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Aliases for DEFB109P1 Gene

Aliases for DEFB109P1 Gene

  • Defensin Beta 109 Pseudogene 1 2 3 5
  • Defensin, Beta 109, Pseudogene 1 2 3
  • Defensin, Beta 109 2 4
  • DEFB109A 3 4
  • DEFB109 3 4
  • Defensin, Beta 109, Pseudogene 1/1B 4
  • Defensin, Beta 9 Pseudogene 3
  • DEFB109P1 DEFB109P1B 4
  • DEFB-9 3

External Ids for DEFB109P1 Gene

Previous HGNC Symbols for DEFB109P1 Gene

  • DEFB109

Previous GeneCards Identifiers for DEFB109P1 Gene

  • GC08U900543
  • GC08M007887
  • GC08M007847
  • GC08M012251
  • GC08M012253

Summaries for DEFB109P1 Gene

GeneCards Summary for DEFB109P1 Gene

DEFB109P1 (Defensin Beta 109 Pseudogene 1) is a Pseudogene. Among its related pathways are Immune System and Defensins.

UniProtKB/Swiss-Prot for DEFB109P1 Gene

  • Has antibacterial activity.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFB109P1 Gene

Genomics for DEFB109P1 Gene

Regulatory Elements for DEFB109P1 Gene

Enhancers for DEFB109P1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around DEFB109P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DEFB109P1 Gene

12,393,209 bp from pter
12,400,366 bp from pter
7,158 bases
Minus strand

Genomic View for DEFB109P1 Gene

Genes around DEFB109P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEFB109P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEFB109P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB109P1 Gene

Proteins for DEFB109P1 Gene

  • Protein details for DEFB109P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Beta-defensin 109
    Protein Accession:

    Protein attributes for DEFB109P1 Gene

    87 amino acids
    Molecular mass:
    9886 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DEFB109P1 Gene

Proteomics data for DEFB109P1 Gene at MOPED

Post-translational modifications for DEFB109P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFB109P1 Gene

Domains & Families for DEFB109P1 Gene

Gene Families for DEFB109P1 Gene

Protein Domains for DEFB109P1 Gene

Graphical View of Domain Structure for InterPro Entry



  • Belongs to the beta-defensin family.
  • Belongs to the beta-defensin family.
genes like me logo Genes that share domains with DEFB109P1: view

No data available for Suggested Antigen Peptide Sequences for DEFB109P1 Gene

Function for DEFB109P1 Gene

Molecular function for DEFB109P1 Gene

UniProtKB/Swiss-Prot Function:
Has antibacterial activity.

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEFB109P1 Gene

Localization for DEFB109P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DEFB109P1 Gene

No data available for Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DEFB109P1 Gene

Pathways & Interactions for DEFB109P1 Gene

SuperPathways for DEFB109P1 Gene

Superpath Contained pathways
1 Defensins
2 Immune System
genes like me logo Genes that share pathways with DEFB109P1: view

Pathways by source for DEFB109P1 Gene

4 Reactome pathways for DEFB109P1 Gene

Interacting Proteins for DEFB109P1 Gene

Gene Ontology (GO) - Biological Process for DEFB109P1 Gene


No data available for SIGNOR curated interactions for DEFB109P1 Gene

Drugs & Compounds for DEFB109P1 Gene

No Compound Related Data Available

Transcripts for DEFB109P1 Gene

mRNA/cDNA for DEFB109P1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DEFB109P1 Gene

Defensin, beta 109, pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DEFB109P1 Gene

No ASD Table

Relevant External Links for DEFB109P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for DEFB109P1 Gene

mRNA expression in normal human tissues for DEFB109P1 Gene

mRNA differential expression in normal tissues according to GTEx for DEFB109P1 Gene

This gene is overexpressed in Testis (x5.2).

SOURCE GeneReport for Unigene cluster for DEFB109P1 Gene Hs.721640

genes like me logo Genes that share expression patterns with DEFB109P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for DEFB109P1 Gene

Orthologs for DEFB109P1 Gene

Evolution for DEFB109P1 Gene

Gene Tree for DEFB109P1 (if available)
Gene Tree for DEFB109P1 (if available)

No data available for Orthologs for DEFB109P1 Gene

Paralogs for DEFB109P1 Gene

(4) SIMAP similar genes for DEFB109P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DEFB109P1: view

No data available for Paralogs for DEFB109P1 Gene

Variants for DEFB109P1 Gene

Structural Variations from Database of Genomic Variants (DGV) for DEFB109P1 Gene

Variant ID Type Subtype PubMed ID
nsv516685 CNV Gain+Loss 19592680
nsv428195 CNV Gain 18775914
dgv2199e1 CNV Complex 17122850
dgv2200e1 CNV Complex 17122850
esv2736614 CNV Deletion 23290073
dgv1270e199 CNV Deletion 23128226
dgv244e55 CNV Gain 17911159
nsv890374 CNV Gain 21882294
nsv8288 CNV Gain+Loss 18304495
dgv2203e1 CNV Complex 17122850
dgv2204e1 CNV Complex 17122850
nsv821657 CNV Loss 15273396
esv25198 CNV Gain+Loss 19812545
nsv831234 CNV Loss 17160897
nsv890378 CNV Gain+Loss 21882294
nsv890380 CNV Gain 21882294
dgv2207e1 CNV Complex 17122850
nsv469553 CNV Loss 16826518
nsv471652 CNV Gain+Loss 15918152
esv2672709 CNV Deletion 23128226
nsv890381 CNV Gain 21882294
dgv7706n71 CNV Gain 21882294
dgv2209e1 CNV Complex 17122850
dgv245e55 CNV Gain 17911159
dgv2210e1 CNV Complex 17122850
dgv246e55 CNV Gain 17911159
nsv831235 CNV Loss 17160897
dgv140n17 CNV Loss 16327808
nsv511387 CNV Loss 21212237

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Variation tolerance and Relevant External Links for DEFB109P1 Gene

Disorders for DEFB109P1 Gene

Relevant External Links for DEFB109P1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for DEFB109P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DEFB109P1 Gene

Publications for DEFB109P1 Gene

  1. Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract. (PMID: 16033865) Patil A.A. … Zhang G. (Physiol. Genomics 2005) 3 4 67
  2. Discovery of five conserved beta-defensin gene clusters using a computational search strategy. (PMID: 11854508) Schutte B.C. … McCray P.B. Jr. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  3. ORFeome-based search of airway epithelial cell-specific novel human beta-defensin genes. (PMID: 12600824) Kao C.Y. … Wu R. (Am. J. Respir. Cell Mol. Biol. 2003) 3
  4. Duplication and selection in the evolution of primate beta-defensin genes. (PMID: 12734011) Semple C.A.M. … Dorin J.R. (Genome Biol. 2003) 3

Products for DEFB109P1 Gene

Sources for DEFB109P1 Gene