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Aliases for DEFB110 Gene

Aliases for DEFB110 Gene

  • Defensin Beta 110 2 3 5
  • Defensin, Beta 110 Locus 2 3
  • Defensin, Beta 110 2 4
  • Beta-Defensin 111 3 4
  • Beta-Defensin 10 3 4
  • Beta-Defensin 11 3 4
  • DEFB-10 3 4
  • DEFB-11 3 4
  • DEFB111 3 4
  • Defensin, Beta 111 4
  • Beta-Defensin 110 3
  • Defensin, Beta 10 3
  • DEFB10 4
  • DEFB11 4

External Ids for DEFB110 Gene

Previous GeneCards Identifiers for DEFB110 Gene

  • GC06U990313
  • GC06M050084
  • GC06M049708

Summaries for DEFB110 Gene

Entrez Gene Summary for DEFB110 Gene

  • Defensins form a family of antimicrobial and cytotoxic peptides made by neutrophils. Defensins are short, processed peptide molecules that are classified by structure into three groups: alpha-defensins, beta-defensins and theta-defensins. All beta-defensin genes are densely clustered in four to five syntenic chromosomal regions. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2014]

GeneCards Summary for DEFB110 Gene

DEFB110 (Defensin Beta 110) is a Protein Coding gene. Among its related pathways are Defensins and Innate Immune System.

UniProtKB/Swiss-Prot for DEFB110 Gene

  • Has antibacterial activity.

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFB110 Gene

Genomics for DEFB110 Gene

Regulatory Elements for DEFB110 Gene

Enhancers for DEFB110 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G050030 0.8 ENCODE 0.4 -9.1 -9082 0.2 SOX13 CTCF TFAP4 PKNOX1 ATF1 FOXA2 CBX3 ZNF2 RAD21 GATA2 GC06P050039 DEFB110
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DEFB110 on UCSC Golden Path with GeneCards custom track

Genomic Location for DEFB110 Gene

50,009,138 bp from pter
50,021,981 bp from pter
12,844 bases
Minus strand

Genomic View for DEFB110 Gene

Genes around DEFB110 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEFB110 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEFB110 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB110 Gene

Proteins for DEFB110 Gene

  • Protein details for DEFB110 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Beta-defensin 110
    Protein Accession:
    Secondary Accessions:
    • Q30KR0

    Protein attributes for DEFB110 Gene

    67 amino acids
    Molecular mass:
    8001 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for DEFB110 Gene


neXtProt entry for DEFB110 Gene

Post-translational modifications for DEFB110 Gene

No Post-translational modifications

Other Protein References for DEFB110 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DEFB110 Gene

Domains & Families for DEFB110 Gene

Gene Families for DEFB110 Gene

Protein Domains for DEFB110 Gene


Suggested Antigen Peptide Sequences for DEFB110 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the beta-defensin family.
  • Belongs to the beta-defensin family.
genes like me logo Genes that share domains with DEFB110: view

Function for DEFB110 Gene

Molecular function for DEFB110 Gene

UniProtKB/Swiss-Prot Function:
Has antibacterial activity.

Phenotypes for DEFB110 Gene

GenomeRNAi human phenotypes for DEFB110:
genes like me logo Genes that share phenotypes with DEFB110: view

Animal Model Products

Inhibitory RNA Products

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEFB110 Gene

Localization for DEFB110 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DEFB110 Gene


Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DEFB110 gene
Compartment Confidence
extracellular 5

Gene Ontology (GO) - Cellular Components for DEFB110 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with DEFB110: view

Pathways & Interactions for DEFB110 Gene

genes like me logo Genes that share pathways with DEFB110: view

Pathways by source for DEFB110 Gene

Gene Ontology (GO) - Biological Process for DEFB110 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006952 defense response IEA --
GO:0042742 defense response to bacterium IBA,IEA --
GO:0045087 innate immune response IBA --
genes like me logo Genes that share ontologies with DEFB110: view

No data available for SIGNOR curated interactions for DEFB110 Gene

Drugs & Compounds for DEFB110 Gene

No Compound Related Data Available

Transcripts for DEFB110 Gene

mRNA/cDNA for DEFB110 Gene

(2) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DEFB110 Gene

Defensin, beta 110 locus:
Representative Sequences:

Inhibitory RNA Products

Alternative Splicing Database (ASD) splice patterns (SP) for DEFB110 Gene

No ASD Table

Relevant External Links for DEFB110 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for DEFB110 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DEFB110 Gene

NURSA nuclear receptor signaling pathways regulating expression of DEFB110 Gene:


SOURCE GeneReport for Unigene cluster for DEFB110 Gene:

genes like me logo Genes that share expression patterns with DEFB110: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DEFB110 Gene

Orthologs for DEFB110 Gene

This gene was present in the common ancestor of mammals.

Orthologs for DEFB110 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia DEFB110 34 35
  • 98.01 (n)
(Canis familiaris)
Mammalia DEFB110 34
  • 87.56 (n)
CBD111 35
  • 78 (a)
(Rattus norvegicus)
Mammalia Defb17 34
  • 83.59 (n)
(Bos Taurus)
Mammalia DEFB110 34
  • 83.08 (n)
(Mus musculus)
Mammalia Gm15386 35
  • 69 (a)
Species where no ortholog for DEFB110 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for DEFB110 Gene

Gene Tree for DEFB110 (if available)
Gene Tree for DEFB110 (if available)

Paralogs for DEFB110 Gene

(6) SIMAP similar genes for DEFB110 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DEFB110: view

No data available for Paralogs for DEFB110 Gene

Variants for DEFB110 Gene

Sequence variations from dbSNP and Humsavar for DEFB110 Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs1000331450 -- 50,022,509(+) TGTCT(C/T)TTTTT upstream-variant-2KB
rs1000434797 -- 50,011,819(+) TGGAA(G/T)ATATT intron-variant
rs1000811934 -- 50,023,575(+) TTCAT(C/T)CTATA upstream-variant-2KB
rs1000843558 -- 50,019,610(+) TCCCC(C/T)GAATA intron-variant
rs1001073302 -- 50,021,005(+) TGTCT(C/T)ATTTC intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DEFB110 Gene

Variant ID Type Subtype PubMed ID
nsv5295 CNV deletion 18451855

Variation tolerance for DEFB110 Gene

Residual Variation Intolerance Score: 55.2% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 0.18; 4.15% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for DEFB110 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DEFB110 Gene

Disorders for DEFB110 Gene

Relevant External Links for DEFB110

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for DEFB110 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DEFB110 Gene

Publications for DEFB110 Gene

  1. Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract. (PMID: 16033865) Patil A.A. … Zhang G. (Physiol. Genomics 2005) 2 3 4 64
  2. Discovery of five conserved beta-defensin gene clusters using a computational search strategy. (PMID: 11854508) Schutte B.C. … McCray P.B. Jr. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3 64
  3. The DNA sequence and analysis of human chromosome 6. (PMID: 14574404) Mungall A.J. … Beck S. (Nature 2003) 4 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DEFB110 Gene

Sources for DEFB110 Gene

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