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Aliases for DIO2-AS1 Gene

Subcategory (RNA class) for DIO2-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DIO2-AS1 Gene

  • DIO2 Antisense RNA 1 2 3 5
  • DIO2 Antisense RNA 1 (Non-Protein Coding) 2 3
  • CTD-2540C19.1 3

External Ids for DIO2-AS1 Gene

Previous GeneCards Identifiers for DIO2-AS1 Gene

  • GC14P080679

Summaries for DIO2-AS1 Gene

GeneCards Summary for DIO2-AS1 Gene

DIO2-AS1 (DIO2 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DIO2-AS1 Gene

Genomics for DIO2-AS1 Gene

Regulatory Elements for DIO2-AS1 Gene

Enhancers for DIO2-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F080214 0.9 Ensembl ENCODE 0.8 +4.6 4595 2.1 PKNOX1 SIN3A NR3C1 JUND GATA3 MAFF CTBP1 NFE2 FOS FOXP2 DIO2 DIO2-AS1
GH14F080212 0.8 ENCODE 0.8 +1.0 1035 0.7 GTF2F1 TBP TAF1 JUN RAD21 BRCA1 RFX5 ZNF7 GATA3 POLR2A DIO2-AS1 DIO2
GH14F080315 0.2 ENCODE 0.1 +104.9 104871 1.1 DIO2 DIO2-AS1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DIO2-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for DIO2-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000421580 282 1400 GTF2F1 TBP TAF1 JUN MAX BRCA1 RAD21 RFX5 ZNF7 GATA3

Genomic Location for DIO2-AS1 Gene

Chromosome:
14
Start:
80,211,419 bp from pter
End:
80,455,469 bp from pter
Size:
244,051 bases
Orientation:
Plus strand

Genomic View for DIO2-AS1 Gene

Genes around DIO2-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DIO2-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DIO2-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DIO2-AS1 Gene

Proteins for DIO2-AS1 Gene

Post-translational modifications for DIO2-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DIO2-AS1 Gene

Domains & Families for DIO2-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DIO2-AS1 Gene

Function for DIO2-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DIO2-AS1 Gene

Localization for DIO2-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DIO2-AS1 Gene

Pathways & Interactions for DIO2-AS1 Gene

SuperPathways for DIO2-AS1 Gene

No Data Available

Interacting Proteins for DIO2-AS1 Gene

Gene Ontology (GO) - Biological Process for DIO2-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DIO2-AS1 Gene

Transcripts for DIO2-AS1 Gene

mRNA/cDNA for DIO2-AS1 Gene

(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DIO2-AS1 Gene

DIO2 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DIO2-AS1 Gene

No ASD Table

Relevant External Links for DIO2-AS1 Gene

GeneLoc Exon Structure for
DIO2-AS1
ECgene alternative splicing isoforms for
DIO2-AS1

Expression for DIO2-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DIO2-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DIO2-AS1 Gene

This gene is overexpressed in Testis (x20.4), Esophagus - Mucosa (x11.3), Muscle - Skeletal (x9.7), and Minor Salivary Gland (x4.1).

SOURCE GeneReport for Unigene cluster for DIO2-AS1 Gene:

Hs.623865
genes like me logo Genes that share expression patterns with DIO2-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DIO2-AS1 Gene

Orthologs for DIO2-AS1 Gene

Evolution for DIO2-AS1 Gene

ENSEMBL:
Gene Tree for DIO2-AS1 (if available)
TreeFam:
Gene Tree for DIO2-AS1 (if available)

No data available for Orthologs for DIO2-AS1 Gene

Paralogs for DIO2-AS1 Gene

No data available for Paralogs for DIO2-AS1 Gene

Variants for DIO2-AS1 Gene

Sequence variations from dbSNP and Humsavar for DIO2-AS1 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs10129314 -- 80,295,599(+) CCAAG(A/G)TAACA intron-variant
rs10129556 -- 80,448,550(+) TTTGA(A/C)GGTAT intron-variant
rs10130835 -- 80,308,011(+) ATTCA(C/T)GCTGG intron-variant
rs10130983 -- 80,277,861(+) ATTAG(A/G)TTGTT intron-variant
rs10131023 -- 80,247,987(+) cattt(A/C)ttgat intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DIO2-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv85424 CNV deletion 16902084
nsv565289 CNV loss 21841781
nsv565285 CNV loss 21841781
nsv523797 CNV loss 19592680
nsv520394 CNV loss 19592680
nsv1373 CNV insertion 18451855
nsv1372 CNV insertion 18451855
nsv1371 CNV deletion 18451855
nsv1045241 CNV gain 25217958
esv3635066 CNV loss 21293372
esv29285 CNV loss 19812545
esv274918 CNV gain+loss 21479260
esv2677326 CNV deletion 23128226
esv26502 CNV gain 19812545
esv25191 CNV gain 19812545
esv2452619 CNV deletion 19546169
dgv3801n54 CNV loss 21841781
dgv135e215 CNV deletion 23714750

Relevant External Links for DIO2-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DIO2-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DIO2-AS1 Gene

Disorders for DIO2-AS1 Gene

Relevant External Links for DIO2-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DIO2-AS1

No disorders were found for DIO2-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DIO2-AS1 Gene

Publications for DIO2-AS1 Gene

No publications were found for DIO2-AS1 Gene.

Products for DIO2-AS1 Gene

Sources for DIO2-AS1 Gene

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