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Aliases for DEFB109P1 Gene

Aliases for DEFB109P1 Gene

  • Defensin, Beta 109, Pseudogene 1 2 3
  • Defensin, Beta 109 2 4
  • DEFB109A 3 4
  • DEFB109 3 4
  • Defensin, Beta 109, Pseudogene 1/1B 4
  • Defensin, Beta 9 Pseudogene 3
  • DEFB109P1 DEFB109P1B 4
  • DEFB-9 3

External Ids for DEFB109P1 Gene

Previous HGNC Symbols for DEFB109P1 Gene

  • DEFB109

Previous GeneCards Identifiers for DEFB109P1 Gene

  • GC08U900543
  • GC08M007887
  • GC08M007847
  • GC08M012251
  • GC08M012253

Summaries for DEFB109P1 Gene

GeneCards Summary for DEFB109P1 Gene

DEFB109P1 (Defensin, Beta 109, Pseudogene 1) is a Pseudogene.

UniProtKB/Swiss-Prot for DEFB109P1 Gene

  • Has antibacterial activity.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFB109P1 Gene

Genomics for DEFB109P1 Gene

Regulatory Elements for DEFB109P1 Gene

Genomic Location for DEFB109P1 Gene

12,393,209 bp from pter
12,400,366 bp from pter
7,158 bases
Minus strand

Genomic View for DEFB109P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DEFB109P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB109P1 Gene

Proteins for DEFB109P1 Gene

  • Protein details for DEFB109P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Beta-defensin 109
    Protein Accession:
    Secondary Accessions:

    Protein attributes for DEFB109P1 Gene

    87 amino acids
    Molecular mass:
    9886 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DEFB109P1 Gene

Proteomics data for DEFB109P1 Gene at MOPED

Post-translational modifications for DEFB109P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFB109P1 Gene

Domains for DEFB109P1 Gene

Gene Families for DEFB109P1 Gene

  • DEFB :Defensins, beta

Protein Domains for DEFB109P1 Gene

Graphical View of Domain Structure for InterPro Entry



  • Q30KR1
  • Belongs to the beta-defensin family.
genes like me logo Genes that share domains with DEFB109P1: view

No data available for Suggested Antigen Peptide Sequences for DEFB109P1 Gene

Function for DEFB109P1 Gene

Molecular function for DEFB109P1 Gene

UniProtKB/Swiss-Prot Function:
Has antibacterial activity.

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DEFB109P1 Gene

Localization for DEFB109P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DEFB109P1 Gene


Gene Ontology (GO) - Cellular Components for DEFB109P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with DEFB109P1: view

No data available for Subcellular locations from COMPARTMENTS for DEFB109P1 Gene

Pathways for DEFB109P1 Gene

SuperPathways for DEFB109P1 Gene

No Data Available

Interacting Proteins for DEFB109P1 Gene

Gene Ontology (GO) - Biological Process for DEFB109P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0042742 defense response to bacterium IEA --
genes like me logo Genes that share ontologies with DEFB109P1: view

No data available for Pathways by source for DEFB109P1 Gene

Transcripts for DEFB109P1 Gene

mRNA/cDNA for DEFB109P1 Gene

(4) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DEFB109P1 Gene

Defensin, beta 109, pseudogene 1:
Representative Sequences:

miRNA Products

  • QIAGEN qRT-PCR Assays for microRNAs that regulate DEFB109P1
    • Block miRNA regulation of DEFB109P1 using miScript Target Protectors

    Inhibitory RNA Products

    • Predesigned siRNA for gene silencing in human,mouse,rat for DEFB109P1

    Primer Products

    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat

    Flow Cytometry Products

    Alternative Splicing Database (ASD) splice patterns (SP) for DEFB109P1 Gene

    No ASD Table

    Relevant External Links for DEFB109P1 Gene

    GeneLoc Exon Structure for
    ECgene alternative splicing isoforms for

    Expression for DEFB109P1 Gene

    mRNA expression in normal human tissues for DEFB109P1 Gene

    mRNA differential expression in normal tissues according to GTEx for DEFB109P1 Gene

    This gene is overexpressed in Testis (5.2).

    SOURCE GeneReport for Unigene cluster for DEFB109P1 Gene Hs.721640

    genes like me logo Genes that share expressions with DEFB109P1: view

    In Situ Assay Products

    No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for DEFB109P1 Gene

    Orthologs for DEFB109P1 Gene

    Evolution for DEFB109P1 Gene

    Gene Tree for DEFB109P1 (if available)
    Gene Tree for DEFB109P1 (if available)

    No data available for Orthologs for DEFB109P1 Gene

    Paralogs for DEFB109P1 Gene

    Selected SIMAP similar genes for DEFB109P1 Gene using alignment to 1 proteins:

    genes like me logo Genes that share paralogs with DEFB109P1: view

    No data available for Paralogs for DEFB109P1 Gene

    Variants for DEFB109P1 Gene

    Structural Variations from Database of Genomic Variants (DGV) for DEFB109P1 Gene

    Variant ID Type Subtype PubMed ID
    nsv516685 CNV Gain+Loss 19592680
    nsv428195 CNV Gain 18775914
    dgv2199e1 CNV Complex 17122850
    dgv2200e1 CNV Complex 17122850
    esv2736614 CNV Deletion 23290073
    dgv1270e199 CNV Deletion 23128226
    dgv244e55 CNV Gain 17911159
    nsv890374 CNV Gain 21882294
    nsv8288 CNV Gain+Loss 18304495
    dgv2203e1 CNV Complex 17122850
    dgv2204e1 CNV Complex 17122850
    nsv821657 CNV Loss 15273396
    esv25198 CNV Gain+Loss 19812545
    nsv831234 CNV Loss 17160897
    nsv890378 CNV Gain+Loss 21882294
    nsv890380 CNV Gain 21882294
    dgv2207e1 CNV Complex 17122850
    nsv469553 CNV Loss 16826518
    nsv471652 CNV Gain+Loss 15918152
    esv2672709 CNV Deletion 23128226
    nsv890381 CNV Gain 21882294
    dgv7706n71 CNV Gain 21882294
    dgv2209e1 CNV Complex 17122850
    dgv245e55 CNV Gain 17911159
    dgv2210e1 CNV Complex 17122850
    dgv246e55 CNV Gain 17911159
    nsv831235 CNV Loss 17160897
    dgv140n17 CNV Loss 16327808
    nsv511387 CNV Loss 21212237

    Relevant External Links for DEFB109P1 Gene

    HapMap Linkage Disequilibrium report

    No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Sequence variations from dbSNP and Humsavar for DEFB109P1 Gene

    Disorders for DEFB109P1 Gene

    No disorders were found for DEFB109P1 Gene.

    No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for DEFB109P1 Gene

    Publications for DEFB109P1 Gene

    1. Discovery of five conserved beta-defensin gene clusters using a computational search strategy. (PMID: 11854508) Schutte B.C. … McCray P.B. Jr. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
    2. Cross-species analysis of the mammalian beta-defensin gene family: presence of syntenic gene clusters and preferential expression in the male reproductive tract. (PMID: 16033865) Patil A.A. … Zhang G. (Physiol. Genomics 2005) 3 4
    3. ORFeome-based search of airway epithelial cell-specific novel human beta-defensin genes. (PMID: 12600824) Kao C.Y. … Wu R. (Am. J. Respir. Cell Mol. Biol. 2003) 3
    4. Duplication and selection in the evolution of primate beta-defensin genes. (PMID: 12734011) Semple C.A.M. … Dorin J.R. (Genome Biol. 2003) 3

    Products for DEFB109P1 Gene

    Sources for DEFB109P1 Gene

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