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Aliases for DISC1-IT1 Gene

Subcategory (RNA class) for DISC1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DISC1-IT1 Gene

  • DISC1 Intronic Transcript 1 2 3 5
  • DISC1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for DISC1-IT1 Gene

Previous GeneCards Identifiers for DISC1-IT1 Gene

  • GC00U933379
  • GC01P232062

Summaries for DISC1-IT1 Gene

GeneCards Summary for DISC1-IT1 Gene

DISC1-IT1 (DISC1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DISC1-IT1 Gene

Genomics for DISC1-IT1 Gene

Regulatory Elements for DISC1-IT1 Gene

Enhancers for DISC1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01F231929 1 Ensembl ENCODE 0.8 +4.7 4719 2.8 CTCF CBX3 ZNF280D FEZF1 ZIC2 RAD21 CBX1 POLR2A CBX5 SMARCA4 DISC1-IT1 LOC105373172
GH01F231922 0.8 Ensembl ENCODE 0.8 -2.3 -2332 2.3 ZFHX2 POLR2A SMARCA4 MAFK EGR2 DISC1-IT1 GC01M231917
GH01F231933 1.1 Ensembl ENCODE 0.4 +8.8 8783 1.9 SOX13 HDAC1 TAL1 FEZF1 BCL11B ZBTB48 NCOR1 NFE2 ZNF584 HES1 FAM89A DISC1-IT1 LOC105373172
GH01F231937 1.1 FANTOM5 Ensembl ENCODE 0.4 +11.8 11769 1.1 ZFHX2 PKNOX1 NFIA ELK1 HLF SCRT2 RAD21 DISC1-IT1 LOC105373172
GH01F231917 0.8 Ensembl ENCODE 0.4 -6.7 -6658 3.3 ZNF263 ZNF664 SMARCA4 ZNF133 ETV6 TRIM28 GC01M231917 DISC1-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DISC1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DISC1-IT1 Gene

Chromosome:
1
Start:
231,925,834 bp from pter
End:
231,945,233 bp from pter
Size:
19,400 bases
Orientation:
Plus strand

Genomic View for DISC1-IT1 Gene

Genes around DISC1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DISC1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DISC1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DISC1-IT1 Gene

Proteins for DISC1-IT1 Gene

Post-translational modifications for DISC1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DISC1-IT1 Gene

Domains & Families for DISC1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DISC1-IT1 Gene

Function for DISC1-IT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DISC1-IT1 Gene

Localization for DISC1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DISC1-IT1 Gene

Pathways & Interactions for DISC1-IT1 Gene

SuperPathways for DISC1-IT1 Gene

No Data Available

Interacting Proteins for DISC1-IT1 Gene

Gene Ontology (GO) - Biological Process for DISC1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DISC1-IT1 Gene

Transcripts for DISC1-IT1 Gene

mRNA/cDNA for DISC1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DISC1-IT1 Gene

No ASD Table

Relevant External Links for DISC1-IT1 Gene

GeneLoc Exon Structure for
DISC1-IT1
ECgene alternative splicing isoforms for
DISC1-IT1

Expression for DISC1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DISC1-IT1 Gene

genes like me logo Genes that share expression patterns with DISC1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DISC1-IT1 Gene

Orthologs for DISC1-IT1 Gene

Evolution for DISC1-IT1 Gene

ENSEMBL:
Gene Tree for DISC1-IT1 (if available)
TreeFam:
Gene Tree for DISC1-IT1 (if available)

No data available for Orthologs for DISC1-IT1 Gene

Paralogs for DISC1-IT1 Gene

No data available for Paralogs for DISC1-IT1 Gene

Variants for DISC1-IT1 Gene

Sequence variations from dbSNP and Humsavar for DISC1-IT1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs10652394 -- 231,931,645(+) TGTGA(-/T/TT/TTT/TTTT)TTTTT intron-variant
rs11122376 -- 231,930,348(+) TCACC(C/G)Taaca intron-variant
rs111343941 -- 231,939,614(+) CTTAC(A/G)TGCTA intron-variant
rs111437944 -- 231,932,309(+) CTGAT(A/C/G)TAGTT intron-variant
rs112646602 -- 231,940,760(+) TTCAC(A/T)TTAGC intron-variant

Relevant External Links for DISC1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DISC1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DISC1-IT1 Gene

Disorders for DISC1-IT1 Gene

Relevant External Links for DISC1-IT1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DISC1-IT1

No disorders were found for DISC1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DISC1-IT1 Gene

Publications for DISC1-IT1 Gene

No publications were found for DISC1-IT1 Gene.

Products for DISC1-IT1 Gene

Sources for DISC1-IT1 Gene

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