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Aliases for DENND5B-AS1 Gene

Subcategory (RNA class) for DENND5B-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DENND5B-AS1 Gene

  • DENND5B Antisense RNA 1 2 3 5
  • DENND5B Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DENND5B-AS1 Gene

Previous GeneCards Identifiers for DENND5B-AS1 Gene

  • GC00U933706
  • GC12P031743

Summaries for DENND5B-AS1 Gene

GeneCards Summary for DENND5B-AS1 Gene

DENND5B-AS1 (DENND5B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DENND5B-AS1 Gene

Genomics for DENND5B-AS1 Gene

Regulatory Elements for DENND5B-AS1 Gene

Promoters for DENND5B-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around DENND5B-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DENND5B-AS1 Gene

Chromosome:
12
Start:
31,589,923 bp from pter
End:
31,615,666 bp from pter
Size:
25,744 bases
Orientation:
Plus strand

Genomic View for DENND5B-AS1 Gene

Genes around DENND5B-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DENND5B-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DENND5B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DENND5B-AS1 Gene

Proteins for DENND5B-AS1 Gene

Post-translational modifications for DENND5B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DENND5B-AS1 Gene

Domains & Families for DENND5B-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DENND5B-AS1 Gene

Function for DENND5B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DENND5B-AS1 Gene

Localization for DENND5B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DENND5B-AS1 Gene

Pathways & Interactions for DENND5B-AS1 Gene

SuperPathways for DENND5B-AS1 Gene

No Data Available

Interacting Proteins for DENND5B-AS1 Gene

Gene Ontology (GO) - Biological Process for DENND5B-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DENND5B-AS1 Gene

Drugs & Compounds for DENND5B-AS1 Gene

No Compound Related Data Available

Transcripts for DENND5B-AS1 Gene

mRNA/cDNA for DENND5B-AS1 Gene

(1) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DENND5B-AS1 Gene

DENND5B antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DENND5B-AS1 Gene

No ASD Table

Relevant External Links for DENND5B-AS1 Gene

GeneLoc Exon Structure for
DENND5B-AS1
ECgene alternative splicing isoforms for
DENND5B-AS1

Expression for DENND5B-AS1 Gene

mRNA expression in normal human tissues for DENND5B-AS1 Gene

SOURCE GeneReport for Unigene cluster for DENND5B-AS1 Gene Hs.627628

genes like me logo Genes that share expression patterns with DENND5B-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for DENND5B-AS1 Gene

Orthologs for DENND5B-AS1 Gene

Evolution for DENND5B-AS1 Gene

ENSEMBL:
Gene Tree for DENND5B-AS1 (if available)
TreeFam:
Gene Tree for DENND5B-AS1 (if available)

No data available for Orthologs for DENND5B-AS1 Gene

Paralogs for DENND5B-AS1 Gene

No data available for Paralogs for DENND5B-AS1 Gene

Variants for DENND5B-AS1 Gene

Sequence variations from dbSNP and Humsavar for DENND5B-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type
rs574442 -- 31,615,163(+) AGGAT(A/G)TCTGA nc-transcript-variant
rs1269136 -- 31,604,073(+) gagtg(C/T)agtgg intron-variant
rs1677142 -- 31,608,238(+) TAGCT(G/T)CTAGA intron-variant
rs2617188 -- 31,598,618(+) ATTGC(A/G)CCACT intron-variant
rs2682464 -- 31,604,203(-) aaaGA(A/C)CAAGA intron-variant

Relevant External Links for DENND5B-AS1 Gene

HapMap Linkage Disequilibrium report
DENND5B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DENND5B-AS1 Gene

Disorders for DENND5B-AS1 Gene

Relevant External Links for DENND5B-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DENND5B-AS1

No disorders were found for DENND5B-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DENND5B-AS1 Gene

Publications for DENND5B-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3 67

Products for DENND5B-AS1 Gene

Sources for DENND5B-AS1 Gene

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