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Aliases for DKFZP586I1420 Gene

Aliases for DKFZP586I1420 Gene

  • Uncharacterized Protein DKFZp586I1420 3
  • AC006978.1 5

External Ids for DKFZP586I1420 Gene

Previous GeneCards Identifiers for DKFZP586I1420 Gene

  • GC07P030378
  • GC07P030410
  • GC07P030411
  • GC07P030413

Summaries for DKFZP586I1420 Gene

GeneCards Summary for DKFZP586I1420 Gene

DKFZP586I1420 (Uncharacterized Protein DKFZp586I1420) is a Pseudogene.

Additional gene information for DKFZP586I1420 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZP586I1420 Gene

Genomics for DKFZP586I1420 Gene

GeneHancer (GH) Regulatory Elements for DKFZP586I1420 Gene

Promoters and enhancers for DKFZP586I1420 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I030501 Promoter/Enhancer 2 EPDnew Ensembl ENCODE 20.1 +133.8 133796 4 HDGF PKNOX1 SMAD1 ARID4B SIN3A DMAP1 ZNF2 YY1 POLR2B E2F8 GGCT ENSG00000196295 ENSG00000226874 ENSG00000263683 DKFZP586I1420 NOD1 ENSG00000281039
GH07I030133 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 11.6 -234.7 -234681 2.9 ATF1 ARID4B SIN3A DMAP1 BRCA1 ZNF48 GLIS2 E2F8 FOS ATF7 MTURN LOC105375216 ENSG00000226874 DKFZP586I1420 ENSG00000263683 PLEKHA8 ENSG00000230751
GH07I030025 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 10.2 -342.1 -342050 5.3 PKNOX1 FOXA2 SMAD1 MLX ZFP64 ARID4B NEUROD1 SIN3A DMAP1 ZBTB7B PLEKHA8 FKBP14 SCRN1 ENSG00000226874 ENSG00000263683 LOC105375215 DKFZP586I1420 ENSG00000231519
GH07I030289 Enhancer 1 Ensembl ENCODE 7.6 -79.7 -79673 1.6 CTCF HDGF HDAC1 PKNOX1 SIN3A BATF ZNF507 ZNF335 GATA3 CBFA2T2 MIR550B1 MIR550A1 GC07P030289 DKFZP586I1420 ZNRF2 GC07P030343
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DKFZP586I1420 on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the DKFZP586I1420 gene promoter:

Genomic Locations for DKFZP586I1420 Gene

Genomic Locations for DKFZP586I1420 Gene
chr7:30,370,050-30,372,809
(GRCh38/hg38)
Size:
2,760 bases
Orientation:
Plus strand
chr7:30,409,666-30,412,425
(GRCh37/hg19)

Genomic View for DKFZP586I1420 Gene

Genes around DKFZP586I1420 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DKFZP586I1420 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DKFZP586I1420 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZP586I1420 Gene

Proteins for DKFZP586I1420 Gene

Post-translational modifications for DKFZP586I1420 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZP586I1420 Gene

Domains & Families for DKFZP586I1420 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZP586I1420 Gene

Function for DKFZP586I1420 Gene

Phenotypes From GWAS Catalog for DKFZP586I1420 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DKFZP586I1420 Gene

Localization for DKFZP586I1420 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DKFZP586I1420 Gene

Pathways & Interactions for DKFZP586I1420 Gene

SuperPathways for DKFZP586I1420 Gene

No Data Available

Interacting Proteins for DKFZP586I1420 Gene

Gene Ontology (GO) - Biological Process for DKFZP586I1420 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DKFZP586I1420 Gene

Drugs & Compounds for DKFZP586I1420 Gene

No Compound Related Data Available

Transcripts for DKFZP586I1420 Gene

mRNA/cDNA for DKFZP586I1420 Gene

Unigene Clusters for DKFZP586I1420 Gene

Uncharacterized protein DKFZp586I1420:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZP586I1420 Gene

No ASD Table

Relevant External Links for DKFZP586I1420 Gene

GeneLoc Exon Structure for
DKFZP586I1420

Expression for DKFZP586I1420 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DKFZP586I1420 Gene

SOURCE GeneReport for Unigene cluster for DKFZP586I1420 Gene:

Hs.112423
genes like me logo Genes that share expression patterns with DKFZP586I1420: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DKFZP586I1420 Gene

Orthologs for DKFZP586I1420 Gene

Evolution for DKFZP586I1420 Gene

ENSEMBL:
Gene Tree for DKFZP586I1420 (if available)
TreeFam:
Gene Tree for DKFZP586I1420 (if available)

No data available for Orthologs for DKFZP586I1420 Gene

Paralogs for DKFZP586I1420 Gene

No data available for Paralogs for DKFZP586I1420 Gene

Variants for DKFZP586I1420 Gene

Sequence variations from dbSNP and Humsavar for DKFZP586I1420 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000529315 -- 30,370,029(+) A/G upstream_transcript_variant
rs1000544993 -- 30,370,146(+) G/A non_coding_transcript_variant
rs1001168140 -- 30,370,439(+) A/C non_coding_transcript_variant
rs1001264381 -- 30,373,228(+) G/A downstream_transcript_variant
rs1001924363 -- 30,373,185(+) T/C downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for DKFZP586I1420 Gene

Variant ID Type Subtype PubMed ID
nsv1019527 CNV gain 25217958
nsv1068321 OTHER inversion 25765185
nsv1148830 OTHER inversion 26484159
nsv436557 CNV deletion 17901297
nsv523514 CNV gain 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for DKFZP586I1420 Gene

Disorders for DKFZP586I1420 Gene

Additional Disease Information for DKFZP586I1420

No disorders were found for DKFZP586I1420 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DKFZP586I1420 Gene

Publications for DKFZP586I1420 Gene

  1. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer SW … Tsui LC (Science (New York, N.Y.) 2003) 3 58
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for DKFZP586I1420 Gene

Sources for DKFZP586I1420 Gene

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