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Aliases for DKFZP434K028 Gene

Subcategory (RNA class) for DKFZP434K028 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for DKFZP434K028 Gene

  • Uncharacterized LOC26070 3 5

External Ids for DKFZP434K028 Gene

Previous GeneCards Identifiers for DKFZP434K028 Gene

  • GC11M064028
  • GC11M063090
  • GC11U900123
  • GC11M061522

Summaries for DKFZP434K028 Gene

GeneCards Summary for DKFZP434K028 Gene

DKFZP434K028 (Uncharacterized LOC26070) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZP434K028 Gene

Genomics for DKFZP434K028 Gene

Regulatory Elements for DKFZP434K028 Gene

Enhancers for DKFZP434K028 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11G061693 1.9 FANTOM5 Ensembl ENCODE dbSUPER 19.3 +59.7 59740 8.5 PKNOX1 SIN3A ZBTB7B FOS DEK ZNF263 ZHX2 REST SMARCB1 ZNF592 MYRF DKFZP434K028 DAGLA SYT7 FTH1 CYB561A3 VWCE SDHAF2 DDB1 CPSF7
GH11G061752 2 FANTOM5 Ensembl ENCODE dbSUPER 9.6 +1.6 1559 7.7 HDGF PKNOX1 SIN3A DMAP1 YBX1 YY1 ZNF766 ZNF143 ZNF207 FOS MYRF DKFZP434K028 TKFC INCENP
GH11G061681 1.2 ENCODE dbSUPER 15.2 +75.0 74987 2.9 FOXA2 MLX ARID4B DMAP1 ZNF48 SLC30A9 FOS SP5 ZHX2 MXD4 MYRF DKFZP434K028 DAGLA PIR41833
GH11G061796 1.4 Ensembl ENCODE dbSUPER 11.7 -40.2 -40158 2.0 TBL1XR1 AGO1 ZBTB40 ZNF2 RAD21 RFX5 YY1 SCRT2 ZNF143 MIXL1 FADS2 FADS1 DKFZP434K028 BEST1 MIR1908
GH11G061921 1.7 FANTOM5 Ensembl ENCODE dbSUPER 9.3 -166.2 -166236 4.0 ATF1 FOXA2 ARID4B ZNF48 SP5 NCOA1 REST KAT8 GLIS1 NR2C1 RAB3IL1 FADS3 BEST1 FADS1 FTH1 DKFZP434K028 MYRF GC11P061939 PIR40157
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DKFZP434K028 on UCSC Golden Path with GeneCards custom track

Genomic Location for DKFZP434K028 Gene

Chromosome:
11
Start:
61,746,493 bp from pter
End:
61,757,664 bp from pter
Size:
11,172 bases
Orientation:
Minus strand

Genomic View for DKFZP434K028 Gene

Genes around DKFZP434K028 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DKFZP434K028 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DKFZP434K028 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZP434K028 Gene

Proteins for DKFZP434K028 Gene

Post-translational modifications for DKFZP434K028 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZP434K028 Gene

Domains & Families for DKFZP434K028 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZP434K028 Gene

Function for DKFZP434K028 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DKFZP434K028 Gene

Localization for DKFZP434K028 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DKFZP434K028 Gene

Pathways & Interactions for DKFZP434K028 Gene

SuperPathways for DKFZP434K028 Gene

No Data Available

Interacting Proteins for DKFZP434K028 Gene

Gene Ontology (GO) - Biological Process for DKFZP434K028 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DKFZP434K028 Gene

Drugs & Compounds for DKFZP434K028 Gene

No Compound Related Data Available

Transcripts for DKFZP434K028 Gene

mRNA/cDNA for DKFZP434K028 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DKFZP434K028 Gene

Uncharacterized LOC26070:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZP434K028 Gene

No ASD Table

Relevant External Links for DKFZP434K028 Gene

GeneLoc Exon Structure for
DKFZP434K028

Expression for DKFZP434K028 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DKFZP434K028 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZP434K028 Gene

This gene is overexpressed in Testis (x37.6).

Protein differential expression in normal tissues from HIPED for DKFZP434K028 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for DKFZP434K028 Gene



Protein tissue co-expression partners for DKFZP434K028 Gene

SOURCE GeneReport for Unigene cluster for DKFZP434K028 Gene:

Hs.564254
genes like me logo Genes that share expression patterns with DKFZP434K028: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DKFZP434K028 Gene

Orthologs for DKFZP434K028 Gene

Evolution for DKFZP434K028 Gene

ENSEMBL:
Gene Tree for DKFZP434K028 (if available)
TreeFam:
Gene Tree for DKFZP434K028 (if available)

No data available for Orthologs for DKFZP434K028 Gene

Paralogs for DKFZP434K028 Gene

No data available for Paralogs for DKFZP434K028 Gene

Variants for DKFZP434K028 Gene

Sequence variations from dbSNP and Humsavar for DKFZP434K028 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs1000955626 -- 61,754,068(+) TCAGG(A/G)CTACA intron-variant, nc-transcript-variant, upstream-variant-2KB
rs1001207069 -- 61,759,586(+) AATCA(C/T)TTGAA intron-variant, upstream-variant-2KB
rs1001968561 -- 61,759,218(+) GTCGC(A/G)GCTGC intron-variant, upstream-variant-2KB
rs1002303601 -- 61,754,931(+) AGTGG(C/G)AGGGC intron-variant, upstream-variant-2KB
rs1002355991 -- 61,754,694(+) CTGGC(A/C/G/T)GGGGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DKFZP434K028 Gene

Variant ID Type Subtype PubMed ID
nsv528697 CNV loss 19592680
nsv832179 CNV loss 17160897
nsv952459 CNV deletion 24416366

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for DKFZP434K028 Gene

Disorders for DKFZP434K028 Gene

Relevant External Links for DKFZP434K028

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DKFZP434K028

No disorders were found for DKFZP434K028 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DKFZP434K028 Gene

Publications for DKFZP434K028 Gene

  1. Protein interaction discovery using parallel analysis of translated ORFs (PLATO). (PMID: 23503679) Zhu J. … Elledge S.J. (Nat. Biotechnol. 2013) 3 64
  2. Protein array based interactome analysis of amyloid-I^ indicates an inhibition of protein translation. (PMID: 21244100) Virok D.P. … FA1lAPp L. (J. Proteome Res. 2011) 3 64
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DKFZP434K028 Gene

Sources for DKFZP434K028 Gene

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