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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

DIS3 Gene

protein-coding   GIFtS: 62
GCID: GC13M073329

DIS3 mitotic control homolog (S. cerevisiae)

(Previous name: KIAA1008 )
(Previous symbol: KIAA1008)
 Explore 5 diseases affiliated with
DIS3 via our new
 Human Malady Compendium 
Biological research products
for DIS3
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
DIS3 Mitotic Control Homolog (S. Cerevisiae)1 2     RP11-342J4.32
KIAA10081 2 3 5     BA555G22.11
RRP441 2 3     Exosome Complex Exonuclease RRP442
EXOSC111 2     Exosome Component 112
Dis3p1     Mitotic Control Protein Dis3 Homolog2
Protein DIS3 Homolog2 3     EC 3.1.13.-3
Ribosomal RNA-Processing Protein 442 3     EC 3.1.26.-3
2810028N01Rik2     EC 3.1.138

External Ids:    HGNC: 206041   Entrez Gene: 228942   Ensembl: ENSG000000835207   OMIM: 6075335   UniProtKB: Q9Y2L13   

Export aliases for DIS3 gene to outside databases

Previous GC identifers: GC13M071296 GC13M067324 GC13M072266 GC13M071127 GC13M054026


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

UniProtKB/Swiss-Prot: RRP44_HUMAN, Q9Y2L1
Function: Putative catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and
participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex
is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA
processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream
transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the
cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic
hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA
exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing
AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation
of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. DIS3 has both 3'-5' exonuclease and
endonuclease activities

Gene Wiki entry for DIS3


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000013.10  NC_018924.1  NT_024524.14  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the DIS3 gene promoter:
         AhR   Pax-5   GATA-3   p53   Brachyury   C/EBPalpha   Arnt   GATA-2   N-Myc   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidDIS3 promoter sequence
   Search SABiosciences Chromatin IP Primers for DIS3

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DIS3


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 13q22.1   Ensembl cytogenetic band:  13q22.1   HGNC cytogenetic band: 13q21.32

DIS3 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
DIS3 gene location

GeneLoc information about chromosome 13         GeneLoc Exon Structure

GeneLoc location for GC13M073329:  view genomic region     (about GC identifiers)

Start:
73,329,540 bp from pter      End:
73,356,344 bp from pter
Size:
26,805 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: RRP44_HUMAN, Q9Y2L1 (See protein sequence)
Recommended Name: Exosome complex exonuclease RRP44  
Size: 958 amino acids; 109003 Da
Cofactor: Magnesium and manganese
Subunit: Component of the RNA exosome complex. The catalytically inactive RNA exosome core (Exo-9) complex is believed
to associate with catalytic subunits EXOSC10, and DIS3 or DIS3L in cytoplasmic- and nuclear-specific RNA exosome
complex forms
Subcellular location: Cytoplasm. Nucleus, nucleolus. Nucleus, nucleoplasm. Nucleus. Note=Predominantly located in the
nucleus. According to PubMed:12429849, found in the nucleolus and according to PubMed:20531386, excluded from
nucleolus supporting the existence of a nucleolar RNA exosome complex devoid of DIS3
Miscellaneous: The association of DIS3 with the RNA exosome complex appears to be weak explaining its absence in some
complex purifications
Sequence caution: Sequence=BAA76852.2; Type=Erroneous initiation; Note=Translation N-terminally shortened;
Secondary accessions: A6NI21 B2RBL2 Q5W0P7 Q5W0P8 Q658Z7 Q7Z481 Q8WWI2 Q9UG36
Alternative splicing: 2 isoforms:  Q9Y2L1-1   Q9Y2L1-2   

Explore the universe of human proteins at neXtProt for DIS3: NX_Q9Y2L1

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9Y2L1

  • 4/8 DME Specific Peptides for DIS3 (Q9Y2L1) (see all 8)
     VREHYLR  GVHIADV  FHHYGLA  NKEKAIE 

    DIS3 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001121698.1  NP_055768.3  

    ENSEMBL proteins: 
     ENSP00000366997   ENSP00000367011   ENSP00000436350   ENSP00000440058  
    Reactome Protein details: Q9Y2L1
    Human Recombinant Protein Products: 
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    OriGene Purified Protein: DIS3
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    Novus Biologicals DIS3 Protein
    Novus Biologicals DIS3 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for DIS3

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000176nuclear exosome (RNase complex) IDA--
    GO:0000178exosome (RNase complex) TAS9562621
    GO:0005654nucleoplasm IDA--
    GO:0005730NOT nucleolus IDA--
    GO:0005829cytosol TAS--


    DIS3 for ontologies           About GeneDecksing



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    ThermoFisher Antibodies for DIS3

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    Uscn ELISAs and CLIAs for DIS3


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    DIS3 for domains           About GeneDecksing

    3 InterPro domains/families:
     IPR006596 PINc_nuc-bd
     IPR022966 RNase_II/R_CS
     IPR001900 RNase_II/R

    Graphical View of Domain Structure for InterPro Entry Q9Y2L1

    ProtoNet protein and cluster: Q9Y2L1

    2 Blocks protein families:
    IPB001900 Ribonuclease II
    IPB006596 Nucleotide binding protein


    UniProtKB/Swiss-Prot: RRP44_HUMAN, Q9Y2L1
    Similarity: Belongs to the RNR ribonuclease family
    Similarity: Contains 1 PINc domain


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: RRP44_HUMAN, Q9Y2L1
    Function: Putative catalytic component of the RNA exosome complex which has 3'->5' exoribonuclease activity and
    participates in a multitude of cellular RNA processing and degradation events. In the nucleus, the RNA exosome complex
    is involved in proper maturation of stable RNA species such as rRNA, snRNA and snoRNA, in the elimination of RNA
    processing by-products and non-coding 'pervasive' transcripts, such as antisense RNA species and promoter-upstream
    transcripts (PROMPTs), and of mRNAs with processing defects, thereby limiting or excluding their export to the
    cytoplasm. The RNA exosome may be involved in Ig class switch recombination (CSR) and/or Ig variable region somatic
    hypermutation (SHM) by targeting AICDA deamination activity to transcribed dsDNA substrates. In the cytoplasm, the RNA
    exosome complex is involved in general mRNA turnover and specifically degrades inherently unstable mRNAs containing
    AU-rich elements (AREs) within their 3' untranslated regions, and in RNA surveillance pathways, preventing translation
    of aberrant mRNAs. It seems to be involved in degradation of histone mRNA. DIS3 has both 3'-5' exonuclease and
    endonuclease activities

    Enzyme Numbers (IUBMB): EC 3.1.13.-1 EC 3.1.132 EC 3.1.26.-1

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat DIS3
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    hsa-miR-548j hsa-miR-136 hsa-miR-4272 hsa-miR-200a hsa-miR-374a* hsa-miR-141 hsa-miR-548a-5p hsa-miR-548d-5p
    SwitchGear 3'UTR luciferase reporter plasmidDIS3 3' UTR sequence
    Inhib. RNA
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    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DIS3 (see all 7)
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    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DIS3

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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DIS3

    Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:00001753'-5'-exoribonuclease activity IMP--
    GO:0003723RNA binding IEA--
    GO:0004519endonuclease activity IMP--
    GO:0004540ribonuclease activity ----
    GO:0005085guanyl-nucleotide exchange factor activity IDA9562621


    DIS3 for ontologies           About GeneDecksing


    1 GenomeRNAi human phenotype for DIS3:
     Synthetic lethal with Ras 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/6 super-pathways (see all 6About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Destabilization of mRNA by Tristetraprolin (TTP)
    Destabilization of mRNA by Tristetraprolin (TTP)1.00
    mRNA Decay by 3' to 5' Exoribonuclease0.56
    Destabilization of mRNA by Butyrate Response Factor 1 (BRF1)0.79
    Destabilization of mRNA by KSRP0.48
    2Deadenylation-dependent mRNA decay
    Deadenylation-dependent mRNA decay1.00
    RNA degradation0.50
    3Metabolism of mRNA
    Metabolism of mRNA1.00
    Metabolism of RNA0.92
    4ATP/ITP metabolism
    ATP/ITP metabolism1.00
    ATP/ITP metabolism0.98
    5Ubiquitinated Orc1 is degraded by the proteasome
    Regulation of mRNA Stability by Proteins that Bind AU-rich Elements0.55

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    1 EMD Millipore Pathway for DIS3
        ATP/ITP metabolism


    1 GeneGo (Thomson Reuters) Pathway for DIS3
        ATP/ITP metabolism

    5/9        Reactome Pathways for DIS3 (see all 9)
        Regulation of mRNA Stability by Proteins that Bind AU-rich Elements
    Destabilization of mRNA by Butyrate Response Factor 1 (BRF1)
    Destabilization of mRNA by KSRP
    mRNA Decay by 3' to 5' Exoribonuclease
    Deadenylation-dependent mRNA decay


    1         Kegg Pathway  (Kegg details for DIS3):
        RNA degradation


    DIS3 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for DIS3

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/125 Interacting proteins for DIS3 (Q9Y2L11, 2, 3 ENSP000003669974) via UniProtKB, MINT, STRING, and/or I2D (see all 125)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=1 
    HIST1H4BP628053I2D: score=1 
    HIST1H4CP628053I2D: score=1 
    HIST1H4DP628053I2D: score=1 
    HIST1H4EP628053I2D: score=1 
    About this table

    Gene Ontology (GO): 5/8 biological process terms (GO ID links to tree view) (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000288nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay TAS--
    GO:0006364rRNA processing TAS9562621
    GO:0010467gene expression TAS--
    GO:0016070RNA metabolic process TAS--
    GO:0016071mRNA metabolic process TAS--


    DIS3 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section
    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for DIS3
    Search CenterWatch for drugs/clinical trials and news about DIS3 / RRP44 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for DIS3 gene (2 alternative transcripts): 
    NM_001128226.1  NM_014953.3  

    Unigene Cluster for DIS3:

    DIS3 mitotic control homolog (S. cerevisiae)
    Hs.744104  [show with all ESTs]
    Unigene Representative Sequence: NM_014953
    6 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000377767(uc001viy.4 uc001vix.4) ENST00000377780 ENST00000469339
    ENST00000490646 ENST00000475871 ENST00000545453(uc001viz.3)

    miRNA
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    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat DIS3
    8/45 QIAGEN miScript miRNA Assays for microRNAs that regulate DIS3 (see all 45):
    hsa-miR-548j hsa-miR-136 hsa-miR-4272 hsa-miR-200a hsa-miR-374a* hsa-miR-141 hsa-miR-548a-5p hsa-miR-548d-5p
    SwitchGear 3'UTR luciferase reporter plasmidDIS3 3' UTR sequence
    Inhib. RNA
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      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DIS3

    Additional cDNA sequence: 

    AB001743.1 AB023225.1 AF035310.1 AF330044.1 AK001346.1 AK025634.1 AK314715.1 AL080158.1 
    AL832266.1 BC012468.1 BC038101.1 BC056143.1 U79246.1 

    14 DOTS entries:

    DT.112004  DT.95123236  DT.112184  DT.91711187  DT.99938385  DT.120765121  DT.100776569  DT.444967 
    DT.120765176  DT.95233450  DT.120765017  DT.75139840  DT.100793167  DT.101975445 

    24/161 AceView cDNA sequences (see all 161):

    BQ228050 AL080158 AA258547 BQ932056 AA213647 AV728241 BU430346 BC056143 
    D20392 AA741205 BM453322 AW239246 U79246 BM972526 AA262938 BM760919 
    AA236385 BC012468 R15846 BP370472 AA807584 AI242310 BM463271 AW043622 

    GeneLoc Exon Structure

    5/6 Alternative Splicing Database (ASD) splice patterns (SP) for DIS3 (see all 6)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9a · 9b ^ 10a · 10b ^ 11 ^ 12a · 12b ^ 13 ^ 14 ^ 15a · 15b ^ 16 ^ 17 ^ 18a · 18b ^
    SP1:                                                              -     -           -                                                                           
    SP2:                                                                                -                                                                           
    SP3:                                                                                                                                                            
    SP4:                    -                                                                                                                                       
    SP5:                                                                    -                                                                                       

    ExUns: 19 ^ 20 ^ 21 ^ 22 ^ 23
    SP1:                              
    SP2:                              
    SP3:                              
    SP4:                              
    SP5:                              


    ECgene alternative splicing isoforms for DIS3

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    DIS3 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: GACCTTAATG

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See DIS3 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for DIS3

    SOURCE GeneReport for Unigene cluster: Hs.744104

    UniProtKB/Swiss-Prot: RRP44_HUMAN, Q9Y2L1
    Tissue specificity: Widely expressed

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    In Situ
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DIS3

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the last universal common ancestor (LUCA).

    Orthologs for DIS3 gene from 10/36 species (see all 36)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves DIS31 DIS3 mitotic control homolog (S. cerevisiae) 76.67(n)
    81.69(a)
      418821  XM_417016.2  XP_417016.2 
    lizard
    (Anolis carolinensis)
    Reptilia DIS36
    --
    81(a)
    1 ↔ 1
    3(88594537-88622530)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.326492 Xenopus laevis transcribed sequence with weak similarity more 77.78(n)    CA792887.1 
    zebrafish
    (Danio rerio)
    Actinopterygii dis31 DIS3 mitotic control homolog (S. cerevisiae) 68.07(n)
    74.45(a)
      100003553  XM_001336814.4  XP_001336850.2 
    fruit fly
    (Drosophila melanogaster)
    Insecta Dis31 , 3 3'-5' exoribonuclease3
    CG6413-PA1
    55(a)
    (best of 2)3
    55.78(n)1
    56.77(a)1
      429001  NM_142989.31  NP_651246.21 
    worm
    (Caenorhabditis elegans)
    Secernentea C04G2.63
    dis-31
    S.pombe mitotic control protein like3
    Protein DIS-31
    45(a)
    (best of 2)3
    53.5(n)1
    47.12(a)1
      IV(10097383-10106546)3
    1778751  NM_069434.31  NP_501835.21 
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes DIS3(YOL021C)4
    DIS31
    Exosome core complex catalytic subunit; possesses both more4
    Dis3p1
    53.24(n)1
    46.87(a)1
      15(285426-282421)4
    8541381, 4  NP_014621.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons EMB27631 exosome complex exonuclease DIS3/RRP44 54.3(n)
    50.95(a)
      816257  NM_001202612.1  NP_001189541.1 
    rice
    (Oryza sativa)
    Liliopsida Os03g01292001 hypothetical protein 54.21(n)
    50.82(a)
      4331494  NM_001055381.1  NP_001048846.1 
    E. coli
    (Escherichia coli)
    Gamma proteobacteria rnr6
    rnb6
    ribonuclease II
    20(a)
    19(a)
    possible ortholog
    possible ortholog
    Chromosome(4404677-4407118)
    Chromosome(1345002-1346936)


    ENSEMBL Gene Tree for DIS3 (if available)
    TreeFam Gene Tree for DIS3 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for DIS3 gene
    DIS3L2  DIS3L22  
    3 SIMAP similar genes for DIS3 using alignment to 4 protein entries:     RRP44_HUMAN (see all proteins):
    DIS3L    FLJ00327    DIS3L2

    DIS3 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/483 NCBI SNPs in DIS3 are shown (see all 483    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 13 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs80026681,2
    C,F,A,H,--73329086(+) GGCTCA/GTGCGA 3 -- ds5001 int112Minor allele frequency- G:0.20NA WA CSA EA 376
    rs1868657311,2
    --73329172(+) TACTGC/TCCCTT 3 -- ds5001 int10--------
    rs1434823741,2
    C,--73329251(+) TCCTAA/CTTAAA 3 -- ds5001 int10--------
    rs1480115211,2
    C,--73329258(+) TAAACC/TGAAAA 3 -- ds5001 int10--------
    rs1416083391,2
    C,--73329357(+) TAGAAC/TGCCTC 3 -- ut31 ds50010--------
    rs108871,2
    C,F,O,A,H,--73329358(+) AGAATA/GCCTCT 3 -- ds5001 ut3138Minor allele frequency- G:0.25MN NA NS EA WA CSA EU 4976
    rs2016883911,2
    --73329363(+) GCCTCC/TGTCAG 3 -- ds5001 ut310--------
    rs1920201811,2
    C,--73329397(+) TCCTCA/GCATAT 3 -- ds5001 ut310--------
    rs1446070131,2
    C,--73329399(+) CTCGCA/GTATAT 3 -- ut31 ds50010--------
    rs1839011291,2
    --73329425(+) CAACAG/TGATGG 3 -- ds5001 ut310--------

    HapMap Linkage Disequilibrium report for DIS3 (73329540 - 73356344 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for DIS3
         1 CNV: 101775

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing DIS3
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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    DIS3 for disorders           About GeneDecksing

    OMIM gene information: 607533    OMIM disorders: --

    5 diseases for DIS3:    About MalaCards
    nodular malignant melanoma    pneumonia    melanoma    malaria
    carcinoma


    Export disorders for DIS3 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for DIS3 gene, integrated from 9 sources (see all 37):
    (articles sorted by number of sources associating them with DIS3)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. A genomic map of a 6-Mb region at 13q21-q22 implicated in cancer development: identification and characterization of candidate genes. (PubMed id 11935316)1, 2, 3 Rozenblum E....Kallioniemi O.-P. (2002)
    2. Human dis3p, which binds to either GTP- or GDP-Ran, complements Saccharomyces cerevisiae dis3. (PubMed id 9562621)1, 2, 3 Shiomi T....Nishimoto T. (1998)
    3. Dis3-like 1: a novel exoribonuclease associated with the human exosome. (PubMed id 20531389)1, 2 Staals R.H....Pruijn G.J. (2010)
    4. The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L. (PubMed id 20531386)1, 2 Tomecki R....Jensen T.H. (2010)
    5. RNA exosome depletion reveals transcription upstream of active human promoters. (PubMed id 19056938)1, 2 Preker P.... Jensen T.H. (2008)
    6. The DNA sequence and analysis of human chromosome 13. (PubMed id 15057823)1, 2 Dunham A.... Ross M.T. (2004)
    7. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
    8. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
    9. Functional proteomic analysis of human nucleolus. (PubMed id 12429849)1, 2 Scherl A.... Diaz J.-J. (2002)
    10. Construction of expression-ready cDNA clones for KIAA genes: manual curation of 330 KIAA cDNA clones. (PubMed id 12168954)1, 2 Nakajima D.... Nagase T. (2002)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 22894 HGNC: 20604 AceView: KIAA1008 Ensembl:ENSG00000083520 euGenes: HUgn22894
    ECgene: DIS3 Kegg: 22894 H-InvDB: DIS3

    (According to HUGE)
    About This Section
    HUGE: KIAA1008

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for DIS3 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for DIS3 gene:
    Search GeneIP for patents involving DIS3

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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