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Aliases for DKFZP434K028 Gene

Subcategory (RNA class) for DKFZP434K028 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for DKFZP434K028 Gene

  • Uncharacterized LOC26070 3 5

External Ids for DKFZP434K028 Gene

Previous GeneCards Identifiers for DKFZP434K028 Gene

  • GC11M064028
  • GC11M063090
  • GC11U900123
  • GC11M061522

Summaries for DKFZP434K028 Gene

GeneCards Summary for DKFZP434K028 Gene

DKFZP434K028 (Uncharacterized LOC26070) is an RNA Gene, and is affiliated with the ncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DKFZP434K028 Gene

Genomics for DKFZP434K028 Gene

Regulatory Elements for DKFZP434K028 Gene

Enhancers for DKFZP434K028 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH11F061693 1.6 FANTOM5 Ensembl ENCODE 19.3 +59.2 59163 9.8 PKNOX1 SIN3A FOS DEK ZNF263 REST SMARCB1 ZNF592 NFIL3 MAFF MYRF DKFZP434K028 DAGLA SYT7 FTH1 CYB561A3 VWCE SDHAF2 DDB1 LBHD1
GH11F061752 1.7 FANTOM5 Ensembl ENCODE 9.6 +1.6 1559 7.7 HDGF ATF1 SIN3A YBX1 DMAP1 ZNF48 YY1 ZNF121 GLIS2 ELK1 MYRF DKFZP434K028 TKFC INCENP
GH11F061731 1.2 Ensembl ENCODE 12.6 +24.7 24696 2.1 ATF1 PKNOX1 ARID4B SIN3A ZNF48 BRCA1 ZNF143 DEK MXD4 REST DAGLA MYRF DKFZP434K028 TMEM258 FEN1 MIR611 SYT7 PIR41833
GH11F061681 1 ENCODE 15.1 +75.0 74987 2.9 MLX ARID4B DMAP1 ZNF48 SLC30A9 FOS SP5 NFYC MXD4 MIER2 MYRF DKFZP434K028 DAGLA PIR41833
GH11F061594 1.4 Ensembl ENCODE 10.5 +162.0 162025 2.1 HDGF PKNOX1 ARNT CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF766 MYRF DKFZP434K028 SCGB1A1 LOC101927495 RPLP0P2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DKFZP434K028 on UCSC Golden Path with GeneCards custom track

Genomic Location for DKFZP434K028 Gene

Chromosome:
11
Start:
61,746,493 bp from pter
End:
61,757,664 bp from pter
Size:
11,172 bases
Orientation:
Minus strand

Genomic View for DKFZP434K028 Gene

Genes around DKFZP434K028 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DKFZP434K028 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DKFZP434K028 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DKFZP434K028 Gene

Proteins for DKFZP434K028 Gene

Post-translational modifications for DKFZP434K028 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DKFZP434K028 Gene

Domains & Families for DKFZP434K028 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DKFZP434K028 Gene

Function for DKFZP434K028 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DKFZP434K028 Gene

Localization for DKFZP434K028 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DKFZP434K028 Gene

Pathways & Interactions for DKFZP434K028 Gene

SuperPathways for DKFZP434K028 Gene

No Data Available

Interacting Proteins for DKFZP434K028 Gene

Gene Ontology (GO) - Biological Process for DKFZP434K028 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DKFZP434K028 Gene

Transcripts for DKFZP434K028 Gene

mRNA/cDNA for DKFZP434K028 Gene

(3) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DKFZP434K028 Gene

Uncharacterized LOC26070:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DKFZP434K028 Gene

No ASD Table

Relevant External Links for DKFZP434K028 Gene

GeneLoc Exon Structure for
DKFZP434K028

Expression for DKFZP434K028 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DKFZP434K028 Gene

mRNA differential expression in normal tissues according to GTEx for DKFZP434K028 Gene

This gene is overexpressed in Testis (x37.6).

Protein differential expression in normal tissues from HIPED for DKFZP434K028 Gene

This gene is overexpressed in Heart (69.0).

Integrated Proteomics: protein expression in normal tissues and cell lines from MOPED for DKFZP434K028 Gene



Protein tissue co-expression partners for DKFZP434K028 Gene

SOURCE GeneReport for Unigene cluster for DKFZP434K028 Gene:

Hs.564254
genes like me logo Genes that share expression patterns with DKFZP434K028: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for DKFZP434K028 Gene

Orthologs for DKFZP434K028 Gene

Evolution for DKFZP434K028 Gene

ENSEMBL:
Gene Tree for DKFZP434K028 (if available)
TreeFam:
Gene Tree for DKFZP434K028 (if available)

No data available for Orthologs for DKFZP434K028 Gene

Paralogs for DKFZP434K028 Gene

No data available for Paralogs for DKFZP434K028 Gene

Variants for DKFZP434K028 Gene

Sequence variations from dbSNP and Humsavar for DKFZP434K028 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type
rs10709102 -- 61,755,829(+) CAGGG(-/A)GCCTT intron-variant
rs111909318 -- 61,758,434(+) TCAGT(C/G)GGGCC intron-variant, upstream-variant-2KB
rs11230794 -- 61,759,023(+) ACCTG(A/G)CTGCA intron-variant, upstream-variant-2KB
rs112398600 -- 61,753,882(+) ACTGC(A/C)TCCCA intron-variant, downstream-variant-500B, upstream-variant-2KB
rs11297199 -- 61,758,093(+) AGTGA(-/G)GGGGG intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DKFZP434K028 Gene

Variant ID Type Subtype PubMed ID
nsv952459 CNV deletion 24416366
nsv832179 CNV loss 17160897
nsv528697 CNV loss 19592680

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for DKFZP434K028 Gene

Disorders for DKFZP434K028 Gene

Relevant External Links for DKFZP434K028

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DKFZP434K028

No disorders were found for DKFZP434K028 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DKFZP434K028 Gene

Publications for DKFZP434K028 Gene

  1. Protein interaction discovery using parallel analysis of translated ORFs (PLATO). (PMID: 23503679) Zhu J. … Elledge S.J. (Nat. Biotechnol. 2013) 3 64
  2. Protein array based interactome analysis of amyloid-I^ indicates an inhibition of protein translation. (PMID: 21244100) Virok D.P. … FA1lAPp L. (J. Proteome Res. 2011) 3 64
  3. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PMID: 21832049) OlA!h J. … OvA!di J. (J. Biol. Chem. 2011) 3 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DKFZP434K028 Gene

Sources for DKFZP434K028 Gene

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