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Aliases for DEFB108P1 Gene

Aliases for DEFB108P1 Gene

  • Defensin, Beta 108, Pseudogene 1 2 3
  • DEFB108A 3 4
  • Putative Beta-Defensin 108B Pseudogene 1/2 4
  • Defensin, Beta 108A 4
  • DEFB108P1 DEFB108P2 4
  • Defensin, Beta 108 2
  • DEFB108 3
  • DEFB-8 3

External Ids for DEFB108P1 Gene

Previous HGNC Symbols for DEFB108P1 Gene

  • DEFB108

Previous GeneCards Identifiers for DEFB108P1 Gene

  • GC08U900559
  • GC08M007829
  • GC08M007791

Summaries for DEFB108P1 Gene

GeneCards Summary for DEFB108P1 Gene

DEFB108P1 (Defensin, Beta 108, Pseudogene 1) is a Pseudogene.

UniProtKB/Swiss-Prot for DEFB108P1 Gene

  • Has antibacterial activity.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFB108P1 Gene

Genomics for DEFB108P1 Gene

Genomic Location for DEFB108P1 Gene

Start:
7,934,412 bp from pter
End:
7,938,770 bp from pter
Size:
4,359 bases
Orientation:
Minus strand

Genomic View for DEFB108P1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DEFB108P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB108P1 Gene

No data available for Regulatory Elements for DEFB108P1 Gene

Proteins for DEFB108P1 Gene

  • Protein details for DEFB108P1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    A8MXU0-D108A_HUMAN
    Recommended name:
    Putative beta-defensin 108A
    Protein Accession:
    A8MXU0
    Secondary Accessions:

    Protein attributes for DEFB108P1 Gene

    Size:
    73 amino acids
    Molecular mass:
    8390 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DEFB108P1 Gene

Proteomics data for DEFB108P1 Gene at MOPED

Post-translational modifications for DEFB108P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFB108P1 Gene

Domains for DEFB108P1 Gene

Gene Families for DEFB108P1 Gene

HGNC:
  • DEFB :Defensins, beta

Protein Domains for DEFB108P1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for DEFB108P1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

A8MXU0

UniProtKB/Swiss-Prot:

D108A_HUMAN :
  • A8MXU0
Family:
  • Belongs to the beta-defensin family.
genes like me logo Genes that share domains with DEFB108P1: view

Function for DEFB108P1 Gene

Molecular function for DEFB108P1 Gene

UniProtKB/Swiss-Prot Function: Has antibacterial activity.

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DEFB108P1 Gene

Localization for DEFB108P1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DEFB108P1 Gene

Secreted.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DEFB108P1 Gene COMPARTMENTS Subcellular localization image for DEFB108P1 gene
Compartment Confidence
extracellular 3

Gene Ontology (GO) - Cellular Components for DEFB108P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region IEA --
genes like me logo Genes that share ontologies with DEFB108P1: view

Pathways for DEFB108P1 Gene

SuperPathways for DEFB108P1 Gene

No Data Available

Interacting Proteins for DEFB108P1 Gene

Gene Ontology (GO) - Biological Process for DEFB108P1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0042742 defense response to bacterium IEA --
genes like me logo Genes that share ontologies with DEFB108P1: view

No data available for Pathways by source for DEFB108P1 Gene

Transcripts for DEFB108P1 Gene

mRNA/cDNA for DEFB108P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DEFB108P1 Gene

No ASD Table

Relevant External Links for DEFB108P1 Gene

GeneLoc Exon Structure for
DEFB108P1
ECgene alternative splicing isoforms for
DEFB108P1

Expression for DEFB108P1 Gene

mRNA expression in normal human tissues for DEFB108P1 Gene

genes like me logo Genes that share expressions with DEFB108P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for DEFB108P1 Gene

Orthologs for DEFB108P1 Gene

Evolution for DEFB108P1 Gene

ENSEMBL:
Gene Tree for DEFB108P1 (if available)
TreeFam:
Gene Tree for DEFB108P1 (if available)

No data available for Orthologs for DEFB108P1 Gene

Paralogs for DEFB108P1 Gene

Selected SIMAP similar genes for DEFB108P1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DEFB108P1: view

No data available for Paralogs for DEFB108P1 Gene

Variants for DEFB108P1 Gene

Relevant External Links for DEFB108P1 Gene

HapMap Linkage Disequilibrium report
DEFB108P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for DEFB108P1 Gene

Disorders for DEFB108P1 Gene

No disorders were found for DEFB108P1 Gene.

No data available for UniProtKB/Swiss-Prot for DEFB108P1 Gene

Publications for DEFB108P1 Gene

  1. Discovery of five conserved beta-defensin gene clusters using a computational search strategy. (PMID: 11854508) Schutte B.C. … McCray P.B. Jr. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Duplication and selection in the evolution of primate beta-defensin genes. (PMID: 12734011) Semple C.A.M. … Dorin J.R. (Genome Biol. 2003) 3 4
  3. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 4

Products for DEFB108P1 Gene

Sources for DEFB108P1 Gene

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