay Products for DKFZp667F0711: |
Protein
Domains /
Families
for DKFZp667F0711 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: Q8TCQ9 |
Function
for DKFZp667F0711 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
inGenious Targeting Laboratory,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase,
shRNA from
OriGene,
Sirion Biotech,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Sirion Biotech,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
Sirion Biotech,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
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Animal Models:
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DKFZp667F0711 |
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Pathways & Interactions
for DKFZp667F0711 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
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Interactions:
Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for DKFZp667F0711
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Drugs & Compounds
for DKFZp667F0711 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
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 Browse Tocris compounds for DKFZp667F0711
Search CenterWatch for drugs/clinical trials and news about DKFZp667F0711 
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Transcripts
for DKFZp667F0711 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
Sirion Biotech,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
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Unigene Cluster for DKFZp667F0711: Uncharacterized protein DKFZp667F0711 Hs.737229 Unigene Representative Sequence: AL7137531 Ensembl transcript including schematic representation, and UCSC links where relevant: ENST00000391437
Additional cDNA sequence: AL713753.1 XR_109003.1 XR_111042.1 XR_171833.1 1 DOTS entry: DT.65284811 7 AceView cDNA sequences: AI682594 AI138216 AA825193 AW571974 BQ029464 AL713753 BF919398
GeneLoc Exon Structure
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Expression
for DKFZp667F0711 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| DKFZp667F0711 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GTGAATTGAT
About this image
See DKFZp667F0711 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for DKFZp667F0711
SOURCE GeneReport for Unigene cluster: Hs.737229
SABiosciences Custom PCR Arrays for DKFZp667F0711
Primer
Products: |  | Browse OriGene genome-wide validated SYBR primer pairs
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse / rat DKFZp667F0711 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DKFZp667F0711 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DKFZp667F0711 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DKFZp667F0711 |
Orthologs
for DKFZp667F0711 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
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ENSEMBL Gene Tree for DKFZp667F0711 (if available)
TreeFam Gene Tree for DKFZp667F0711 (if available) |
Paralogs
for DKFZp667F0711 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| -- |
Genomic Variants
for DKFZp667F0711 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
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| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 10 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
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HapMap Linkage Disequilibrium report for DKFZp667F0711 (6392278 - 6394723 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV) variations for DKFZp667F0711: -- | SABiosciences Cancer Mutation PCR Assays |
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Disorders
/ Diseases
for DKFZp667F0711 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
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DKFZp667F0711 for disorders About GeneDecksing
2  diseases for DKFZp667F0711: About MalaCardsrheumatoid arthritis arthritis
Export disorders for DKFZp667F0711 gene to outside databases
|
Publications
for DKFZp667F0711 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
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PubMed articles for DKFZp667F0711 gene integrated from 9 sources:
(articles sorted by number of sources associating them with DKFZp667F0711) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Genome-wide association study meta-analysis identifie s seven new rheumatoid arthritis risk loci. (PubMed id 20453842)1 Stahl E.A....Plenge R.M. (2010)
- Meta-analysis of genome-wide association study data identifies additional type 1 diabetes risk loci. (PubMed id 18978792)1 Cooper J.D....Todd J.A. (2008)
- Common variants at CD40 and other loci confer risk of rheumatoid arthritis. (PubMed id 18794853)1 Raychaudhuri S....Plenge R.M. (2008)
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External Searches for DKFZp667F0711 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
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Genome Databases showing DKFZp667F0711 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
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Other Databases showing DKFZp667F0711 gene
(According to HUGE)
About This Section
| -- |
Specialized Databases showing DKFZp667F0711 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
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About This Section
| Patent Information for DKFZp667F0711 gene:
Search GeneIP for patents involving DKFZp667F0711
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Products
for DKFZp667F0711 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0 and Sirion Biotech, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript, LifeMap BioReagents, and Sirion Biotech, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences, In Situ Hybridization Assays from
Advanced Cell Diagnostics, Animal models from inGenious Targeting Laboratory)
About This Section
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|  | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat DKFZp667F0711 | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing DKFZp667F0711 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DKFZp667F0711 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DKFZp667F0711 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DKFZp667F0711 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DKFZp667F0711 |
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 | | | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DKFZp667F0711 |
|  |  |  |  | | | | | Search Vector BioLabs for ready-to-use adenovirus/AAV for human, mouse, rat DKFZp667F0711 |
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