Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DKFZp434J0226 Gene

Subcategory (RNA class) for DKFZp434J0226 Gene

processed_transcript

Quality Score for this RNA gene is

2

Aliases for DKFZp434J0226 Gene

  • Uncharacterized LOC93429 3

External Ids for DKFZp434J0226 Gene

Summaries for DKFZp434J0226 Gene

GeneCards Summary for DKFZp434J0226 Gene

DKFZp434J0226 (Uncharacterized LOC93429) is a RNA Gene, and belongs to processed_transcript RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZp434J0226 Gene

Genomics for DKFZp434J0226 Gene

Genomic Location for DKFZp434J0226 Gene

Start:
46,203,426 bp from pter
End:
46,214,838 bp from pter
Size:
11,413 bases
Orientation:
Plus strand

Genomic View for DKFZp434J0226 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DKFZp434J0226 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZp434J0226 Gene

Regulatory Elements for DKFZp434J0226 Gene

Transcription factor binding sites by QIAGEN in the DKFZp434J0226 gene promoter:

Proteins for DKFZp434J0226 Gene

Post-translational modifications for DKFZp434J0226 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZp434J0226 Gene

Domains for DKFZp434J0226 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for DKFZp434J0226 Gene

Function for DKFZp434J0226 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DKFZp434J0226 Gene

Localization for DKFZp434J0226 Gene

No data available for Gene Ontology (GO) - Cellular Components for DKFZp434J0226 Gene

Pathways for DKFZp434J0226 Gene

SuperPathways for DKFZp434J0226 Gene

No Data Available

Interacting Proteins for DKFZp434J0226 Gene

Gene Ontology (GO) - Biological Process for DKFZp434J0226 Gene

None

No data available for Pathways by source for DKFZp434J0226 Gene

Transcripts for DKFZp434J0226 Gene

mRNA/cDNA for DKFZp434J0226 Gene

(2) Additional mRNA sequences :
(3) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DKFZp434J0226 Gene

Uncharacterized LOC93429:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZp434J0226 Gene

No ASD Table

Relevant External Links for DKFZp434J0226 Gene

GeneLoc Exon Structure for
DKFZp434J0226

Expression for DKFZp434J0226 Gene

mRNA expression in normal human tissues for DKFZp434J0226 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZp434J0226 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (6.2), Pituitary (5.6), Skin - Not Sun Exposed (Suprapubic) (5.5), and Testis (5.1).

SOURCE GeneReport for Unigene cluster for DKFZp434J0226 Gene Hs.569940

genes like me logo Genes that share expressions with DKFZp434J0226: view

Orthologs for DKFZp434J0226 Gene

Evolution for DKFZp434J0226 Gene

ENSEMBL:
Gene Tree for DKFZp434J0226 (if available)
TreeFam:
Gene Tree for DKFZp434J0226 (if available)

No data available for Orthologs for DKFZp434J0226 Gene

Paralogs for DKFZp434J0226 Gene

No data available for Paralogs for DKFZp434J0226 Gene

Variants for DKFZp434J0226 Gene

Sequence variations from dbSNP and Humsavar for DKFZp434J0226 Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs2253940 -- 46,209,940(+) AAACA(C/T)ACACA upstream-variant-2KB
rs2286801 -- 46,210,248(+) CCTTG(A/G)TGTTC nc-transcript-variant
rs3059258 -- 46,209,557(+) CTTTC(-/TTTC)ACTGC upstream-variant-2KB
rs3059261 -- 46,212,636(+) TCCAC(-/CAC)CAGAA intron-variant
rs3059263 -- 46,212,737(+) CTCTC(-/TC/TCTC)CTCTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DKFZp434J0226 Gene

Variant ID Type Subtype PubMed ID
nsv912179 CNV Gain 21882294
nsv470147 CNV Gain 18288195
nsv458713 CNV Gain 19166990
nsv458714 CNV Gain 19166990
nsv912180 CNV Gain 21882294
dgv3960n71 CNV Gain 21882294

Relevant External Links for DKFZp434J0226 Gene

HapMap Linkage Disequilibrium report
DKFZp434J0226

Disorders for DKFZp434J0226 Gene

Relevant External Links for DKFZp434J0226

Genetic Association Database (GAD)
DKFZp434J0226
genes like me logo Genes that share disorders with DKFZp434J0226: view

No data available for UniProtKB/Swiss-Prot for DKFZp434J0226 Gene

Publications for DKFZp434J0226 Gene

  1. Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution. (PMID: 11441184) Dehal P. … Stubbs L. (Science 2001) 3

Products for DKFZp434J0226 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DKFZp434J0226
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DKFZp434J0226
    • Block miRNA regulation of DKFZp434J0226 using miScript Target Protectors

    Sources for DKFZp434J0226 Gene

    Back to Top

    Content