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Aliases for DHRS4L2 Gene

Aliases for DHRS4L2 Gene

  • Dehydrogenase/Reductase 4 Like 2 2 3 5
  • Short Chain Dehydrogenase/Reductase Family 25C Member 3 3 4
  • Dehydrogenase/Reductase (SDR Family) Member 4 Like 2 2 3
  • SDR25C3 3 4
  • NADP(H)-Dependent Retinol Dehydrogenase/Reductase Short Isoform-Like Protein 3
  • NADPH-Dependent Retinol Dehydrogenase/Reductase-Like Protein 2 3
  • Short Chain Dehydrogenase/Reductase Family 25C, Member 3 2
  • Dehydrogenase/Reductase (SDR Family) Member 4 Like 2A3 3
  • Dehydrogenase/Reductase SDR Family Member 4-Like 2 3
  • EC 1.1.1.184 58
  • EC 1.1.-.- 4
  • EC 1.1.1 58

External Ids for DHRS4L2 Gene

Previous GeneCards Identifiers for DHRS4L2 Gene

  • GC14U900021
  • GC14P022448
  • GC14P023527
  • GC14P024458
  • GC14P004556
  • GC14P024444
  • GC14P023970
  • GC14P023971

Summaries for DHRS4L2 Gene

Entrez Gene Summary for DHRS4L2 Gene

  • This gene encodes a member of the short chain dehydrogenase reductase family. The encoded protein may be an NADPH dependent retinol oxidoreductase. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Aug 2010]

GeneCards Summary for DHRS4L2 Gene

DHRS4L2 (Dehydrogenase/Reductase 4 Like 2) is a Protein Coding gene. Among its related pathways are Drug metabolism - cytochrome P450 and Metabolism. GO annotations related to this gene include oxidoreductase activity. An important paralog of this gene is DHRS4.

UniProtKB/Swiss-Prot for DHRS4L2 Gene

  • Probable oxidoreductase.

Additional gene information for DHRS4L2 Gene

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DHRS4L2 Gene

Genomics for DHRS4L2 Gene

Regulatory Elements for DHRS4L2 Gene

Enhancers for DHRS4L2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14H024006 1.1 Ensembl ENCODE 17.1 +37.1 37127 2 FOXA2 SIN3A KLF17 ZNF2 RCOR1 EGR2 ZEB2 ZNF398 ZNF610 KLF16 DHRS4L2 C14orf93 ADCY4 DHRS4L1 DHRS4-AS1
GH14H023988 0.9 ENCODE 19.4 +19.3 19343 1 ELF3 PKNOX1 MLX ZFP64 ARID4B SIN3A DMAP1 BATF RAD21 RARA DHRS4L2 DHRS4L1 DHRS4-AS1
GH14H024032 1.2 Ensembl ENCODE 13.4 +63.5 63461 1 PKNOX1 FOXA2 MLX ARID4B SIN3A TCF12 FOS REST KAT8 NFIL3 DHRS4L2 DHRS4 PCK2 NRL PIR58946 DHRS4L1
GH14H024035 1.1 ENCODE 12.7 +66.7 66723 1 HDGF ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 ZNF143 ACIN1 DHRS4L1 RNA5SP383 KHNYN TM9SF1 LINC00596 RN7SKP205 LOC105370409 C14orf119 LOC102724814
GH14H023931 0.8 ENCODE 16.4 -37.6 -37632 0 HDAC1 TAL1 PYGO2 CCNT2 CTBP1 GATA2 NCOR1 SMARCE1 RFX1 SOX6 DHRS4L2 LOC105370411 LINC00596
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DHRS4L2 on UCSC Golden Path with GeneCards custom track

Promoters for DHRS4L2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000066800 226 601 FOXA2 RB1 ARID4B DMAP1 RARA MIXL1 MXD4 MIER2 KAT8 NFIL3

Genomic Location for DHRS4L2 Gene

Chromosome:
14
Start:
23,969,874 bp from pter
End:
24,006,408 bp from pter
Size:
36,535 bases
Orientation:
Plus strand

Genomic View for DHRS4L2 Gene

Genes around DHRS4L2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DHRS4L2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DHRS4L2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DHRS4L2 Gene

Proteins for DHRS4L2 Gene

  • Protein details for DHRS4L2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6PKH6-DR4L2_HUMAN
    Recommended name:
    Dehydrogenase/reductase SDR family member 4-like 2
    Protein Accession:
    Q6PKH6
    Secondary Accessions:
    • Q3YLD4

    Protein attributes for DHRS4L2 Gene

    Size:
    230 amino acids
    Molecular mass:
    24586 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for DHRS4L2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DHRS4L2 Gene

Selected DME Specific Peptides for DHRS4L2 Gene

Q6PKH6:
  • DILVSNAAVNPFFG
  • TEEVWDK
  • SSRKQQNVD
  • NKVALVT
  • VCHVGKAEDRE

Post-translational modifications for DHRS4L2 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Domains & Families for DHRS4L2 Gene

Gene Families for DHRS4L2 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins
  • Predicted secreted proteins

Protein Domains for DHRS4L2 Gene

Graphical View of Domain Structure for InterPro Entry

Q6PKH6

UniProtKB/Swiss-Prot:

DR4L2_HUMAN :
  • Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Family:
  • Belongs to the short-chain dehydrogenases/reductases (SDR) family.
genes like me logo Genes that share domains with DHRS4L2: view

Function for DHRS4L2 Gene

Molecular function for DHRS4L2 Gene

UniProtKB/Swiss-Prot Function:
Probable oxidoreductase.

Enzyme Numbers (IUBMB) for DHRS4L2 Gene

Gene Ontology (GO) - Molecular Function for DHRS4L2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016491 oxidoreductase activity IEA --
genes like me logo Genes that share ontologies with DHRS4L2: view
genes like me logo Genes that share phenotypes with DHRS4L2: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

No data available for Phenotypes From GWAS Catalog , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DHRS4L2 Gene

Localization for DHRS4L2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DHRS4L2 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DHRS4L2 gene
Compartment Confidence
mitochondrion 4
extracellular 3
peroxisome 2
nucleus 2
cytosol 2

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nuclear membrane (1)
  • Vesicles (1)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for DHRS4L2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with DHRS4L2: view

Pathways & Interactions for DHRS4L2 Gene

genes like me logo Genes that share pathways with DHRS4L2: view

Pathways by source for DHRS4L2 Gene

2 KEGG pathways for DHRS4L2 Gene

Interacting Proteins for DHRS4L2 Gene

Gene Ontology (GO) - Biological Process for DHRS4L2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0055114 oxidation-reduction process IEA --
genes like me logo Genes that share ontologies with DHRS4L2: view

No data available for SIGNOR curated interactions for DHRS4L2 Gene

Drugs & Compounds for DHRS4L2 Gene

(1) Drugs for DHRS4L2 Gene - From: DrugBank

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Matairesinol Experimental Pharma Target 0
genes like me logo Genes that share compounds with DHRS4L2: view

Transcripts for DHRS4L2 Gene

Unigene Clusters for DHRS4L2 Gene

Dehydrogenase/reductase (SDR family) member 4 like 2:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for DHRS4L2 Gene

No ASD Table

Relevant External Links for DHRS4L2 Gene

GeneLoc Exon Structure for
DHRS4L2
ECgene alternative splicing isoforms for
DHRS4L2

Expression for DHRS4L2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DHRS4L2 Gene

Protein differential expression in normal tissues from HIPED for DHRS4L2 Gene

This gene is overexpressed in Heart (61.4) and Skin (7.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for DHRS4L2 Gene



Protein tissue co-expression partners for DHRS4L2 Gene

NURSA nuclear receptor signaling pathways regulating expression of DHRS4L2 Gene:

DHRS4L2

SOURCE GeneReport for Unigene cluster for DHRS4L2 Gene:

Hs.743442

Evidence on tissue expression from TISSUES for DHRS4L2 Gene

  • Intestine(4.2)
  • Nervous system(2.4)
genes like me logo Genes that share expression patterns with DHRS4L2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for DHRS4L2 Gene

Orthologs for DHRS4L2 Gene

This gene was present in the common ancestor of animals.

Orthologs for DHRS4L2 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia DHRS4 34
  • 63 (a)
OneToMany
dog
(Canis familiaris)
Mammalia DHRS4 34
  • 63 (a)
OneToMany
mouse
(Mus musculus)
Mammalia Dhrs4 34
  • 61 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia DHRS4L1 34
  • 60 (a)
ManyToMany
oppossum
(Monodelphis domestica)
Mammalia -- 34
  • 44 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 34
  • 25 (a)
ManyToMany
-- 34
  • 18 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 34
  • 49 (a)
OneToMany
zebrafish
(Danio rerio)
Actinopterygii DHRS2 34
  • 46 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG10672 34
  • 32 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea dhs-13 34
  • 39 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 34
  • 38 (a)
ManyToMany
-- 34
  • 21 (a)
ManyToMany
Species where no ortholog for DHRS4L2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)

Evolution for DHRS4L2 Gene

ENSEMBL:
Gene Tree for DHRS4L2 (if available)
TreeFam:
Gene Tree for DHRS4L2 (if available)

Paralogs for DHRS4L2 Gene

Paralogs for DHRS4L2 Gene

Pseudogenes.org Pseudogenes for DHRS4L2 Gene

genes like me logo Genes that share paralogs with DHRS4L2: view

Variants for DHRS4L2 Gene

Sequence variations from dbSNP and Humsavar for DHRS4L2 Gene

SNP ID Clin Chr 14 pos Sequence Context AA Info Type
rs1000018297 -- 23,999,391(+) AAGCA(A/T)AAGAA intron-variant
rs1000350673 -- 23,982,010(+) GCCTT(C/T)CTCTA intron-variant
rs1000406302 -- 23,982,106(+) TCTCC(C/T)ATCCC intron-variant
rs1000450623 -- 23,987,701(+) TCCAC(A/G)ATAAA intron-variant, upstream-variant-2KB
rs1000693919 -- 23,983,110(+) TGGAA(C/G)AAAAT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DHRS4L2 Gene

Variant ID Type Subtype PubMed ID
dgv1837n100 CNV loss 25217958
dgv1838n100 CNV gain 25217958
dgv1839n100 CNV loss 25217958
dgv1840n100 CNV gain+loss 25217958
dgv1841n100 CNV gain+loss 25217958
dgv1842n100 CNV loss 25217958
dgv1843n100 CNV gain+loss 25217958
dgv1844n100 CNV gain 25217958
dgv1845n100 CNV loss 25217958
dgv1846n100 CNV loss 25217958
dgv1847n100 CNV gain 25217958
dgv1848n100 CNV gain 25217958
dgv20n47 CNV gain 21111241
dgv3580n54 CNV loss 21841781
dgv36e203 CNV gain+loss 21179565
dgv617e212 CNV loss 25503493
dgv618e212 CNV loss 25503493
esv1586699 CNV deletion 17803354
esv2421714 CNV deletion 20811451
esv2748487 CNV deletion 23290073
esv2748488 CNV deletion 23290073
esv28806 CNV loss 19812545
esv33403 CNV loss 17666407
esv3551252 CNV deletion 23714750
esv3581079 CNV loss 25503493
esv3633790 CNV loss 21293372
esv3633791 CNV gain 21293372
esv3633792 CNV loss 21293372
esv3633793 CNV loss 21293372
esv3633794 CNV loss 21293372
esv3633795 CNV loss 21293372
esv3633796 CNV gain 21293372
esv3892477 CNV loss 25118596
esv3892478 CNV loss 25118596
esv988372 CNV deletion 20482838
nsv1052180 CNV loss 25217958
nsv1217 CNV deletion 18451855
nsv1218 CNV insertion 18451855
nsv436726 CNV insertion 17901297
nsv436830 CNV insertion 17901297
nsv482169 CNV gain 20164927
nsv509528 CNV insertion 20534489
nsv510630 CNV deletion 20534489
nsv511030 OTHER complex 20534489
nsv512352 CNV loss 21212237
nsv513749 CNV insertion 21212237
nsv564046 CNV loss 21841781
nsv564047 CNV loss 21841781
nsv564048 CNV loss 21841781
nsv826901 CNV loss 20364138
nsv84893 CNV deletion 16902084
nsv89 CNV deletion 15895083
nsv91 CNV deletion 15895083
nsv9124 CNV loss 18304495
nsv976322 CNV duplication 23825009
nsv983806 CNV duplication 23825009
nsv983807 CNV duplication 23825009

Variation tolerance for DHRS4L2 Gene

Residual Variation Intolerance Score: 95.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 12.47; 94.33% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DHRS4L2 Gene

Human Gene Mutation Database (HGMD)
DHRS4L2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
DHRS4L2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DHRS4L2 Gene

Disorders for DHRS4L2 Gene

Relevant External Links for DHRS4L2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DHRS4L2

No disorders were found for DHRS4L2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DHRS4L2 Gene

Publications for DHRS4L2 Gene

  1. Non-EST based prediction of exon skipping and intron retention events using Pfam information. (PMID: 16204458) Hiller M … Backofen R (Nucleic acids research 2005) 3 4 60
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 60
  3. Architecture of the human interactome defines protein communities and disease networks. (PMID: 28514442) Huttlin EL … Harper JW (Nature 2017) 3 60
  4. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin EL … Gygi SP (Cell 2015) 3 60
  5. Molecular and functional evolution of human DHRS2 and DHRS4 duplicated genes. (PMID: 23036705) Gabrielli F … Tofanelli S (Gene 2012) 3 60

Products for DHRS4L2 Gene

Sources for DHRS4L2 Gene

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