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Aliases for DHRS13 Gene

Aliases for DHRS13 Gene

  • Dehydrogenase/Reductase 13 2 3 5
  • Short Chain Dehydrogenase/Reductase Family 7C Member 5 3 4
  • Dehydrogenase/Reductase (SDR Family) Member 13 2 3
  • SDR7C5 3 4
  • Short Chain Dehydrogenase/Reductase Family 7C, Member 5 2
  • Dehydrogenase/Reductase SDR Family Member 13 3
  • EC 1.1.-.- 4

External Ids for DHRS13 Gene

Previous GeneCards Identifiers for DHRS13 Gene

  • GC17M024249
  • GC17M027224
  • GC17M023433

Summaries for DHRS13 Gene

GeneCards Summary for DHRS13 Gene

DHRS13 (Dehydrogenase/Reductase 13) is a Protein Coding gene. GO annotations related to this gene include oxidoreductase activity and coenzyme binding. An important paralog of this gene is RDH12.

UniProtKB/Swiss-Prot for DHRS13 Gene

  • Putative oxidoreductase.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DHRS13 Gene

Genomics for DHRS13 Gene

Regulatory Elements for DHRS13 Gene

Enhancers for DHRS13 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17F028863 1.5 FANTOM5 Ensembl ENCODE 42.9 +37.7 37735 3.3 HDGF ATF1 ARNT CREB3L1 ARID4B ZNF48 ELK1 GATA2 KLF13 JUNB DHRS13 PROCA1 MIR4723 FLOT2 NEK8 TLCD1 SNORD42A SNORD4B SNORD42B RAB34
GH17F028872 0.6 FANTOM5 21.3 +30.2 30154 0.2 HDAC1 PKNOX1 NFRKB GATA2 SCRT2 CREM ZBTB2 ZEB2 CREB3 MBD2 DHRS13 FLOT2 MIR144 MIR451A MIR4732 ENSG00000264304
GH17F028923 0.8 FANTOM5 Ensembl ENCODE 12.4 -23.0 -22993 4.8 PKNOX1 ATF1 FEZF1 CBX5 FOS PAF1 NCOA1 JUNB TSHZ1 TBX21 PHF12 FLOT2 DHRS13 ERAL1 FAM222B SEZ6 SNORD42A SNORD4A SNORD4B PROCA1
GH17F028936 1.5 FANTOM5 Ensembl ENCODE 12.2 -34.1 -34130 2.4 ELF3 PKNOX1 ARID4B GATA4 SCRT2 CREM MIXL1 THAP11 CEBPB MIER2 FLOT2 PHF12 DHRS13 TIAF1 NUFIP2 UNC119 SDF2 TAOK1 ENSG00000265908 LOC101927018
GH17F028939 1.1 Ensembl ENCODE 12.2 -37.3 -37294 1.3 ZNF664 SMARCA4 DHRS13 FLOT2 ENSG00000265908 LOC101927018
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DHRS13 on UCSC Golden Path with GeneCards custom track

Promoters for DHRS13 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001343508 471 1601 HDGF PKNOX1 ARNT CREB3L1 WRNIP1 ARID4B SIN3A DMAP1 ZNF2 ZNF207

Genomic Location for DHRS13 Gene

Chromosome:
17
Start:
28,897,781 bp from pter
End:
28,903,071 bp from pter
Size:
5,291 bases
Orientation:
Minus strand

Genomic View for DHRS13 Gene

Genes around DHRS13 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DHRS13 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DHRS13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DHRS13 Gene

Proteins for DHRS13 Gene

  • Protein details for DHRS13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q6UX07-DHR13_HUMAN
    Recommended name:
    Dehydrogenase/reductase SDR family member 13
    Protein Accession:
    Q6UX07
    Secondary Accessions:
    • B4DJC5
    • Q96BH7

    Protein attributes for DHRS13 Gene

    Size:
    377 amino acids
    Molecular mass:
    40849 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for DHRS13 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DHRS13 Gene

Post-translational modifications for DHRS13 Gene

  • Ubiquitination at Lys 201
  • Modification sites at PhosphoSitePlus

Other Protein References for DHRS13 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DHRS13 Gene

Domains & Families for DHRS13 Gene

Gene Families for DHRS13 Gene

Suggested Antigen Peptide Sequences for DHRS13 Gene

Graphical View of Domain Structure for InterPro Entry

Q6UX07

UniProtKB/Swiss-Prot:

DHR13_HUMAN :
  • Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Family:
  • Belongs to the short-chain dehydrogenases/reductases (SDR) family.
genes like me logo Genes that share domains with DHRS13: view

Function for DHRS13 Gene

Molecular function for DHRS13 Gene

UniProtKB/Swiss-Prot Function:
Putative oxidoreductase.

Enzyme Numbers (IUBMB) for DHRS13 Gene

Gene Ontology (GO) - Molecular Function for DHRS13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016491 oxidoreductase activity IEA --
genes like me logo Genes that share ontologies with DHRS13: view
genes like me logo Genes that share phenotypes with DHRS13: view

Animal Model Products

miRNA for DHRS13 Gene

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for DHRS13 Gene

Localization for DHRS13 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DHRS13 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DHRS13 Gene COMPARTMENTS Subcellular localization image for DHRS13 gene
Compartment Confidence
extracellular 4
cytosol 2
endoplasmic reticulum 1
lysosome 1
mitochondrion 1
peroxisome 1
plasma membrane 1
vacuole 1

Gene Ontology (GO) - Cellular Components for DHRS13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
GO:0016020 membrane IDA 19946888
genes like me logo Genes that share ontologies with DHRS13: view

Pathways & Interactions for DHRS13 Gene

SuperPathways for DHRS13 Gene

No Data Available

Interacting Proteins for DHRS13 Gene

Gene Ontology (GO) - Biological Process for DHRS13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0055114 oxidation-reduction process IEA --
genes like me logo Genes that share ontologies with DHRS13: view

No data available for Pathways by source and SIGNOR curated interactions for DHRS13 Gene

Transcripts for DHRS13 Gene

Unigene Clusters for DHRS13 Gene

Dehydrogenase/reductase (SDR family) member 13:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for DHRS13 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4 ^ 5
SP1:
SP2:

Relevant External Links for DHRS13 Gene

GeneLoc Exon Structure for
DHRS13
ECgene alternative splicing isoforms for
DHRS13

Expression for DHRS13 Gene

mRNA expression in normal human tissues for DHRS13 Gene

mRNA differential expression in normal tissues according to GTEx for DHRS13 Gene

This gene is overexpressed in Whole Blood (x13.2).

Protein differential expression in normal tissues from HIPED for DHRS13 Gene

This gene is overexpressed in Lung (11.4), Retina (10.3), Platelet (8.7), Adrenal (8.6), and Breast (7.9).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, MaxQB, and MOPED for DHRS13 Gene



Protein tissue co-expression partners for DHRS13 Gene

NURSA nuclear receptor signaling pathways regulating expression of DHRS13 Gene:

DHRS13

SOURCE GeneReport for Unigene cluster for DHRS13 Gene:

Hs.631760
genes like me logo Genes that share expression patterns with DHRS13: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery and mRNA Expression by UniProt/SwissProt for DHRS13 Gene

Orthologs for DHRS13 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for DHRS13 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DHRS13 34 35
  • 99.66 (n)
dog
(Canis familiaris)
Mammalia DHRS13 34
  • 88.8 (n)
-- 35
  • 36 (a)
ManyToMany
cow
(Bos Taurus)
Mammalia DHRS13 34 35
  • 87.2 (n)
mouse
(Mus musculus)
Mammalia Dhrs13 34 16 35
  • 84.45 (n)
rat
(Rattus norvegicus)
Mammalia RGD1305508 34
  • 81.14 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia DHRS13 35
  • 76 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia DHRS13 35
  • 73 (a)
OneToOne
chicken
(Gallus gallus)
Aves DHRS13 35
  • 50 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia DHRS13 35
  • 52 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia dhrs13 34
  • 60.4 (n)
zebrafish
(Danio rerio)
Actinopterygii dhrs13a.3 34 35
  • 55.78 (n)
dhrs13a.1 35
  • 51 (a)
OneToMany
dhrs13l1 35
  • 50 (a)
OneToMany
dhrs13a.2 35
  • 49 (a)
OneToMany
dhrs13b 35
  • 47 (a)
OneToMany
CU638740.1 35
  • 43 (a)
OneToMany
DHRS13 (5 of 7) 35
  • 41 (a)
OneToMany
fruit fly
(Drosophila melanogaster)
Insecta CG31235 35
  • 28 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea dhs-22 35
  • 32 (a)
ManyToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes ENV9 35
  • 23 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 22 (a)
ManyToMany
Species where no ortholog for DHRS13 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for DHRS13 Gene

ENSEMBL:
Gene Tree for DHRS13 (if available)
TreeFam:
Gene Tree for DHRS13 (if available)

Paralogs for DHRS13 Gene

Paralogs for DHRS13 Gene

(4) SIMAP similar genes for DHRS13 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with DHRS13: view

Variants for DHRS13 Gene

Sequence variations from dbSNP and Humsavar for DHRS13 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs111522470 -- 28,903,672(+) TTCCT(-/TTCC)TTCCT upstream-variant-2KB
rs112181429 -- 28,898,336(+) AACCA(C/T)GGAGG upstream-variant-2KB, utr-variant-3-prime
rs112464977 -- 28,897,798(+) CGCGC(G/T)TTATT upstream-variant-2KB, utr-variant-3-prime
rs112491750 -- 28,902,713(+) ACCGC(C/G)GGCGG intron-variant
rs112772847 -- 28,904,136(+) ACAGG(A/C)TAGAG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DHRS13 Gene

Variant ID Type Subtype PubMed ID
nsv457719 CNV loss 19166990
nsv574662 CNV loss 21841781

Variation tolerance for DHRS13 Gene

Residual Variation Intolerance Score: 74.1% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.82; 34.22% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DHRS13 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DHRS13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DHRS13 Gene

Disorders for DHRS13 Gene

Relevant External Links for DHRS13

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DHRS13

No disorders were found for DHRS13 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DHRS13 Gene

Publications for DHRS13 Gene

  1. The SDR (short-chain dehydrogenase/reductase and related enzymes) nomenclature initiative. (PMID: 19027726) Persson B. … Oppermann U. (Chem. Biol. Interact. 2009) 2 3 4 64
  2. The secreted protein discovery initiative (SPDI), a large-scale effort to identify novel human secreted and transmembrane proteins: a bioinformatics assessment. (PMID: 12975309) Clark H.F. … Gray A.M. (Genome Res. 2003) 2 3 4 64
  3. The BioPlex Network: A Systematic Exploration of the Human Interactome. (PMID: 26186194) Huttlin E.L. … Gygi S.P. (Cell 2015) 3 64
  4. A human interactome in three quantitative dimensions organized by stoichiometries and abundances. (PMID: 26496610) Hein M.Y. … Mann M. (Cell 2015) 3 64
  5. Defining the membrane proteome of NK cells. (PMID: 19946888) Ghosh D. … Wilkins J.A. (J Mass Spectrom 2010) 3 64

Products for DHRS13 Gene

Sources for DHRS13 Gene

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