DKC1 Gene
protein-coding GIFtS : 67
GCID: GC0X P153984
dyskeratosis congenita 1, dyskerin (Previous symbol: DKC )
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Aliasesfor DKC1 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Dyskeratosis Congenita 1, Dyskerin 1 2 SnoRNP Protein DKC12 3 NOLA41 2 3 Dyskerin3 DKC1 2 5 CBF52 NAP571 2 DKCX2 XAP1011 2 Cbf5p Homolog2 Nopp140-Associated Protein Of 57 KDa2 3 H/ACA Ribonucleoprotein Complex Subunit 42 Nucleolar Protein Family A Member 42 3 Dyskerin3 Nucleolar Protein NAP572 3 EC 5.4.99.-3 CBF5 Homolog2 3 EC 5.4.998
Export aliases for DKC1 gene to outside databases Previous GC identifers: GC0XP148054 GC0XP150371 GC0XP151576 GC0XP152458 GC0XP153554
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Summariesfor DKC1 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for DKC1 : This gene is a member of the H/ACA snoRNPs (small nucleolar ribonucleoproteins) gene family. snoRNPs are involved in various aspects of rRNA processing and modification and have been classified into two families: C/D and H/ACA. The H/ACA snoRNPs also include the NOLA1, 2 and 3 proteins. The protein encoded by this gene and the three NOLA proteins localize to the dense fibrillar components of nucleoli and to coiled (Cajal) bodies in the nucleus. Both 18S rRNA production and rRNA pseudouridylation are impaired if any one of the four proteins is depleted. These four H/ACA snoRNP proteins are also components of the telomerase complex. The protein encoded by this gene is related to the Saccharomyces cerevisiae Cbf5p and Drosophila melanogaster Nop60B proteins. The gene lies in a tail-to-tail orientation with the palmitoylated erythrocyte membrane protein gene and is transcribed in a telomere to centromere direction. Both nucleotide substitutions and single trinucleotide repeat polymorphisms have been found in this gene. Mutations in this gene cause X-linked dyskeratosis congenita, a disease resulting in reticulate skin pigmentation, mucosal leukoplakia, nail dystrophy, and progressive bone marrow failure in most cases. Mutations in this gene also cause Hoyeraal-Hreidarsson syndrome, which is a more severe form of dyskeratosis congenita. Two transcript variants encoding different isoforms have been found for this gene. (provided by RefSeq, Feb 2013) UniProtKB/Swiss-Prot: DKC1_HUMAN, O60832 Function : Isoform 1: Required for ribosome biogenesis and telomere maintenance. Probable catalytic subunit of H/ACAsmall nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Each rRNA can contain up to 100 pseudouridine ('psi') residues, which may serve to stabilize the conformation of rRNAs. Also required for correct processing or intranuclear trafficking of TERC, the RNA component of the telomerase reverse transcriptase (TERT) holoenzyme Function : Isoform 3: Promotes cell to cell and cell to substratum adhesion, increases the cell proliferation rate andleads to cytokeratin hyper-expression (when overexpressed in HeLa cells) Gene Wiki entry for DKC1 (Dyskerin)
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Genomic Viewsfor DKC1 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000023.10 NC_018934.1 NT_167198.1 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the DKC1 gene promoter: POU2F2 (Oct-2.1) Oct-B1 oct-B3 oct-B2 POU2F2 POU2F2C POU2F1 HSF2 POU2F1a POU2F2B Other transcription factors Search SABiosciences Chromatin IP Primers for DKC1 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat DKC1
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: Xq28 Ensembl cytogenetic band: Xq28 HGNC cytogenetic band: Xq28 DKC1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome X GeneLoc Exon Structure
GeneLoc location for GC0XP153984: view genomic region
(about GC identifiers )
Start:
153,991,031 bp from pter
End:
154,005,964 bp from pter
Size:
14,934 bases
Orientation:
plus strand
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Proteinsfor DKC1 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: DKC1_HUMAN, O60832 (See
protein sequence )Recommended Name: H/ACA ribonucleoprotein complex subunit 4 Size : 514 amino acids; 57674 Da
Subunit : Part of the H/ACA small nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which contains NHP2/NOLA2,GAR1/NOLA1, NOP10/NOLA3, and DKC1/NOLA4, which is presumed to be the catalytic subunit. The complex contains a stable core formed by binding of one or two NOP10-DKC1 heterodimers to NHP2; GAR1 subsequently binds to this core via DKC1. The complex binds a box H/ACA small nucleolar RNA (snoRNA), which may target the specific site of modification within the RNA substrate. During assembly, the complex contains NAF1 instead of GAR1/NOLA1. The complex also interacts with TERC, which contains a 3'-terminal domain related to the box H/ACA snoRNAs. Specific interactions with snoRNAs or TERC are mediated by GAR1 and NHP2. Associates with NOLC1/NOPP140. H/ACA snoRNPs interact with the SMN complex, consisting of SMN1 or SMN2, GEMIN2/SIP1, DDX20/GEMIN3, and GEMIN4. This is mediated by interaction between GAR1 and SMN1 or SMN2. The SMN complex may be required for correct assembly of the H/ACA snoRNP complex. Component of the telomerase holoenzyme complex at least composed of TERT, DKC1, WRAP53/TCAB1, NOP10, NHP2, GAR1, TEP1, EST1A, POT1 and a telomerase RNA template component (TERC). Interacts with SHQ1; this interaction may lead to the stabilization of DKC1, from the time of its synthesis until its association with NOP10, NHP2, and NAF1 at the nascent H/ACA RNA
Subcellular location : Isoform 1: Nucleus, nucleolus. Nucleus, Cajal body. Note=Also localized to Cajal bodies (coiledbodies)
Subcellular location : Isoform 3: Cytoplasm
Secondary accessions : F5BSB3 O43845 Q96G67 Q9Y505Alternative splicing : 2 isoforms : O60832-1 O60832-2 Explore the universe of human proteins at neXtProt for DKC1: NX_O60832 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_O60832 4/14 DME Specific Peptides for DKC1 (O60832 ) (see all 14 )DKC1 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001135935.1 NP_001354.1 ENSEMBL proteins: ENSP00000358563 ENSP00000400542 ENSP00000407325 ENSP00000395693 ENSP00000389304 ENSP00000407253 Reactome Protein details: O60832 Human Recombinant Protein Products: Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6 ): About this table
DKC1 for ontologies About GeneDecksing DKC1 Antibody Products: Assay Products for DKC1:
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Protein
Domains / Familiesfor DKC1 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
DKC1 for domains About GeneDecksing 5/7 InterPro domains/families (see all 7 ):
Graphical View of Domain Structure for InterPro Entry O60832 ProtoNet protein and cluster: O60832
2 Blocks protein families : IPB002501 Pseudouridylate synthase TruB IPB012960 DKCLD UniProtKB/Swiss-Prot: DKC1_HUMAN, O60832 Similarity : Belongs to the pseudouridine synthase TruB familySimilarity : Contains 1 PUA domain
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Functionfor DKC1 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: DKC1_HUMAN, O60832 Function : Isoform 1: Required for ribosome biogenesis and telomere maintenance. Probable catalytic subunit of H/ACAsmall nucleolar ribonucleoprotein (H/ACA snoRNP) complex, which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Each rRNA can contain up to 100 pseudouridine ('psi') residues, which may serve to stabilize the conformation of rRNAs. Also required for correct processing or intranuclear trafficking of TERC, the RNA component of the telomerase reverse transcriptase (TERT) holoenzyme Function : Isoform 3: Promotes cell to cell and cell to substratum adhesion, increases the cell proliferation rate andleads to cytokeratin hyper-expression (when overexpressed in HeLa cells) Catalytic activity : RNA uridine = RNA pseudouridine
Genatlas biochemistry entry for DKC1 : dyskerin,multifunctional protein,mainly expressed in the rapidly dividing cells of the epithelia and the hemopoietic system located in the nucleoli and the coiled bodies,possibly in pseudo-uridylation,involved in rRNA biosynthesis,ribosomal subunit assembly,and/or centromere/microtubule binding,ortholog of the rat NAP57 and yeast CBF5 Enzyme Numbers (IUBMB): EC 5.4.99 2 EC 5.4.99.- 1 Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DKC1 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DKC1 (see all 3 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): DKC1 (NM_001363 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DKC1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DKC1
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DKC1
Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view) : About this table
DKC1 for ontologies About GeneDecksing 3 GenomeRNAi human phenotypes for DKC1 :Animal Models: Mouse knock-outs for DKC1: Dkc1 tm2.1Bsl Dkc1 tm1Ppp Dkc1 tm1.1Bsl Dkc1 tm1.1Pjma 15 MGI mutant phenotypes (inferred from 9 alleles ) (MGI details for Dkc1) :
DKC1 for phenotypes About GeneDecksing
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Pathways & Interactionsfor DKC1 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Unified GeneCards pathways  - 5/7 super-pathways (see all 7 ) About this table See pathways by source Super-pathway contained gene-specific pathways 1 Meiotic Synapsis 2 Telomere Extension By Telomerase 3 Cell Cycle 4 Ribosome biogenesis in eukaryotes 5 Regulation of Telomerase
Pathway sources See GeneCards unified pathways Show all pathways 1 Downloadable PowerPoint Slide of QIAGEN Pathway Central Maps for DKC1 1 BioSystems Pathway for DKC1 5
Reactome Pathways for DKC1 1
Kegg Pathway (Kegg details for DKC1) :
DKC1 for pathways About GeneDecksing Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for DKC1 STRING Interaction
Network Preview (showing 5 interactants - click image to see 25)5/166 Interacting proteins for DKC1 (O60832 1 , 2 , 3 ENSP00000358563 4 ) via UniProtKB, MINT, STRING , and/or I2D (see all 166 )About this table Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6 ): About this table
DKC1 for ontologies About GeneDecksing
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Drugs & Compoundsfor DKC1 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section
DKC1 for compounds About GeneDecksing Browse Tocris compounds for DKC1 2 HMDB Compounds for DKC1 About this table 3 Novoseek chemical compound relationships for DKC1 gene About this table
Search CenterWatch for drugs/clinical trials and news about DKC1
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Transcriptsfor DKC1 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for DKC1 gene (2 alternative transcripts): NM_001142463.1 NM_001363.3 Unigene Cluster for DKC1:
Dyskeratosis congenita 1, dyskerin Hs.4747 [show with all ESTs ] Unigene Representative Sequence: NM_001363 12 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000369550 (uc004fmm.3 uc010nvf.3 ) ENST00000475423 ENST00000413910 ENST00000473552 ENST00000452771 ENST00000437719 ENST00000412124 ENST00000426673 ENST00000484317 ENST00000475966 ENST00000481062 ENST00000492372 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DKC1 (see all 4 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DKC1 (see all 3 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): DKC1 (NM_001363 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DKC1 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DKC1
Additional cDNA sequence: AF067008.1 AJ609449.1 AK225077.1 AK307672.1 BC009928.2 BC010015.2 JF279874.1 NR_002984.1 U59151.1
15 DOTS entries : DT.316838 DT.100656217
DT.99997122 DT.91776286 DT.95258819 DT.121317885 DT.100656222 DT.121317869 DT.95141781 DT.97860836 DT.92376532 DT.92413831 DT.95360933 DT.97779593 DT.100848559 24/460 AceView cDNA sequences (see all 460 ):
BE260992 BU730947 CR594173 BG169362 CB266071 BM789717 AI953143 CA425744 AA534951 BM982276 BX327599 T03313 CD367400 CB269112 AI344205 BC010015 BQ009951 AA664213 BQ775805 AF067008 BX391508 AA775911 BQ428360 AW169796 GeneLoc Exon Structure 5/6 Alternative Splicing Database (ASD) splice patterns (SP) for DKC1 (see all 6 ) About this scheme ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b · 2c ^ 3a · 3b ^ 4 ^ 5a · 5b ^ 6 ^ 7 ^ 8a · 8b · 8c ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13a · 13b ^ 14 ^ 15 SP1 :             -           -       -                         SP2 :             -           -                               SP3 :             -     -       -                               SP4 :             -                                         SP5 :                                                    
ECgene alternative splicing isoforms for DKC1
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Expression for DKC1 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section DKC1 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: --
About this image DKC1 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Ovary Primary Follicle Primary Oocyte Female Gametocytes, Germ Cells Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See DKC1 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for DKC1 SOURCE GeneReport for Unigene cluster: Hs.4747 UniProtKB/Swiss-Prot: DKC1_HUMAN, O60832 Tissue specificity : Ubiquitously expressed SABiosciences Expression via Pathway-Focused PCR Arrays including DKC1 : Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for DKC1Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat DKC1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat DKC1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat DKC1 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DKC1
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Orthologsfor DKC1 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the last universal common ancestor (LUCA).
Orthologs for DKC1 gene from 10/44 species (see all 44 ) About this table
Organism
Taxonomic classification
Gene
Description
Human Similarity
Orthology Type
Details
chicken (Gallus gallus)
Aves
DKC11
dyskeratosis congenita 1, dyskerin
75.82(n) 82.97(a)
 
422196 NM_001031115.1 NP_001026286.1
lizard (Anolis carolinensis)
Reptilia
DKC16 TRUB16
--
78(a) 19(a)
1 ↔ 1possible ortholog
GL343202.1(2096110-2107557) GL343206.1(3679435-3727762)
African clawed frog (Xenopus laevis)
Amphibia
Xl.214102
Xenopus laevis cDNA clone 5G23
77.18(n)
 
AJ009279.1
zebrafish (Danio rerio)
Actinopterygii
wufa28f102
Danio rerio, clone IMAGE5413486, mRNA, partial cds
76.33(n)
 
BC047840.1
fruit fly (Drosophila melanogaster)
Insecta
Nop60B1 , 3
rRNA processing pseudouridylate synthase3 Nucleolar protein at 60B1
73(a) 3 63.1(n) 1 67.34(a) 1
 
60C23 37873 1 NM_001169818.2 1 NP_001163289.1 1
worm (Caenorhabditis elegans)
Secernentea
K01G5.51 , 3
centromere/microtubule binding protein3 Protein K01G5.51
67(a) 3 62(n) 1 66.82(a) 1
 
III(10820090-10821576)3 176504 1 NM_066969.3 1 NP_499370.1 1
baker's yeast (Saccharomyces cerevisiae)
Saccharomycetes
CBF5(YLR175W)4 CBF51
Pseudouridine synthase catalytic subunit of box H/ACA more 4 Cbf5p1
60.37(n) 1 64.54(a) 1
 
12(506134-507585) 4 850872 1, 4 NP_013276.1 1, 4
thale cress (Arabidopsis thaliana)
eudicotyledons
NAP571
H/ACA ribonucleoprotein complex subunit 4
62.89(n) 64.74(a)
 
824882 NM_115574.2 NP_191274.1
rice (Oryza sativa)
Liliopsida
Os.134642
Oryza sativa (japonica cultivar-group) cDNA cloneJ more
73.32(n)
 
AK102460.1
E. coli (Escherichia coli)
Gamma proteobacteria
truB6
tRNA U55 pseudouridine synthase
20(a)
possible ortholog
Chromosome(3309855-3310799)
ENSEMBL Gene Tree for DKC1 (if available)TreeFam Gene Tree for DKC1 (if available)
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Paralogsfor DKC1 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
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Genomic Variantsfor DKC1 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr X pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for DKC1 (153991031 - 154005964 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for DKC1: -- Human Gene Mutation Database (HGMD) : DKC1 Locus Specific Mutation Databases (LSDB): DKC1 SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing DKC1
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Disorders
/ Diseasesfor DKC1 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database , Novoseek ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
DKC1 for disorders About GeneDecksing OMIM gene information: 300126 OMIM disorders : 305000 300240 UniProtKB/Swiss-Prot: DKC1_HUMAN, O60832
Defects in DKC1 are a cause of dyskeratosis congenita X-linked recessive (XDKC) [MIM:305000]. XDKC is a rare, progressive bone marrow failure syndrome characterized by the triad of reticulated skin hyperpigmentation, nail dystrophy, and mucosal leukoplakia. Early mortality is often associated with bone marrow failure, infections, fatal pulmonary complications, or malignancy Defects in DKC1 are the cause of Hoyeraal-Hreidarsson syndrome (HHS) [MIM:300240]. HHS is a multisystem disorder affecting males and is characterized by aplastic anemia, immunodeficiency, microcephaly, cerebellar hypoplasia, and growth retardation 20/32 diseases for DKC1 (see all 32 ): About MalaCards dyskeratosis congenita hoyeraal-hreidarsson syndrome dyskeratosis dyskeratosis congenita-1 dyskeratosis congenita autosomal dominant leukoplakia dyskeratosis congenita x-linked spinal muscular atrophy torch syndrome cerebellar hypoplasia severe combined immunodeficiency muscular atrophy fanconi's anemia pancytopenia combined immunodeficiency intrauterine infections aplastic anemia renal agenesis chronic lymphocytic leukemia lymphocytic leukemia 2 diseases from the University of Copenhagen DISEASES database for DKC1 :Dyskeratosis congenita pseudo-TORCH syndrome 10/13 Novoseek disease relationships for DKC1 gene (see all 13 ) About this table
Genatlas disease: DKC1 dyskeratosis congenita,X-linked recessive,characterized by early reticulate skin pigmentation,nail dystrophy,mucosal leukoplakia and progressive bone-marrow failure,including any form of Bloch Sulzberger incontinentia pigmenti and an increased susceptibility to a range of malignancies,including Hoyeraal-Hreidarsson syndrome,X-linked recessive,aplastic anemia,immunodeficiency,microcephaly,cerebellar hypoplasia and growth retardation Genetic Association Database (GAD): DKC1 Human Genome Epidemiology (HuGE) Navigator: DKC1 (2 documents) Export disorders for DKC1 gene to outside databases
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Publicationsfor DKC1 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for DKC1 gene, integrated from 9 sources (see all 179 ) (see top 10 ): (articles sorted by number of sources associating them with DKC1) Utopia : connect your pdf to the dynamic world of online information
Mapping and characterization of the X-linked dyskeratosis congenita (DKC) gene. (PubMed id 9888995) 1 , 2 , 3, 9 Hassock S.... Giannelli F. (1999) X-linked dyskeratosis congenita is caused by mutations in a highly conserved gene with putative nucleolar functions. (PubMed id 9590285) 1 , 2 , 3, 9 Heiss N.S.... Dokal I. (1998) Gene structure and expression of the mouse dyskeratosis congenita gene, dkc1. (PubMed id 10903840) 1 , 2 , 9 Heiss N.S....Poustka A. (2000) X-linked dyskeratosis congenita is predominantly caused by missense mutations in the DKC1 gene. (PubMed id 10364516) 1 , 2 , 9 Knight S.W.... Poustka A. (1999) Dyskerin localizes to the nucleolus and its mislocalization is unlikely to play a role in the pathogenesis of dyskeratosis congenita. (PubMed id 10556300) 1 , 2 , 9 Heiss N.S....Poustka A. (1999) Unexplained aplastic anaemia, immunodeficiency, and cerebellar hypoplasia (Hoyeraal-Hreidarsson syndrome) due to mutations in the dyskeratosis congenita gene, DKC1. (PubMed id 10583221) 1 , 2 , 9 Knight S.W....Dokal I. (1999) Identification of a novel mutation in DKC1 in dyskeratosis congenita. (PubMed id 18802941) 1 , 2 , 9 Kurnikova M....Shagin D. (2009) hNaf1 is required for accumulation of human box H/ACA snoRNPs, scaRNPs, and telomerase. (PubMed id 16601202) 1 , 2 , 9 Hoareau-Aveilla C....Henry Y. (2006) Stepwise RNP assembly at the site of H/ACA RNA transcription in human cells. (PubMed id 16618814) 1 , 2 , 9 Darzacq X.... Meier U.T. (2006) A telomerase component is defective in the human disease dyskeratosis congenita. (PubMed id 10591218) 1 , 2 , 9 Mitchell J.R.... Collins K. (1999) Novel mutations of the DKC1 gene in individuals affec ted with dyskeratosis congenita. (PubMed id 19879169) 1 , 2 , 9 Rostamiani K....Metzenberg A.B. (2010) Mutations in TERT, the gene for telomerase reverse transcriptase, in aplastic anemia. (PubMed id 15814878) 1 , 4, 9 Yamaguchi H.... Young N.S. (2005) A new human dyskerin isoform with cytoplasmic localiz ation. (PubMed id 21820037) 1 , 2 Angrisani A....Furia M. (2011) X-linked dyskeratosis congenita in Malaysia. (PubMed id 17417794) 1 , 2 Hamidah A....Kanegane H. (2008) A probability-based approach for high-throughput protein phosphorylation analysis and site localization. (PubMed id 16964243) 1 , 2 Beausoleil S.A.... Gygi S.P. (2006) Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983) 1 , 2 Olsen J.V....Mann M. (2006) Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins. (PubMed id 15044956) 1 , 2 Wang C. and Meier U.T. (2004) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Functional proteomic analysis of human nucleolus. (PubMed id 12429849) 1 , 2 Scherl A.... Diaz J.-J. (2002) A novel DKC1 mutation, severe combined immunodeficiency (T+B-NK-SCID) and bone marrow transplantation in an infant with Hoyeraal-Hreidarsson syndrome. (PubMed id 12437656) 1 , 2 Cossu F.... Dokal I. (2002) Human H/ACA small nucleolar RNPs and telomerase share evolutionarily conserved proteins NHP2 and NOP10. (PubMed id 11074001) 1 , 2 Pogacic V.... Filipowicz W. (2000) DKC1 overexpression associated with prostate cancer p rogression. (PubMed id 19755982) 1 , 9 Sieron P....Schulz W.A. (2009) Identification of novel DKC1 mutations in patients with dyskeratosis congenita: implications for pathophysiology and diagnosis. (PubMed id 11379875) 1 , 9 Knight S.W....Dokal I. (2001) Single-molecule analysis of the human telomerase RNA. dyskerin interaction and the effect of dyskeratosis congenita mutations. (PubMed id 19835419) 1 , 9 Ashbridge B....Balasubramanian S. (2009) Novel dyskerin-mediated mechanism of p53 inactivation through defective mRNA translation. (PubMed id 20501855) 1 , 9 Montanaro L....Derenzini M. (2010) Relationship between dyskerin expression and telomerase activity in human breast cancer. (PubMed id 18936525) 1 , 9 Montanaro L....Derenzini M. (2008) Pathogenic NAP57 mutations decrease ribonucleoprotein assembly in dyskeratosis congenita. (PubMed id 19734544) 1 , 9 Grozdanov P.N....Meier U.T. (2009) Identification of a novel mutation and a de novo mutation in DKC1 in two Chinese pedigrees with Dyskeratosis congenita. (PubMed id 15304085) 2 , 9 Ding Y.G....Wang B.X. (2004) Dyskeratosis congenita: molecular insights into telomerase function, ageing and cancer. (PubMed id 15613268) 1 , 9 Marrone A. and Dokal I. (2004) A dyskerin motif reactivates telomerase activity in X-linked dyskeratosis congenita and in telomerase-deficient human cells. (PubMed id 18057229) 1 , 9 Machado-Pinilla R....Perona R. (2008) Dyskeratosis congenita: a genetic disorder of many faces. (PubMed id 18005359) 1 , 9 Kirwan M. and Dokal I. (2008) Effects of dyskeratosis congenita mutations in dysker in, NHP2 and NOP10 on assembly of H/ACA pre-RNPs. (PubMed id 20008900) 1 , 9 Trahan C....Dragon F. (2010) The human TruB family of pseudouridine synthase genes, including the Dyskeratosis Congenita 1 gene and the novel member TRUB1. (PubMed id 12736709) 1 , 9 Zucchini C.... Valvassori L. (2003) Inactivation of the tumor suppressor genes causing th e hereditary syndromes predisposing to head and neck cancer via promoter hyperm ethylation in sporadic head and neck cancers. (PubMed id 20332657) 1 , 9 Smith I.M....Califano J.A. (2010) SHQ1 is required prior to NAF1 for assembly of H/ACA small nucleolar and telomerase RNPs. (PubMed id 19383767) 2 , 9 Grozdanov P.N....Meier U.T. (2009) Real-time PCR quantification of human DKC1 expression in colorectal cancer. (PubMed id 18607840) 1 , 9 Turano M....Furia M. (2008) An intronic mutation in DKC1 in an infant with Hoyeraal-Hreidarsson syndrome. (PubMed id 18627054) 1 , 9 Pearson T....Der Kaloustian V.M. (2008) Telomerase RNA level limits telomere maintenance in X-linked dyskeratosis congenita. (PubMed id 17015423) 1 , 9 Wong J.M. and Collins K. (2006) Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita. (PubMed id 16690864) 1 , 9 Yoon A....Ruggero D. (2006) Dyskeratosis congenita mutations in the H/ACA domain of human telomerase RNA affect its assembly into a pre-RNP. (PubMed id 19095616) 1 , 9 Trahan C. and Dragon F. (2009) A human telomerase holoenzyme protein required for Cajal body localization and telomere synthesis. (PubMed id 19179534) 2 , 9 Venteicher A.S.... Artandi S.E. (2009) Identification of ATPases pontin and reptin as telomerase components essential for holoenzyme assembly. (PubMed id 18358808) 1 , 9 Venteicher A.S....Artandi S.E. (2008) Protein composition of catalytically active human telomerase from immortal cells. (PubMed id 17395830) 1 , 9 Cohen S.B....Reddel R.R. (2007) Mutations of telomerase complex genes linked to bone marrow failures. (PubMed id 17625368) 1 , 9 Yamaguchi H. (2007) Regulation of telomerase by telomeric proteins. (PubMed id 15189140) 1 , 9 Smogorzewska A. and de Lange T. (2004) A census of human soluble protein complexes. (PubMed id 22939629) 1 Havugimana P.C....Emili A. (2012) Charting the landscape of tandem BRCT domain-mediated protein interactions. (PubMed id 22990118) 1 Woods N.T....Monteiro A.N. (2012) The accumulation and not the specific activity of telo merase ribonucleoprotein determines telomere maintenance deficiency in X-linked dyskeratosis congenita. (PubMed id 22058290) 1 Zeng X.L....Wong J.M. (2012) Initial characterization of the human central proteome. (PubMed id 21269460) 2 Burkard T.R.... Colinge J. (2011) Proliferating cell nuclear antigen (PCNA)-associated KIAA0101/PAF15 protein is a cell cycle-regulated anaphase-promoting complex/cyc losome substrate. (PubMed id 21628590) 1 Emanuele M.J....Elledge S.J. (2011) The H/ACA RNP assembly factor SHQ1 functions as an RN A mimic. (PubMed id 22085966) 1 Walbott H....Leulliot N. (2011) Correlation of dyskerin expression with active prolif eration independent of telomerase. (PubMed id 21674675) 1 Alawi F....Patel R. (2011) Ubiquitin ligase substrate identification through qua ntitative proteomics at both the protein and peptide levels. (PubMed id 21987572) 1 Lee K.A....Doedens J.R. (2011) Dyskeratosis congenita--two siblings with a new misse nse mutation in the DKC1 gene. (PubMed id 21736606) 1 Coelho J.D....Apetato M. (2011) Decreased dyskerin levels as a mechanism of telomere shortening in X-linked dyskeratosis congenita. (PubMed id 21415081) 1 Parry E.M....Armanios M. (2011) Dyskerin is required for tumor cell growth through me chanisms that are independent of its role in telomerase and only partially rela ted to its function in precursor rRNA processing. (PubMed id 21480387) 1 Alawi F. and Lin P. (2011) A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473) 1 Wagner S.A....Choudhary C. (2011) A directed protein interaction network for investigat ing intracellular signal transduction. (PubMed id 21900206) 1 Vinayagam A....Wanker E.E. (2011) Identification of proteins associated with ligand-acti vated estrogen receptor a in human breast cancer cell nuclei by tandem affinity purification and nano LC-MS/MS. (PubMed id 21182205) 1 Tarallo R....Weisz A. (2011) Systematic and quantitative assessment of the ubiquiti n-modified proteome. (PubMed id 21906983) 1 Kim W....Gygi S.P. (2011) A recurrent p. A353V mutation in DKC1 responsible for different phenotypes of dyskeratosis congenita in a Chinese family. (PubMed id 21601430) 1 Lai W....Dai S.h.X. (2011) Global identification of modular cullin-RING ligase su bstrates. (PubMed id 21963094) 1 Emanuele M.J....Elledge S.J. (2011) Mass spectrometric analysis of lysine ubiquitylation r eveals promiscuity at site level. (PubMed id 21139048) 1 Danielsen J.M....Nielsen M.L. (2011) rRNA pseudouridylation defects affect ribosomal ligan d binding and translational fidelity from yeast to human cells. (PubMed id 22099312) 1 Jack K....Dinman J.D. (2011) System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692) 2 Rigbolt K.T....Blagoev B. (2011) Systematic analysis of human protein complexes identi fies chromosome segregation proteins. (PubMed id 20360068) 1 Hutchins J.R....Peters J.M. (2010) Dynamics of cullin-RING ubiquitin ligase network revea led by systematic quantitative proteomics. (PubMed id 21145461) 1 Bennett E.J....Harper J.W. (2010) Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. (PubMed id 20068231) 2 Olsen J.V....Mann M. (2010) The protein network surrounding the human telomere re peat binding factors TRF1, TRF2, and POT1. (PubMed id 20811636) 1 Giannone R.J....Liu Y. (2010) Defining the human deubiquitinating enzyme interactio n landscape. (PubMed id 19615732) 1 Sowa M.E....Harper J.W. (2009) Large-scale proteomics analysis of the human kinome. (PubMed id 19369195) 2 Oppermann F.S.... Daub H. (2009) Quantitative phosphoproteomic analysis of T cell receptor signaling reveals system-wide modulation of protein-protein interactions. (PubMed id 19690332) 2 Mayya V.... Han D.K. (2009) Quantitative analysis of global ubiquitination in HeLa cells by mass spectrometry. (PubMed id 18781797) 1 Meierhofer D.... Kaiser P. (2008) Large-scale phosphoproteome analysis of human liver tissue by enrichment and fractionation of phosphopeptides with strong anion exchange chromatography. (PubMed id 18318008) 2 Han G.... Gu J. (2008) Toward a confocal subcellular atlas of the human proteome. (PubMed id 18029348) 1 Barbe L....Andersson-Svahn H. (2008) Kinase-selective enrichment enables quantitative phosphoproteomics of the kinome across the cell cycle. (PubMed id 18691976) 2 Daub H.... Mann M. (2008) A quantitative atlas of mitotic phosphorylation. (PubMed id 18669648) 2 Dephoure N.... Gygi S.P. (2008) DKC1 is a direct and conserved transcriptional target of c-MYC. (PubMed id 17822678) 1 Alawi F. and Lee M.N. (2007) Purification of human telomerase complexes identifies factors involved in telomerase biogenesis and telomere length regulation. (PubMed id 18082603) 1 Fu D. and Collins K. (2007) Toward a global characterization of the phosphoproteome in prostate cancer cells: identification of phosphoproteins in the LNCaP cell line. (PubMed id 17487921) 2 Giorgianni F.... Beranova-Giorgianni S. (2007) Functional specialization of beta-arrestin interactions revealed by proteomic analysis. (PubMed id 17620599) 1 Xiao K....Lefkowitz R.J. (2007) 14-3-3sigma controls mitotic translation to facilitate cytokinesis. (PubMed id 17361185) 1 Wilker E.W....Yaffe M.B. (2007) Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PubMed id 16344560) 1 Kimura K.... Sugano S. (2006) Phosphoproteome analysis of the human mitotic spindle. (PubMed id 16565220) 1 Nousiainen M.... Koerner R. (2006) The LIFEdb database in 2006. (PubMed id 16381901) 1 Mehrle A....Wiemann S. (2006) The DNA sequence of the human X chromosome. (PubMed id 15772651) 2 Ross M.T.... Bentley D.R. (2005) Nucleolar proteome dynamics. (PubMed id 15635413) 1 Andersen J.S....Mann M. (2005) Global phosphoproteome of HT-29 human colon adenocarcinoma cells. (PubMed id 16083285) 1 Kim J.-E.... White F.M. (2005) A human protein-protein interaction network: a resource for annotating the proteome. (PubMed id 16169070) 1 Stelzl U.... Wanker E.E. (2005) Rescue of an hTERT mutant defective in telomere elongation by fusion with hPot1. (PubMed id 15060173) 1 Armbruster B.N....Counter C.M. (2004) Large-scale characterization of HeLa cell nuclear phosphoproteins. (PubMed id 15302935) 1 Beausoleil S.A....Gygi S.P. (2004) From ORFeome to biology: a functional genomics pipeline. (PubMed id 15489336) 1 Wiemann S....Poustka A. (2004) Differential regulation of telomerase activity by six telomerase subunits. (PubMed id 12135483) 1 Chang J.T....Cheng A.J. (2002) Directed proteomic analysis of the human nucleolus. (PubMed id 11790298) 1 Andersen J.S.... Lamond A.I. (2002) Basal transcription activity of the dyskeratosis congenita gene is mediated by Sp1 and Sp3 and a patient mutation in a Sp1 binding site is associated with decreased promoter activity. (PubMed id 12137939) 1 Salowsky R....Poustka A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PubMed id 12477932) 1 Strausberg R.L....Marra M.A. (2002) Systematic subcellular localization of novel proteins identified by large-scale cDNA sequencing. (PubMed id 11256614) 1 Simpson J.C.... Wiemann S. (2000) Overlap of dyskeratosis congenita with the Hoyeraal-Hreidarsson syndrome. (PubMed id 10700698) 1 Yaghmai R....Metzenberg A. (2000) DNA cloning using in vitro site-specific recombination. (PubMed id 11076863) 1 Hartley J.L....Brasch M.A. (2000) Dyskeratosis congenita caused by a 3' deletion: germline and somatic mosaicism in a female carrier. (PubMed id 10438713) 1 Vulliamy T.J....Mason P.J. (1999) Dyskeratosis congenita: new clinical and molecular insights into ribosome function. (PubMed id 10217077) 1 McGrath J.A. (1999) Skewed X-chromosome inactivation in female carriers of dyskeratosis congenita. (PubMed id 9042917) 1 Devriendt K....Fryns J.P. (1997) Normalization and subtraction: two approaches to facilitate gene discovery. (PubMed id 8889548) 1 Bonaldo M.F.... Soares M.B. (1996) The Hoyeraal-Hreidarsson syndrome: the fourth case of a separate entity with prenatal growth retardation, progressive pancytopenia and cerebellar hypoplasia. (PubMed id 7607282) 1 Aalfs C.M....Hennekam R.C. (1995) Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides. (PubMed id 8125298) 1 Maruyama K. and Sugano S. (1994) Dyskeratosis Congenita (PubMed id 20301779) 1 Savage S.A. (1993) Dyskerin expression influences the level of ribosomal RNA pseudo-uridylation and telomerase RNA component in human breast cancer. (PubMed id 16841302) 9 Montanaro L....Derenzini M. (2006) Dyskerin is a component of the Arabidopsis telomerase RNP required for telomere maintenance. (PubMed id 18212040) 9 Kannan K....Shippen D.E. (2008) Mouse dyskerin mutations affect accumulation of telomerase RNA and small nucleolar RNA, telomerase activity, and ribosomal RNA processing. (PubMed id 15240872) 9 Mochizuki Y....Mason P.J. (2004) Dyskerin, telomerase and the DNA damage response. (PubMed id 19106610) 9 Gu B....Mason P.J. (2009) Analysis of epitope-tagged forms of the dyskeratosis congenital protein (dyskerin): identification of a nuclear localization signal. (PubMed id 10744426) 9 Youssoufian H....Qatanani M. (1999) Anomalous electrophoretic migration of newly synthesi zed ribosomal RNAs and their precursors from cells with DKC1 mutations. (PubMed id 19729012) 9 Gu B.W....Mason P.J. (2009) Mutations in the telomerase component NHP2 cause the premature ageing syndrome dyskeratosis congenita. (PubMed id 18523010) 9 Vulliamy T....Dokal I. (2008) Dyskeratosis congenita: advances in the understanding of the telomerase defect and the role of stem cell transplantation. (PubMed id 17663679) 9 de la Fuente J. and Dokal I. (2007) DKC1 gene mutation in a Taiwanese kindred with X-linked dyskeratosis congenita. (PubMed id 12513020) 9 Lin J.H....Chao S.C. (2002) Identification of DKC1 gene mutations in Japanese patients with X-linked dyskeratosis congenita. (PubMed id 15842668) 9 Kanegane H....Miyawaki T. (2005) A novel missense mutation in the DKC1 gene in a Japanese family with X-linked dyskeratosis congenita. (PubMed id 12186364) 9 Hiramatsu H....Okuno T. (2002) One novel and two recurrent missense DKC1 mutations in patients with dyskeratosis congenita (DKC). (PubMed id 11491307) 9 Heiss N.S....Poustka A. (2001) Identification of DKC1 gene mutation in an Indian pat ient. (PubMed id 20091372) 9 Tamhankar P.M....Phadke S.R. (2010) Atypical X-chromosome inactivation in an X;1 translocation patient demonstrating Xq28 functional disomy. (PubMed id 19215059) 9 Cottrell C.E....Gastier-Foster J.M. (2009) [Clinical and genetic characteristics of a patient wi th dyskeratosis congenita] (PubMed id 20079002) 9 Li J.G....Wang T.Y. (2009) [Dyskeratosis congenita, a disease caused by defective telomere maintenance] (PubMed id 18405638) 9 Hoareau-Aveilla C....Leblanc T. (2008) Dynamic association and localization of human H/ACA RNP proteins. (PubMed id 17135485) 9 Kittur N....Meier U.T. (2006) Telomerase RNA mutated in autosomal dyskeratosis congenita reconstitutes a weakly active telomerase enzyme defective in telomere elongation. (PubMed id 15753647) 9 Cerone M.A....Autexier C. (2005) Dyskeratosis congenita. (PubMed id 12737310) 9 Marrone A. and Mason P.J. (2003) Dyskeratosis congenita: its link to telomerase and aplastic anaemia. (PubMed id 14556776) 9 Dokal I. and Vulliamy T. (2003) The RNA component of telomerase is mutated in autosomal dominant dyskeratosis congenita. (PubMed id 11574891) 9 Vulliamy T....Dokal I. (2001) [Genetic analysis of a patient with dyskeratosis congenita] (PubMed id 10921354) 9 Yoshimoto T....Nunoi H. (2000) Specificity and stoichiometry of subunit interactions in the human telomerase holoenzyme assembled in vivo. (PubMed id 20351177) 9 Egan E.D. and Collins K. (2010) Deregulation of oncogene-induced senescence and p53 t ranslational control in X-linked dyskeratosis congenita. (PubMed id 20453831) 9 Bellodi C....Ruggero D. (2010) Dyskeratosis congenita, stem cells and telomeres. (PubMed id 19419704) 9 Kirwan M. and Dokal I. (2009) Exogenous TERC alone can enhance proliferative potential, telomerase activity and telomere length in lymphocytes from dyskeratosis congenita patients. (PubMed id 19036115) 9 Kirwan M....Dokal I. (2009) An atypical form of dyskeratosis congenita with renal agenesis and no mutation in DKC1, TERC and TERT genes. (PubMed id 19415813) 9 Balci S....Vulliamy T. (2009) Changes in the expression of telomere maintenance genes suggest global telomere dysfunction in B-chronic lymphocytic leukemia. (PubMed id 18077792) 9 Poncet D....Gilson E. (2008) TINF2, a component of the shelterin telomere protection complex, is mutated in dyskeratosis congenita. (PubMed id 18252230) 9 Savage S.A....Alter B.P. (2008) [Abnormality of telomere maintenance linked to bone marrow failures] (PubMed id 18326318) 9 Yamaguchi H. (2008) Genetic heterogeneity in autosomal recessive dyskeratosis congenita with one subtype due to mutations in the telomerase-associated protein NOP10. (PubMed id 17507419) 9 Walne A.J....Dokal I. (2007) Telomerase reverse-transcriptase homozygous mutations in autosomal recessive dyskeratosis congenita and Hoyeraal-Hreidarsson syndrome. (PubMed id 17785587) 9 Marrone A....Dokal I. (2007) Crystal structure of a Cbf5-Nop10-Gar1 complex and implications in RNA-guided pseudouridylation and dyskeratosis congenita. (PubMed id 16427014) 9 Rashid R....Li H. (2006) Dyskeratosis congenita. (PubMed id 16140563) 9 Handley T.P....Ogden G.R. (2006) Dyskeratosis congenita: telomerase, telomeres and anticipation. (PubMed id 15917199) 9 Marrone A....Dokal I. (2005) Dyskeratosis congenita -- a disease of dysfunctional telomere maintenance. (PubMed id 15974869) 9 Mason P.J....Bessler M. (2005) Dyskeratosis congenita: a disorder of defective telomere maintenance? (PubMed id 16207588) 9 Walne A.J....Dokal I. (2005) Telomerase dysfunction and dyskeratosis congenita. (PubMed id 19003239) 9 Walne A.J. and Dokal I. (2004) Dyskeratosis congenita and telomerase. (PubMed id 14758110) 9 Bessler M....Mason P.J. (2004) Enhanced telomere shortening in transformed lymphoblasts from patients with X linked dyskeratosis. (PubMed id 12890806) 9 Montanaro L....Derenzini M. (2003) Missense mutation in a patient with X-linked dyskeratosis congenita. (PubMed id 12681984) 9 Kraemer D.M. and Goebeler M. (2003) Increased mortality rate and not impaired ribosomal biogenesis is responsible for proliferative defect in dyskeratosis congenita cell lines. (PubMed id 11851894) 9 Montanaro L....Derenzini M. (2002) Immunopurified small nucleolar ribonucleoprotein particles pseudouridylate rRNA independently of their association with phosphorylated Nopp140. (PubMed id 12446766) 9 Wang C....Meier U.T. (2002) Very short telomeres in the peripheral blood of patients with X-linked and autosomal dyskeratosis congenita. (PubMed id 11259155) 9 Vulliamy T.J....Dokal I. (2001) Stable expression in yeast of the mature form of human telomerase RNA depends on its association with the box H/ACA small nucleolar RNP proteins Cbf5p, Nhp2p and Nop10p. (PubMed id 11160879) 9 Dez C....Henry Y. (2001) X-linked dyskeratosis congenita: restrictive pulmonary disease and a novel mutation. (PubMed id 11641517) 9 Safa W.F....Frossard P.M. (2001) Mutation analysis of the DKC1 gene in incontinentia p igmenti. (PubMed id 10636732) 9 Heiss N.S....Kenwrick S. (1999) Mutant dyskerin ends relationship with telomerase. (PubMed id 10636790) 9 Shay J.W. and Wright W.E. (1999) Dyskeratosis Congenita (DC) Registry: identification of new features of DC. (PubMed id 9886310) 9 Knight S....Dokal I. (1998) Expression profile of significant immortalization gen es in colon cancer. (PubMed id 20127035) 9 Witkowska A....Mazurek U. (2010) [Molecular diagnosis and therapeutic measures in pati ents with dyskeratosis congenita] (PubMed id 20153999) 9 Reiger Z....Erdos M. (2010) Dyskeratosis congenita: a case report. (PubMed id 19615640) 9 Abdel-Karim A....Yeoman C.M. (2009) Human miRNA precursors with box H/ACA snoRNA features . (PubMed id 19763159) 9 Scott M.S....Barton G.J. (2009) Telomerase deficiency and cancer susceptibility syndr omes. (PubMed id 19917533) 9 Perona R....Carrillo J. (2009) Variable expression of Dkc1 mutations in mice. (PubMed id 19391112) 9 He J....Mason P.J. (2009) The loss of the snoRNP chaperone Nopp140 from Cajal bodies of patient fibroblasts correlates with the severity of spinal muscular atrophy. (PubMed id 19129172) 9 RenvoisAc B....Lefebvre S. (2009) Advances in the understanding of dyskeratosis congeni ta. (PubMed id 19208095) 9 Walne A.J. and Dokal I. (2009) NOLA1 gene mutations in acquired aplastic anemia. (PubMed id 18989882) 9 Pigullo S....Dufour C. (2008) TINF2 mutations result in very short telomeres: analysis of a large cohort of patients with dyskeratosis congenita and related bone marrow failure syndromes. (PubMed id 18669893) 9 Walne A.J....Dokal I. (2008) Telomere maintenance and human bone marrow failure. (PubMed id 18239083) 9 Calado R.T. and Young N.S. (2008) Dyskeratosis congenita: the diverse clinical presenta tion of mutations in the telomerase complex. (PubMed id 17825470) 9 Vulliamy T.J. and Dokal I. (2008) Telomerase subunits expression variation between biopsy samples and cell lines derived from malignant glioma. (PubMed id 17196947) 9 Shervington A....Shervington L. (2007) Very short telomere length by flow fluorescence in situ hybridization identifies patients with dyskeratosis congenita. (PubMed id 17468339) 9 Alter B.P....Lansdorp P.M. (2007) Biogenesis and intranuclear trafficking of human box C/D and H/ACA RNPs. (PubMed id 17381323) 9 Kiss T....Weber M. (2006) Advances in understanding the genetic basis for bone-marrow failure. (PubMed id 16470156) 9 Lieberman L. and Dror Y. (2006) [Dyskeratosis congenita in a 40-year-old patient] (PubMed id 15789197) 9 Benoit S....Goebeler M. (2006) Mutations in dyskeratosis congenita: their impact on telomere length and the diversity of clinical presentation. (PubMed id 16332973) 9 Vulliamy T.J....Dokal I. (2006) The many facets of H/ACA ribonucleoproteins. (PubMed id 15770508) 9 Meier U.T. (2005) Gene expression dose-response changes in microarrays after exposure of human peripheral lung epithelial cells to nickel(II). (PubMed id 12915101) 9 Cheng R.Y....Kasprzak K.S. (2003) Two brothers with findings resembling congenital intrauterine infection-like syndrome (pseudo-TORCH syndrome). (PubMed id 12833411) 9 Knoblauch H....Tinschert S. (2003) Further delineation of the congenital form of X-linked dyskeratosis congenita (Hoyeraal-Hreidarsson syndrome). (PubMed id 14648217) 9 Sznajer Y....Verloes A. (2003) Cloning and characterization of Arabidopsis thaliana AtNAP57--a homologue of yeast pseudouridine synthase Cbf5p. (PubMed id 11833778) 9 Maceluch J....Jarmol/owski A. (2001)
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PharmGKB entry for DKC1 Pharmacogenomics, SNPs, Pathways ATLAS Chromosomes in Cancer entry for DKC1 Genetics and Cytogenetics in Oncology and Haematology DKC1base http://bioinf.uta.fi/DKC1base/ GeneReviews http://www.ncbi.nlm.nih.gov/sites/GeneTests/lab/gene/DKC1
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About This Section Patent Information for DKC1 gene: Search GeneIP for patents involving DKC1 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Productsfor DKC1 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
OriGene Antibodies for DKC1 OriGene shRNA RFP for DKC1 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for DKC1 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for DKC1 OriGene Protein Over-expression Lysate for DKC1 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for DKC1 OriGene 3'-UTR Clone for DKC1 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for DKC1 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for DKC1 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for DKC1 OriGene Custom Protein Services for DKC1 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat DKC1 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing DKC1 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat DKC1 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat DKC1 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat DKC1 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat DKC1
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DKC1 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DKC1
ThermoFisher Antibody for DKC1
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat DKC1
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