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Aliases for DEFB108C Gene

Aliases for DEFB108C Gene

  • Defensin Beta 108C 2 3
  • Defensin Beta 108 Pseudogene 2 2 3 5
  • DEFB108P2 3 5
  • Defensin, Beta 108, Pseudogene 2 2

External Ids for DEFB108C Gene

Previous HGNC Symbols for DEFB108C Gene

  • DEFB108P2

Summaries for DEFB108C Gene

GeneCards Summary for DEFB108C Gene

DEFB108C (Defensin Beta 108C) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFB108C Gene

Genomics for DEFB108C Gene

Regulatory Elements for DEFB108C Gene

Enhancers for DEFB108C Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08G007354 0.9 ENCODE 0.4 -17.6 -17641 1.1 RB1 ZNF76 KLF17 ZNF2 RAD21 GLIS2 ZNF143 ZNF207 EGR2 ZNF202 FAM66B DEFB108C
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DEFB108C on UCSC Golden Path with GeneCards custom track

Genomic Location for DEFB108C Gene

Chromosome:
8
Start:
7,373,114 bp from pter
End:
7,377,500 bp from pter
Size:
4,387 bases
Orientation:
Plus strand

Genomic View for DEFB108C Gene

Genes around DEFB108C on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DEFB108C Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DEFB108C Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFB108C Gene

Proteins for DEFB108C Gene

Post-translational modifications for DEFB108C Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFB108C Gene

Domains & Families for DEFB108C Gene

Gene Families for DEFB108C Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DEFB108C: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DEFB108C Gene

Function for DEFB108C Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DEFB108C Gene

Localization for DEFB108C Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DEFB108C Gene

Pathways & Interactions for DEFB108C Gene

SuperPathways for DEFB108C Gene

No Data Available

Interacting Proteins for DEFB108C Gene

Gene Ontology (GO) - Biological Process for DEFB108C Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DEFB108C Gene

Transcripts for DEFB108C Gene

mRNA/cDNA for DEFB108C Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DEFB108C Gene

No ASD Table

Relevant External Links for DEFB108C Gene

GeneLoc Exon Structure for
DEFB108C
ECgene alternative splicing isoforms for
DEFB108C

Expression for DEFB108C Gene

NURSA nuclear receptor signaling pathways regulating expression of DEFB108C Gene:

DEFB108C
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DEFB108C Gene

Orthologs for DEFB108C Gene

Evolution for DEFB108C Gene

ENSEMBL:
Gene Tree for DEFB108C (if available)
TreeFam:
Gene Tree for DEFB108C (if available)

No data available for Orthologs for DEFB108C Gene

Paralogs for DEFB108C Gene

No data available for Paralogs for DEFB108C Gene

Variants for DEFB108C Gene

Relevant External Links for DEFB108C Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DEFB108C

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DEFB108C Gene

Disorders for DEFB108C Gene

Relevant External Links for DEFB108C

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DEFB108C

No disorders were found for DEFB108C Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DEFB108C Gene

Publications for DEFB108C Gene

  1. Narrowing down the distal border of the copy number variable beta-defensin gene cluster on human 8p23. (PMID: 24552181) Taudien S. … Platzer M. (BMC Res Notes 2014) 3 64
  2. DNA sequence and analysis of human chromosome 8. (PMID: 16421571) Nusbaum C. … Lander E.S. (Nature 2006) 3 64
  3. Duplication and selection in the evolution of primate beta-defensin genes. (PMID: 12734011) Semple C.A.M. … Dorin J.R. (Genome Biol. 2003) 3 64
  4. Discovery of five conserved beta-defensin gene clusters using a computational search strategy. (PMID: 11854508) Schutte B.C. … McCray P.B. Jr. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DEFB108C Gene

Sources for DEFB108C Gene

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