Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DKFZP434L187 Gene

Subcategory (RNA class) for DKFZP434L187 Gene

lncRNA

Quality Score for this RNA gene is

2

Aliases for DKFZP434L187 Gene

  • Uncharacterized LOC26082 3

External Ids for DKFZP434L187 Gene

ORGUL Members for DKFZP434L187 Gene

Summaries for DKFZP434L187 Gene

GeneCards Summary for DKFZP434L187 Gene

DKFZP434L187 (Uncharacterized LOC26082) is an RNA Gene, and belongs to the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZP434L187 Gene

Genomics for DKFZP434L187 Gene

Genomic Location for DKFZP434L187 Gene

Start:
30,196,036 bp from pter
End:
30,214,540 bp from pter
Size:
18,505 bases
Orientation:
Plus strand

Genomic View for DKFZP434L187 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DKFZP434L187 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZP434L187 Gene

Regulatory Elements for DKFZP434L187 Gene

Proteins for DKFZP434L187 Gene

Post-translational modifications for DKFZP434L187 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZP434L187 Gene

Domains for DKFZP434L187 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZP434L187 Gene

Function for DKFZP434L187 Gene

Phenotypes for DKFZP434L187 Gene

GenomeRNAi human phenotypes for DKFZP434L187:
genes like me logo Genes that share phenotypes with DKFZP434L187: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DKFZP434L187 Gene

Localization for DKFZP434L187 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DKFZP434L187 Gene

Pathways for DKFZP434L187 Gene

SuperPathways for DKFZP434L187 Gene

No Data Available

Interacting Proteins for DKFZP434L187 Gene

Gene Ontology (GO) - Biological Process for DKFZP434L187 Gene

None

No data available for Pathways by source for DKFZP434L187 Gene

Transcripts for DKFZP434L187 Gene

mRNA/cDNA for DKFZP434L187 Gene

Unigene Clusters for DKFZP434L187 Gene

Uncharacterized LOC26082:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZP434L187 Gene

No ASD Table

Relevant External Links for DKFZP434L187 Gene

GeneLoc Exon Structure for
DKFZP434L187

Expression for DKFZP434L187 Gene

mRNA expression in normal human tissues for DKFZP434L187 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZP434L187 Gene

This gene is overexpressed in Brain - Caudate (basal ganglia) (10.4), Brain - Putamen (basal ganglia) (10.1), Testis (8.4), and Brain - Nucleus accumbens (basal ganglia) (4.7).

SOURCE GeneReport for Unigene cluster for DKFZP434L187 Gene Hs.652128

genes like me logo Genes that share expressions with DKFZP434L187: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for DKFZP434L187 Gene

Orthologs for DKFZP434L187 Gene

Evolution for DKFZP434L187 Gene

ENSEMBL:
Gene Tree for DKFZP434L187 (if available)
TreeFam:
Gene Tree for DKFZP434L187 (if available)

No data available for Orthologs for DKFZP434L187 Gene

Paralogs for DKFZP434L187 Gene

No data available for Paralogs for DKFZP434L187 Gene

Variants for DKFZP434L187 Gene

Sequence variations from dbSNP and Humsavar for DKFZP434L187 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type MAF
rs1502162 -- 30,211,262(-) CCTTG(A/G)TTTCC nc-transcript-variant
rs1502163 -- 30,194,843(-) AATGA(A/G)AAACG upstream-variant-2KB
rs1809951 -- 30,194,509(-) ACCCA(A/G)TCCTT upstream-variant-2KB
rs1847112 -- 30,194,783(-) CCTGA(A/G)AACCT upstream-variant-2KB
rs1847113 -- 30,194,727(-) GTGAA(A/G)AATTA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DKFZP434L187 Gene

Variant ID Type Subtype PubMed ID
esv2751526 CNV Loss 17911159
esv2751527 CNV Gain 17911159
dgv716e1 CNV Complex 17122850
nsv428300 CNV Loss 18775914
dgv717e1 CNV Complex 17122850
nsv832946 CNV Gain+Loss 17160897
nsv518720 CNV Gain 19592680
nsv903757 CNV Gain 21882294
nsv9232 CNV Gain+Loss 18304495
nsv903759 CNV Gain 21882294
nsv821679 CNV Gain 15273396
dgv2293n71 CNV Loss 21882294
esv26291 CNV Gain+Loss 19812545
nsv509563 CNV Insertion 20534489
nsv442695 CNV CNV 18776908
dgv2294n71 CNV Loss 21882294
dgv2295n71 CNV Loss 21882294
dgv2296n71 CNV Loss 21882294
dgv2297n71 CNV Loss 21882294
dgv2298n71 CNV Loss 21882294
dgv718e1 CNV Complex 17122850
nsv903776 CNV Gain 21882294
nsv903777 CNV Gain 21882294
esv2421738 CNV Duplication 20811451
dgv719e1 CNV Complex 17122850
nsv469713 CNV Complex 16826518
nsv471679 CNV Loss 15918152
nsv100 CNV Insertion 15895083
nsv1475 CNV Insertion 18451855
nsv102 CNV Insertion 15895083

Relevant External Links for DKFZP434L187 Gene

HapMap Linkage Disequilibrium report
DKFZP434L187

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DKFZP434L187 Gene

Disorders for DKFZP434L187 Gene

No disorders were found for DKFZP434L187 Gene.

No data available for UniProtKB/Swiss-Prot for DKFZP434L187 Gene

Publications for DKFZP434L187 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for DKFZP434L187 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DKFZP434L187
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for DKFZP434L187
    • Block miRNA regulation of DKFZP434L187 using miScript Target Protectors

    Sources for DKFZP434L187 Gene

    Back to Top

    Content