Aliases for DENND5B-AS1 Gene
Subcategory (RNA class) for DENND5B-AS1 Gene
non-coding RNA
Quality Score for this RNA gene is
3
Aliases for DENND5B-AS1 Gene
External Ids for DENND5B-AS1 Gene
- HGNC: 42517
- Entrez Gene: 100874249
- Ensembl: ENSG00000255867
Previous GeneCards Identifiers for DENND5B-AS1 Gene
- GC00U933706
- GC12P031743
Summaries for DENND5B-AS1 Gene
GeneCards Summary for DENND5B-AS1 Gene
DENND5B-AS1 (DENND5B Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.
Additional gene information for DENND5B-AS1 Gene
No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DENND5B-AS1 Gene
Genomics for DENND5B-AS1 Gene
GeneHancer (GH) Regulatory Elements for DENND5B-AS1 Gene
Promoters and enhancers for DENND5B-AS1 Gene
- Elite GeneHancer and/or Elite GeneHancer-gene association
Download GeneHancer data dump
GeneHancers around DENND5B-AS1 on UCSC Golden Path with GeneCards custom track
Regulatory Element Products
Genomic Locations for DENND5B-AS1 Gene
Genomic Locations for DENND5B-AS1 Gene
- chr12:31,589,923-31,615,666
- (GRCh38/hg38)
- Size:
- 25,744 bases
- Orientation:
- Plus strand
- chr12:31,742,857-31,768,600
- (GRCh37/hg19)
Genomic View for DENND5B-AS1 Gene
Genes around DENND5B-AS1 on UCSC Golden Path with GeneCards custom track
- Cytogenetic band:
-
- 12p11.21 by Ensembl
- 12p11.21 by Entrez Gene
- 12p11.21 by HGNC
DENND5B-AS1 Gene in genomic location: bands according to
Ensembl, locations according to GeneLoc
(and/or Entrez Gene and/or Ensembl if different)
Genomic Neighborhood
• Exon Structure
• Gene Density
RefSeq DNA sequence for DENND5B-AS1 Gene
Proteins for DENND5B-AS1 Gene
Post-translational modifications for DENND5B-AS1 Gene
No Post-translational modifications
Antibody Products
- Search GeneTex for Antibodies for DENND5B-AS1
Protein Products
- Search Origene for Purified Proteins, MassSpec and Protein Over-expression Lysates for DENND5B-AS1
- Origene Custom Protein Services for DENND5B-AS1
- Search GeneTex for Proteins for DENND5B-AS1
No data available for DME Specific Peptides for DENND5B-AS1 Gene
Domains & Families for DENND5B-AS1 Gene
Graphical View of Domain Structure for InterPro Entry
No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DENND5B-AS1 Gene
Function for DENND5B-AS1 Gene
Animal Model Products
- Taconic Biosciences: Generate A Custom CRISPR Mouse Model For Your Study
- Search ViGene Biosciences for DENND5B-AS1
CRISPR Products
- Browse CRISPR knockouts for DENND5B-AS1
- Applied Biological Materials CRISPR for DENND5B-AS1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for DENND5B-AS1
Inhibitory RNA Products
- Search ViGene Biosciences for DENND5B-AS1
Clone Products
- GenScript: Custom all cDNA clones Services for DENND5B-AS1
- Applied Biological Materials Clones for DENND5B-AS1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DENND5B-AS1 Gene
Localization for DENND5B-AS1 Gene
No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DENND5B-AS1 Gene
Transcripts for DENND5B-AS1 Gene
mRNA/cDNA for DENND5B-AS1 Gene
- (1) Additional mRNA sequences :
- (2) Ensembl transcripts including schematic representations, and UCSC links where relevant :
Unigene Clusters for DENND5B-AS1 Gene
CRISPR Products
- Browse CRISPR knockouts for DENND5B-AS1
- Applied Biological Materials CRISPR for DENND5B-AS1
-
Vectors and viruses for KO, Activation, Repression, and more
miRNA Products
- Search ViGene Biosciences for DENND5B-AS1
Inhibitory RNA Products
- Search ViGene Biosciences for DENND5B-AS1
Clone Products
- GenScript: Custom all cDNA clones Services for DENND5B-AS1
- Applied Biological Materials Clones for DENND5B-AS1
-
Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more
Relevant External Links for DENND5B-AS1 Gene
- GeneLoc Exon Structure for
- DENND5B-AS1
- ECgene alternative splicing isoforms for
- DENND5B-AS1
Expression for DENND5B-AS1 Gene
SOURCE GeneReport for Unigene cluster for DENND5B-AS1 Gene:
Hs.627628
Primer Products
No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DENND5B-AS1 Gene
Orthologs for DENND5B-AS1 Gene
Evolution for DENND5B-AS1 Gene
- ENSEMBL:
- Gene Tree for DENND5B-AS1 (if available)
- TreeFam:
- Gene Tree for DENND5B-AS1 (if available)
No data available for Orthologs for DENND5B-AS1 Gene
Paralogs for DENND5B-AS1 Gene
No data available for Paralogs for DENND5B-AS1 Gene
Variants for DENND5B-AS1 Gene
| SNP ID | Clin | Chr 12 pos | Variation | AA Info | Type |
|---|---|---|---|---|---|
| rs1000296949 | -- | 31,600,165(+) | A/G | intron_variant | |
| rs1000325060 | -- | 31,598,372(+) | G/A | intron_variant | |
| rs1000372965 | -- | 31,592,614(+) | G/A | intron_variant | |
| rs1000389123 | -- | 31,588,786(+) | C/T | upstream_transcript_variant | |
| rs1000409809 | -- | 31,614,754(+) | C/T | intron_variant |
| Variant ID | Type | Subtype | PubMed ID |
|---|---|---|---|
| dgv2473n54 | CNV | loss | 21841781 |
| dgv2474n54 | CNV | gain+loss | 21841781 |
| dgv2475n54 | CNV | gain | 21841781 |
| esv2760267 | CNV | gain+loss | 21179565 |
| esv28191 | CNV | loss | 19812545 |
| nsv1070522 | CNV | deletion | 25765185 |
| nsv1119941 | CNV | deletion | 24896259 |
| nsv510291 | OTHER | sequence alteration | 20534489 |
| nsv558088 | CNV | loss | 21841781 |
| nsv558089 | CNV | gain+loss | 21841781 |
| nsv558090 | CNV | gain+loss | 21841781 |
| nsv558092 | CNV | gain | 21841781 |
| nsv558099 | CNV | loss | 21841781 |
| nsv832365 | CNV | loss | 17160897 |
| nsv975472 | CNV | duplication | 23825009 |
| nsv975547 | CNV | duplication | 23825009 |
| nsv983305 | CNV | duplication | 23825009 |
Additional Variant Information for DENND5B-AS1 Gene
- SNPedia medical, phenotypic, and genealogical associations of SNPs for
- DENND5B-AS1
No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DENND5B-AS1 Gene
Disorders for DENND5B-AS1 Gene
Additional Disease Information for DENND5B-AS1
No disorders were found for DENND5B-AS1 Gene.
No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DENND5B-AS1 Gene
Publications for DENND5B-AS1 Gene
- Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
Products for DENND5B-AS1 Gene
- Browse R&D Systems for Antibodies
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- Browse R&D Systems for biochemical assays
- Browse Primary Antibodies
- Browse Proteins and Enzymes
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- Cloud-Clone Corp. disease models service
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- Search GeneTex for Antibodies for DENND5B-AS1
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- Search ViGene Biosciences for DENND5B-AS1
Sources for DENND5B-AS1 Gene
- (1) GeneCards
- (2) HGNC
- (3) EntrezGene
- (4) Swiss-Prot
- (5) Ensembl
- (6) OMIM
- (7) GeneLoc
- (8) Gene Wiki
- (9) UCSC
- (10) PhosphoSitePlus
- (11) GO
- (12) TrEMBL
- (13) InterPro
- (14) ProtoNet
- (15) Blocks
- (16) MGI
- (17) IUBMB
- (18) KEGG
- (19) MINT
- (20) STRING
- (21) IntAct
- (22) Novoseek
- (23) PharmGKB
- (24) DrugBank
- (25) HMDB
- (26) UniGene
- (27) AceView
- (28) ASD
- (29) ECgene
- (30) GeneAnnot
- (31) CGAP SAGE
- (32) SOURCE
- (33) HomoloGene
- (34) PanEnsembl
- (35) euGenes
- (36) SGD
- (37) FlyBase
- (38) WormBase
- (39) Pseudogene
- (40) DGV
- (41) dbSNP
- (42) GenAtlas
- (43) HGMD
- (44) GAD
- (45) BGMUT
- (46) HuGE
- (47) Atlas
- (48) Cell Signaling Technology
- (49) GenBank
- (50) H-invDB
- (51) HORDE
- (52) HUGE
- (53) IMGT
- (54) Leiden
- (55) miRBase
- (56) DME
- (57) OriGene
- (58) PubMed
- (59) R&D Systems
- (60) TGDB
- (61) Tocris
- (62) Abcam
- (63) Novus Biologicals
- (64) ProSpec
- (65) Sino Biological
- (66) GenScript
- (67) Qiagen
- (68) Cloud-Clone Corp.
- (69) OCA
- (70) Proteopedia
- (71) MOPED
- (72) neXtProt
- (73) Reactome
- (74) GeneGo (Thomson Reuters)
- (75) fRNAdb
- (76) DISEASES
- (77) SIMAP
- (78) GenomeRNAi
- (79) LifeMap
- (80) miRTarBase
- (81) MalaCards
- (82) Invitrogen
- (83) BitterDB
- (84) Vector BioLabs
- (85) ESI-BIO
- (86) RefSeq
- (87) BioSystems
- (88) MaxQB
- (89) IUPHAR
- (90) BioGPS
- (91) Illumina
- (92) COMPARTMENTS
- (93) HOMER
- (94) PaxDb
- (95) ApexBio
- (96) Addgene
- (97) antibodies-online
- (98) CYP
- (99) NONCODE
- (100) SwitchGear Genomics
- (101) TreeFam
- (102) PathCards
- (103) GeneReviews
- (104) GeneTex
- (105) Taconic Biosciences
- (106) GTEx
- (107) ProteomicsDB
- (108) SCBT
- (109) DGIdb
- (110) ClinicalTrials
- (111) FDA Approved Drugs
- (112) RVIS
- (113) SIGNOR
- (114) diseasecard
- (115) NIH Rare Diseases
- (116) Orphanet
- (117) UMLS
- (118) GTR
- (119) Disease Ontology
- (120) Genetics Home Reference
- (121) MeSH
- (122) MedlinePlus
- (123) CDC
- (124) NINDS
- (125) NCBI Bookshelf
- (126) ClinVar
- (127) Gene Damage Index
- (128) ViGene Biosciences
- (129) HPO
- (130) UDN
- (131) VISTA
- (132) FANTOM5
- (133) ENCODE
- (134) ProSci
- (135) Horizon
- (136) NURSA
- (137) IID
- (138) Cyagen
- (139) VectorBuilder
- (140) SNPedia
- (141) BRCA Exchange
- (142) St John's Lab
- (143) CIViC
- (144) ProteoGenix
- (145) dbSUPER
- (146) TISSUES
- (147) Gene ORGANizer
- (148) abm
- (149) CrownBio
- (150) Human Protein Atlas
- (151) GWAS Catalog
- (152) Monarch Initiative
- (153) DataMed
- (154) HumanCyc
- (155) genomics-online
- (156) UCNEbase
- (157) EPDnew