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Aliases for DEFA9P Gene

Aliases for DEFA9P Gene

  • Defensin, Alpha 9 Pseudogene 2 3
  • DEFAP2 3

External Ids for DEFA9P Gene

Summaries for DEFA9P Gene

GeneCards Summary for DEFA9P Gene

DEFA9P (Defensin, Alpha 9 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DEFA9P Gene

Genomics for DEFA9P Gene

Genomic Location for DEFA9P Gene

Start:
6,959,289 bp from pter
End:
6,960,161 bp from pter
Size:
873 bases
Orientation:
Minus strand

Genomic View for DEFA9P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DEFA9P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DEFA9P Gene

No data available for Regulatory Elements for DEFA9P Gene

Proteins for DEFA9P Gene

Post-translational modifications for DEFA9P Gene

No Post-translational modifications

No data available for DME Specific Peptides for DEFA9P Gene

Domains for DEFA9P Gene

Gene Families for DEFA9P Gene

HGNC:
  • DEFA :Defensins, alpha
genes like me logo Genes that share domains with DEFA9P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for DEFA9P Gene

Function for DEFA9P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DEFA9P Gene

Localization for DEFA9P Gene

No data available for Gene Ontology (GO) - Cellular Components for DEFA9P Gene

Pathways for DEFA9P Gene

SuperPathways for DEFA9P Gene

No Data Available

Interacting Proteins for DEFA9P Gene

Gene Ontology (GO) - Biological Process for DEFA9P Gene

None

No data available for Pathways by source for DEFA9P Gene

Transcripts for DEFA9P Gene

mRNA/cDNA for DEFA9P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DEFA9P Gene

No ASD Table

Relevant External Links for DEFA9P Gene

GeneLoc Exon Structure for
DEFA9P
ECgene alternative splicing isoforms for
DEFA9P

Expression for DEFA9P Gene

mRNA expression in normal human tissues for DEFA9P Gene

SOURCE GeneReport for Unigene cluster for DEFA9P Gene Hs.552565

genes like me logo Genes that share expressions with DEFA9P: view

Orthologs for DEFA9P Gene

Evolution for DEFA9P Gene

ENSEMBL:
Gene Tree for DEFA9P (if available)
TreeFam:
Gene Tree for DEFA9P (if available)

No data available for Orthologs for DEFA9P Gene

Paralogs for DEFA9P Gene

No data available for Paralogs for DEFA9P Gene

Variants for DEFA9P Gene

Sequence variations from dbSNP and Humsavar for DEFA9P Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type MAF
rs1076577 -- 6,959,236(-) GAAGA(C/T)AACTT downstream-variant-500B
rs2702853 -- 6,961,869(+) gaagc(A/T)gatct upstream-variant-2KB
rs2738067 -- 6,961,253(-) ACTTA(C/T)GGGCA upstream-variant-2KB
rs2738068 -- 6,960,955(-) ACAGA(C/T)GGGAG upstream-variant-2KB
rs2738069 -- 6,960,814(-) TAATG(A/G)TAGAA upstream-variant-2KB

Relevant External Links for DEFA9P Gene

HapMap Linkage Disequilibrium report
DEFA9P

No data available for Structural Variations from Database of Genomic Variants (DGV) for DEFA9P Gene

Disorders for DEFA9P Gene

Relevant External Links for DEFA9P

Genetic Association Database (GAD)
DEFA9P
genes like me logo Genes that share disorders with DEFA9P: view

No data available for UniProtKB/Swiss-Prot for DEFA9P Gene

Publications for DEFA9P Gene

  1. Rapid evolution and diversification of mammalian alpha-defensins as revealed by comparative analysis of rodent and primate genes. (PMID: 15494476) Patil A. … Zhang G. (Physiol. Genomics 2004) 2 3
  2. Polymorphic segmental duplications at 8p23.1 challenge the determination of individual defensin gene repertoires and the assembly of a contiguous human reference sequence. (PMID: 15588320) Taudien S. … Platzer M. (BMC Genomics 2004) 2 3
  3. A genome-wide association study in Han Chinese identifies multiple susceptibility loci for IgA nephropathy. (PMID: 22197929) Yu X.Q. … Liu J.J. (Nat. Genet. 2012) 49

Products for DEFA9P Gene

Sources for DEFA9P Gene

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