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Aliases for DENND5B-AS1 Gene

Subcategory (RNA class) for DENND5B-AS1 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for DENND5B-AS1 Gene

  • DENND5B Antisense RNA 1 2 3
  • DENND5B Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DENND5B-AS1 Gene

ORGUL Members for DENND5B-AS1 Gene

Previous GeneCards Identifiers for DENND5B-AS1 Gene

  • GC00U933706
  • GC12P031743

Summaries for DENND5B-AS1 Gene

GeneCards Summary for DENND5B-AS1 Gene

DENND5B-AS1 (DENND5B Antisense RNA 1) is an RNA Gene, and is affiliated with the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DENND5B-AS1 Gene

Genomics for DENND5B-AS1 Gene

Genomic Location for DENND5B-AS1 Gene

Start:
31,589,923 bp from pter
End:
31,615,666 bp from pter
Size:
25,744 bases
Orientation:
Plus strand

Genomic View for DENND5B-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DENND5B-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DENND5B-AS1 Gene

No data available for Regulatory Elements for DENND5B-AS1 Gene

Proteins for DENND5B-AS1 Gene

Post-translational modifications for DENND5B-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DENND5B-AS1 Gene

Domains for DENND5B-AS1 Gene

Gene Families for DENND5B-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DENND5B-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DENND5B-AS1 Gene

Function for DENND5B-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DENND5B-AS1 Gene

Localization for DENND5B-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DENND5B-AS1 Gene

Pathways for DENND5B-AS1 Gene

SuperPathways for DENND5B-AS1 Gene

No Data Available

Interacting Proteins for DENND5B-AS1 Gene

Gene Ontology (GO) - Biological Process for DENND5B-AS1 Gene

None

No data available for Pathways by source for DENND5B-AS1 Gene

Transcripts for DENND5B-AS1 Gene

mRNA/cDNA for DENND5B-AS1 Gene

(1) Additional mRNA sequences :
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DENND5B-AS1 Gene

DENND5B antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DENND5B-AS1 Gene

No ASD Table

Relevant External Links for DENND5B-AS1 Gene

GeneLoc Exon Structure for
DENND5B-AS1
ECgene alternative splicing isoforms for
DENND5B-AS1

Expression for DENND5B-AS1 Gene

mRNA expression in normal human tissues for DENND5B-AS1 Gene

SOURCE GeneReport for Unigene cluster for DENND5B-AS1 Gene Hs.627628

genes like me logo Genes that share expressions with DENND5B-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for DENND5B-AS1 Gene

Orthologs for DENND5B-AS1 Gene

Evolution for DENND5B-AS1 Gene

ENSEMBL:
Gene Tree for DENND5B-AS1 (if available)
TreeFam:
Gene Tree for DENND5B-AS1 (if available)

No data available for Orthologs for DENND5B-AS1 Gene

Paralogs for DENND5B-AS1 Gene

No data available for Paralogs for DENND5B-AS1 Gene

Variants for DENND5B-AS1 Gene

Sequence variations from dbSNP and Humsavar for DENND5B-AS1 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs574442 -- 31,615,163(+) AGGAT(A/G)TCTGA nc-transcript-variant
rs1259425 -- 31,594,737(+) ATTAG(C/G)TATGT intron-variant
rs1259426 -- 31,595,447(+) cctgc(C/T)tcagt intron-variant
rs1269136 -- 31,604,073(+) gagtg(C/T)agtgg intron-variant
rs1272930 -- 31,604,088(+) atctc(A/G)gctca intron-variant

Relevant External Links for DENND5B-AS1 Gene

HapMap Linkage Disequilibrium report
DENND5B-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for DENND5B-AS1 Gene

Disorders for DENND5B-AS1 Gene

No disorders were found for DENND5B-AS1 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for DENND5B-AS1 Gene

Publications for DENND5B-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for DENND5B-AS1 Gene

Sources for DENND5B-AS1 Gene

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