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Aliases for DIAPH3-AS2 Gene

Subcategory (RNA class) for DIAPH3-AS2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DIAPH3-AS2 Gene

  • DIAPH3 Antisense RNA 2 2 3 5
  • DIAPH3 Antisense RNA 2 (Non-Protein Coding) 2 3
  • DIPAH3-AS2 3

External Ids for DIAPH3-AS2 Gene

Previous GeneCards Identifiers for DIAPH3-AS2 Gene

  • GC13P060720

Summaries for DIAPH3-AS2 Gene

GeneCards Summary for DIAPH3-AS2 Gene

DIAPH3-AS2 (DIAPH3 Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DIAPH3-AS2 Gene

Genomics for DIAPH3-AS2 Gene

Regulatory Elements for DIAPH3-AS2 Gene

Enhancers for DIAPH3-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13G060166 0.4 ENCODE 10.6 +22.3 22284 0.2 ZNF664 DIAPH3-AS2 DIAPH3 GC13M060165 GC13M060166
GH13G060169 0.4 ENCODE 10.6 +25.0 24952 1.2 GATA3 ZNF10 DIAPH3-AS2 DIAPH3 GC13M060166 GC13M060188 RNY4P28
GH13G060167 0.2 ENCODE 10.6 +22.6 22634 0.1 DIAPH3-AS2 GC13M060166 GC13M060188 RNY4P28
GH13G060171 0.2 ENCODE 10.5 +27.6 27616 0.7 DIAPH3-AS2 GC13M060166 GC13M060188 RNY4P28
GH13G060161 1.3 Ensembl ENCODE 0.4 +19.2 19176 5.0 PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 YY1 ZNF143 ZNF207 FOS SP3 TDRD3 DIAPH3 DIAPH3-AS2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DIAPH3-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for DIAPH3-AS2 Gene

Chromosome:
13
Start:
60,144,698 bp from pter
End:
60,153,505 bp from pter
Size:
8,808 bases
Orientation:
Plus strand

Genomic View for DIAPH3-AS2 Gene

Genes around DIAPH3-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DIAPH3-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DIAPH3-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DIAPH3-AS2 Gene

Proteins for DIAPH3-AS2 Gene

Post-translational modifications for DIAPH3-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DIAPH3-AS2 Gene

Domains & Families for DIAPH3-AS2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DIAPH3-AS2 Gene

Function for DIAPH3-AS2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DIAPH3-AS2 Gene

Localization for DIAPH3-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DIAPH3-AS2 Gene

Pathways & Interactions for DIAPH3-AS2 Gene

SuperPathways for DIAPH3-AS2 Gene

No Data Available

Interacting Proteins for DIAPH3-AS2 Gene

Gene Ontology (GO) - Biological Process for DIAPH3-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DIAPH3-AS2 Gene

Drugs & Compounds for DIAPH3-AS2 Gene

No Compound Related Data Available

Transcripts for DIAPH3-AS2 Gene

mRNA/cDNA for DIAPH3-AS2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DIAPH3-AS2 Gene

DIAPH3 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DIAPH3-AS2 Gene

No ASD Table

Relevant External Links for DIAPH3-AS2 Gene

GeneLoc Exon Structure for
DIAPH3-AS2
ECgene alternative splicing isoforms for
DIAPH3-AS2

Expression for DIAPH3-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DIAPH3-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for DIAPH3-AS2 Gene

This gene is overexpressed in Testis (x53.0).

SOURCE GeneReport for Unigene cluster for DIAPH3-AS2 Gene:

Hs.662188
genes like me logo Genes that share expression patterns with DIAPH3-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DIAPH3-AS2 Gene

Orthologs for DIAPH3-AS2 Gene

Evolution for DIAPH3-AS2 Gene

ENSEMBL:
Gene Tree for DIAPH3-AS2 (if available)
TreeFam:
Gene Tree for DIAPH3-AS2 (if available)

No data available for Orthologs for DIAPH3-AS2 Gene

Paralogs for DIAPH3-AS2 Gene

No data available for Paralogs for DIAPH3-AS2 Gene

Variants for DIAPH3-AS2 Gene

Sequence variations from dbSNP and Humsavar for DIAPH3-AS2 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type
rs1000108307 -- 60,148,923(+) CTCTT(C/G)AAATC intron-variant
rs1000307331 -- 60,148,584(+) AAATC(-/A)AAAGA intron-variant
rs1000914239 -- 60,146,841(+) GCTGA(C/T)AGCCA intron-variant
rs1001003887 -- 60,144,084(+) TTTGT(A/G)TGTCG intron-variant, upstream-variant-2KB
rs1001580229 -- 60,150,197(+) TTTTG(C/T)ATTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DIAPH3-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv1044002 CNV gain 25217958
nsv832622 CNV gain+loss 17160897

Relevant External Links for DIAPH3-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DIAPH3-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DIAPH3-AS2 Gene

Disorders for DIAPH3-AS2 Gene

Relevant External Links for DIAPH3-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DIAPH3-AS2

No disorders were found for DIAPH3-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DIAPH3-AS2 Gene

Publications for DIAPH3-AS2 Gene

  1. Rapid cDNA sequencing (expressed sequence tags) from a directionally cloned human infant brain cDNA library. (PMID: 8401585) Adams M.D. … Venter J.C. (Nat. Genet. 1993) 3 64

Products for DIAPH3-AS2 Gene

Sources for DIAPH3-AS2 Gene

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