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DDX55 Gene

protein-coding   GIFtS: 52
GCID: GC12P124086

DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 55

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(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, 10fRNAdb, 12H-InvDB, 13NCBI, 14NONCODE, and/or 15RNAdb)
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Aliases
DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 551 2
DEAD Box Protein 552 3
ATP-Dependent RNA Helicase DDX552
EC 3.6.4.133
KIAA15953
EC 3.6.18

External Ids:    HGNC: 200851   Entrez Gene: 576962   Ensembl: ENSG000001113647   UniProtKB: Q8NHQ93   

Export aliases for DDX55 gene to outside databases

Previous GC identifers: GC12P123810 GC12P122439 GC12P122611 GC12P121048


(According to Entrez Gene, GeneCards, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
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Entrez Gene summary for DDX55 Gene:
This gene encodes a member of the DEAD box protein family. DEAD box proteins, characterized by the conserved motif
Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They are implicated in a number of cellular processes
involving alteration of RNA secondary structure, such as translation initiation, nuclear and mitochondrial
splicing, and ribosome and spliceosome assembly. Based on their distribution patterns, some members of this
family are believed to be involved in embryogenesis, spermatogenesis, and cellular growth and division. Multiple
alternatively spliced transcript variants have been found for this gene, but the biological validity of only one
transcript has been confirmed. (provided by RefSeq, Jul 2008)

GeneCards Summary for DDX55 Gene:
DDX55 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 55) is a protein-coding gene. GO annotations related to this gene include RNA binding and ATP-dependent helicase activity.

UniProtKB/Swiss-Prot: DDX55_HUMAN, Q8NHQ9
Function: Probable ATP-binding RNA helicase




(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 75), Regulatory elements and Epigenetics data according to QIAGEN, and/or SwitchGear Genomics)
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RefSeq DNA sequence at NCBI GenBank:
NC_000012.11  NT_029419.13  NC_018923.2  
Regulatory elements:
   Regulatory transcription factor binding sites in the DDX55 gene promoter:
         STAT5B   FOXO3   MIF-1   FOXL1   FOXO3b   SRY   FOXO1a   FOXO3a   MRF-2   FOXO1   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidDDX55 promoter sequence
   Search Chromatin IP Primers for DDX55

Epigenetics:
DNA Methylation CpG Assay Predesigned for Pyrosequencing in human, mouse, rat DDX55


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q24.31   Ensembl cytogenetic band:  12q24.31   HGNC cytogenetic band: 12q24.31

DDX55 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
DDX55 gene location

GeneLoc information about chromosome 12         GeneLoc Exon Structure

GeneLoc location for GC12P124086:  view genomic region     (about GC identifiers)

Start:
124,086,624 bp from pter      End:
124,105,488 bp from pter
Size:
18,865 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, 2neXtProt, Ensembl, and/or Reactome, Modification sites according to PhosphoSitePlus, Specific Peptides from DME, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, Cloud-Clone Corp., and/or eBioscience,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, Cloud-Clone Corp., and/or eBioscience, Antibodies by EMD Millipore, R&D Systems, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, LSBio, Abcam, Cloud-Clone Corp, and/or others.)
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UniProtKB/Swiss-Prot: DDX55_HUMAN, Q8NHQ9 (See protein sequence)
Recommended Name: ATP-dependent RNA helicase DDX55  
Size: 600 amino acids; 68547 Da
Secondary accessions: Q658L6 Q9HCH7

Explore the universe of human proteins at neXtProt for DDX55: NX_Q8NHQ9

Explore proteomics data for DDX55 at MOPED

Post-translational modifications: 

  • Modification sites at neXtProt
  • Modification sites at PhosphoSitePlus
  • Selected DME Specific Peptides for DDX55 (Q8NHQ9) (see all 17)
     TPTRELA  VATPGRL  DEADRLL  GLRNPVR 


    See DDX55 Protein Expression from SPIRE MOPED, PaxDB, and MaxQB

    REFSEQ proteins: NP_065987.1  
    ENSEMBL proteins: 
     ENSP00000238146   ENSP00000442823   ENSP00000446255   ENSP00000443114   ENSP00000346244  
     ENSP00000442332  

    DDX55 Human Recombinant Protein Products:

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    Novus Biologicals DDX55 Protein
    Novus Biologicals DDX55 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse Sino Biological Cell Lysates
    Browse ProSpec Recombinant Proteins
    Cloud-Clone Corp. Proteins for DDX55

     
    Search eBioscience for Proteins for DDX55 

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    (According to HGNC, IUPHAR, InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
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    HGNC Gene Families:
    DDX: DEAD-boxes

    Selected InterPro protein domains (see all 7):
     IPR011545 DNA/RNA_helicase_DEAD/DEAH_N
     IPR000629 RNA-helicase_DEAD-box_CS
     IPR025313 DUF4217
     IPR027417 P-loop_NTPase
     IPR014014 RNA_helicase_DEAD_Q_motif

    Graphical View of Domain Structure for InterPro Entry Q8NHQ9

    ProtoNet protein and cluster: Q8NHQ9

    1 Blocks protein domain: IPB000629 ATP-dependent helicase

    UniProtKB/Swiss-Prot: DDX55_HUMAN, Q8NHQ9
    Domain: The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP
    binding and hydrolysis
    Similarity: Belongs to the DEAD box helicase family. DDX55/SPB4 subfamily
    Similarity: Contains 1 helicase ATP-binding domain
    Similarity: Contains 1 helicase C-terminal domain


    Find genes that share domains with DDX55           About GenesLikeMe


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory, genOway,
    transcription factor targeting from QIAGEN and/or HOMER, miRNA Gene Targets from miRTarBase, shRNA from OriGene, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, SwitchGear Genomics, Gene Editing from DNA2.0, Clones from OriGene, GenScript, Sino Biological, DNA2.0, Vector BioLabs and/or Addgene, Cell Lines from GenScript, ESI BIO, In Situ Hybridization Assays from Advanced Cell Diagnostics, Flow cytometry from eBioscience, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Molecular Function:

         UniProtKB/Swiss-Prot Summary: DDX55_HUMAN, Q8NHQ9
    Function: Probable ATP-binding RNA helicase
    Catalytic activity: ATP + H(2)O = ADP + phosphate

         Enzyme Numbers (IUBMB): EC 3.6.12 EC 3.6.4.131

         Gene Ontology (GO): Selected molecular function terms (see all 8):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0003676nucleic acid binding ----
    GO:0003677DNA binding ----
    GO:0003723RNA binding ----
    GO:0004386helicase activity ----
    GO:0005524ATP binding IEA--
         
    Find genes that share ontologies with DDX55           About GenesLikeMe


    Phenotypes:
         3 GenomeRNAi human phenotypes for DDX55:
     Decreased Tat-dependent transc  Increased S DNA content  Increased cell size 

         3 MGI mutant phenotypes (inferred from 1 allele(MGI details for Ddx55):
     cardiovascular system  mortality/aging  vision/eye 

    Find genes that share phenotypes with DDX55           About GenesLikeMe

    Animal Models:
       inGenious Targeting Laboratory: Let us create your new Knockout/Knockin mouse model for DDX55
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       genOway customized KO model: permanent, tissue-specific or time-controlled inactivation for DDX55
       genOway customized Knockin model: humanization, point mutation, expression monitoring, etc. for DDX55

    miRNA
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    miRTarBase miRNAs that target DDX55:
    hsa-mir-455-3p (MIRT037908), hsa-mir-615-3p (MIRT040465)

    Block miRNA regulation of human, mouse, rat DDX55 using miScript Target Protectors
    1 qRT-PCR Assays for microRNA that regulate DDX55:
    hsa-miR-4272
    SwitchGear 3'UTR luciferase reporter plasmidDDX55 3' UTR sequence
    Inhib. RNA
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    Predesigned siRNA for gene silencing in human, mouse, rat DDX55

    Gene Editing
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    Clone
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    OriGene ORF clones in mouse, rat for DDX55
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    GenScript: all cDNA clones in your preferred vector: DDX55 (NM_020936)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for DDX55
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DDX55

    Cell Line
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DDX55


    (According to UniProtKB, COMPARTMENTS Subcellular localization database, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene.)
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    Subcellular locations from COMPARTMENTS: 

    CompartmentConfidence
    nucleus3
    cytosol2

    (SuperPaths according to PathCards, Pathways according to R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Sino Biological, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to QIAGEN, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Apr 2014 via Entrez Gene).
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        Custom Pathway & Disease-focused RT2 Profiler PCR Arrays for DDX55
    Interactions:

        Search GeneGlobe Interaction Network for DDX55

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    Selected Interacting proteins for DDX55 (Q8NHQ93 ENSP000002381464) via UniProtKB, MINT, STRING, and/or I2D (see all 381)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    HIST1H4AP628053I2D: score=2 
    HIST1H4BP628053I2D: score=2 
    HIST1H4CP628053I2D: score=2 
    HIST1H4DP628053I2D: score=2 
    HIST1H4EP628053I2D: score=2 
    About this table

    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience, ApexBio, HMDB, BitterDB, and/or Novoseek, Ligands according to IUPHAR, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB)
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    Browse Small Molecules at EMD Millipore
       Browse drugs & compounds from Enzo Life Sciences
      Browse compounds at ApexBio 

    Browse Tocris compounds for DDX55



    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 236 Homo sapiens; Apr 25 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN, SwitchGear Genomics,
    Tagged/untagged cDNA clones from OriGene, GenScript, DNA2.0, Vector BioLabs, and/or Addgene, Primers from OriGene, and/or QIAGEN, Flow cytometry from eBioscience )
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    REFSEQ mRNAs for DDX55 gene: 
    NM_020936.1  

    Unigene Cluster for DDX55:

    DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
    Hs.286173  [show with all ESTs]
    Unigene Representative Sequence: AB046815
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000542286(uc001ufh.3 uc001ufk.3) ENST00000544429 ENST00000545042
    ENST00000238146(uc001ufi.3 uc001ufl.3) ENST00000544738 ENST00000540763
    ENST00000538744 ENST00000354291 ENST00000536079 ENST00000539934(uc001ufj.1)
    ENST00000541259 ENST00000543016 ENST00000421670
    miRNA
    Products:
         
    Block miRNA regulation of human, mouse, rat DDX55 using miScript Target Protectors
    1 qRT-PCR Assays for microRNA that regulate DDX55:
    hsa-miR-4272
    SwitchGear 3'UTR luciferase reporter plasmidDDX55 3' UTR sequence
    Inhib. RNA
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    OriGene RNAi products in human, mouse, rat for DDX55
    Predesigned siRNA for gene silencing in human, mouse, rat DDX55
    Clone
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    OriGene ORF clones in mouse, rat for DDX55
    OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
    GenScript: all cDNA clones in your preferred vector: DDX55 (NM_020936)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for DDX55
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DDX55
    Primer
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    OriGene qPCR primer pairs and template standards for DDX55
    OriGene qSTAR qPCR primer pairs in human, mouse for DDX55
    Pre-validated RT2 qPCR Primer Assay in human, mouse, rat DDX55
      QuantiTect SYBR Green Assays in human, mouse, rat DDX55
      QuantiFast Probe-based Assays in human, mouse, rat DDX55

    Additional mRNA sequence: 

    AB046815.1 AK074219.1 AK131442.1 AK301043.1 AK307384.1 AL833756.1 BC030020.2 BC035911.1 

    19 DOTS entries:

    DT.121196153  DT.454722  DT.86854982  DT.92426729  DT.100779464  DT.97842352  DT.121196105  DT.121196128 
    DT.86854981  DT.92426726  DT.102831661  DT.102831662  DT.121196098  DT.121196114  DT.40212881  DT.95264381 
    DT.91927883  DT.92058221  DT.97842350 

    Selected AceView cDNA sequences (see all 177):

    BI962726 CB127604 BM991216 CA455068 BU543109 BE152755 BU619784 BM828819 
    AI480130 BE152754 AA496999 BQ213326 BE048266 BM772886 BM671168 BM710018 
    CB128377 BI518628 CR591246 AA362561 AV654906 BQ959222 BQ723543 F37190 

    GeneLoc Exon Structure

    Selected Alternative Splicing Database (ASD) splice patterns (SP) for DDX55 (see all 12)    About this scheme

    ExUns: 1a · 1b · 1c · 1d · 1e · 1f ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b · 5c ^ 6a · 6b ^ 7a · 7b · 7c ^ 8a · 8b ^ 9a · 9b · 9c ^ 10 ^ 11a · 11b ^
    SP1:                                            -                       -     -                                                                                 
    SP2:                                                                                                                                                            
    SP3:                                            -                       -     -                                                                                 
    SP4:                                      -     -     -     -           -     -                                                                                 
    SP5:                                                                                                                                                            

    ExUns: 12a · 12b ^ 13a · 13b · 13c
    SP1:                              
    SP2:                              
    SP3:                              
    SP4:                              
    SP5:                              


    ECgene alternative splicing isoforms for DDX55

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, Protein expression images according to data from SPIRE 1MOPED, 2PaxDb, and 3MaxQB, plus additional links to SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from QIAGEN, Primers from OriGene, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
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    DDX55 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS <intensity>2/3
    CGAP TAG: AATGCAACCT
    DDX55 Expression
    About this image

    DDX55 Protein expression data from MOPED1, PaxDb2 and MaxQB3    About this image

    DDX55 Protein Expression

    SOURCE GeneReport for Unigene cluster: Hs.286173
        Custom PCR Arrays for DDX55
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    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DDX55

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
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    This gene was present in the common ancestor of eukaryotes.

    Orthologs for DDX55 gene from Selected species (see all 25)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Ddx551 , 5 DEAD (Asp-Glu-Ala-Asp) box polypeptide 551, 5 85.75(n)1
    91.32(a)1
      5 (63.66 cM)5
    678481  NM_026409.41  NP_080685.21 
     1245528645 
    chicken
    (Gallus gallus)
    Aves DDX551 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 77.36(n)
    86.28(a)
      416820  NM_001006185.1  NP_001006185.1 
    lizard
    (Anolis carolinensis)
    Reptilia DDX556
    DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
    82(a)
    1 ↔ 1
    LGb(1759453-1768496)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.62902 Xenopus laevis transcribed sequence with weak similarity more 76.27(n)    CA791208.1 
    zebrafish
    (Danio rerio)
    Actinopterygii ddx552 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 78.17(n)   286745  AF506203.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta CG96301 CG9630 54.48(n)
    49.91(a)
      40974  NM_141520.2  NP_649777.1 
    worm
    (Caenorhabditis elegans)
    Secernentea ZK512.26
    Protein ZK512.2, isoform a
    36(a)
    1 ↔ 1
    III(9141815-9144794) WBGene00013983
    baker's yeast
    (Saccharomyces cerevisiae)
    Saccharomycetes SPB4(YFL002C)4
    SPB41
    Putative ATP-dependent RNA helicase, nucleolar protein more4
    SPB41
    49.76(n)1
    43.84(a)1
      6(146934-145114)4
    8505491, 4  NP_116654.11, 4 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons AT5G054501 AT5G05450 52.94(n)
    49.8(a)
      830428  NM_120627.4  NP_196164.1 
    rice
    (Oryza sativa)
    Liliopsida Os01g01645001 Os01g0164500 52.19(n)
    47.92(a)
      4324413  NM_001048637.1  NP_001042102.1 


    ENSEMBL Gene Tree for DDX55 (if available)
    TreeFam Gene Tree for DDX55 (if available)

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
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    Paralogs for DDX55 gene
    12 SIMAP similar genes for DDX55 using alignment to 6 protein entries:     DDX55_HUMAN (see all proteins):
    DDX56    E4-DBP    mcdrh    DDX10    DDX39B    DDX54
    DDX47    DDX18    DDX5    EIF4A1    EIF4A2    EIF4A3

    Find genes that share paralogs with DDX55           About GenesLikeMe


    2 Pseudogenes.org Pseudogenes for DDX55
    PGOHUM00000239675 PGOHUM00000259532


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, 4UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD), the Human Cytochrome P450 Allele Nomenclature Database, and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers, Cancer Mutation PCR Arrays and Assays, and Copy Number PCR Arrays from QIAGEN)
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    Selected SNPs for DDX55 (see all 525)    About this table                                 

    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 12 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs1506411561,2
    --124084689(+) ACAGGC/TGCACG 1 -- us2k10--------
    rs558785271,2
    C--124084712(+) TTTTT-/TGTATT 1 -- us2k12Minor allele frequency- T:0.00NA CSA 4
    rs1409921851,2
    C--124084843(+) CTTTT-/TTT   
       GTTTG
    TTTGT
    1 -- us2k10--------
    rs2018254361,2
    C--124084843(+) CTTTT-/TTTG  
            
    TTTGT
    1 -- us2k10--------
    rs1836482361,2
    --124084898(+) CTGTCA/GCCCAG 1 -- us2k10--------
    rs7864241,2
    C--124084915(+) atgcaG/Atggtg 1 -- us2k18Minor allele frequency- A:0.07WA NA CSA 14
    rs79529201,2
    C--124085011(+) ccacaC/Tctggc 1 -- us2k10--------
    rs1890887721,2
    --124085013(+) ACACCG/TGGCTA 1 -- us2k10--------
    rs340995491,2
    C--124085062(+) GGCCAA/GGCTGG 1 -- us2k10--------
    rs79705451,2
    C,A--124085080(+) ctcctG/Tacctt 1 -- us2k10--------

    HapMap Linkage Disequilibrium report for DDX55 (124086624 - 124105488 bp)

    Structural Variations
          Database of Genomic Variants (DGV) variations for DDX55: --
    Site Specific Mutation Identification with PCR Assays
    SeqTarget long-range PCR primers for resequencing DDX55
    DNA2.0 Custom Variant and Variant Library Synthesis for DDX55

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
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    Find genes that share disorders with DDX55           About GenesLikeMe

    Genetic Association Database (GAD): DDX55
    Human Genome Epidemiology (HuGE) Navigator: DDX55 (1 document)

    Export disorders for DDX55 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
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    PubMed articles for DDX55 gene, integrated from 10 sources (see all 20):
    (articles sorted by number of sources associating them with DDX55)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Prediction of the coding sequences of unidentified human genes. XVIII. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PubMed id 10997877)1, 2, 3 Nagase T.... Ohara O. (DNA Res. 2000)
    2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S.... Malek J. (Genome Res. 2004)
    3. Genome-wide association and longitudinal analyses reveal genetic loci linking pubertal height growth, pubertal timing and childhood adiposity. (PubMed id 23449627)1 Cousminer D.L....WidAcn E. (Hum. Mol. Genet. 2013)
    4. Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (BMC Syst. Biol. 2011)
    5. Systematic and quantitative assessment of the ubiquitin-modified proteome. (PubMed id 21906983)1 Kim W....Gygi S.P. (Mol. Cell 2011)
    6. System-wide temporal characterization of the proteome and phosphoproteome of human embryonic stem cell differentiation. (PubMed id 21406692)2 Rigbolt K.T....Blagoev B. (Sci. Signal. 2011)
    7. Interactions of pathological hallmark proteins: tubulin polymerization promoting protein/p25, beta-amyloid, and alpha-synuclein. (PubMed id 21832049)1 OlA!h J....OvA!di J. (J. Biol. Chem. 2011)
    8. Mass spectrometric analysis of lysine ubiquitylation reveals promiscuity at site level. (PubMed id 21139048)1 Danielsen J.M....Nielsen M.L. (amp 2011)
    9. Quantitative phosphoproteomics reveals widespread full phosphorylation site occupancy during mitosis. (PubMed id 20068231)2 Olsen J.V....Mann M. (Sci. Signal. 2010)
    10. Genetic associations of variants in genes encoding HIV-dependency factors required for HIV-1 infection. (PubMed id 21083371)4 Chinn L.W....O'Brien S.J. (J. Infect. Dis. 2010)

    (in PubMed, OMIM, and NCBI Bookshelf)
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     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
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    Entrez Gene: 57696 HGNC: 20085 AceView: DDX55 Ensembl:ENSG00000111364 euGenes: HUgn57696
    ECgene: DDX55 H-InvDB: DDX55

    (According to HUGE)
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    HUGE: KIAA1595

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL, and/or others, e.g. Wikipedia and GeneReviews, via UniProtKB/Swiss-Prot)
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    NameDescription
    PharmGKB entry for DDX55 Pharmacogenomics, SNPs, Pathways

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
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    Patent Information for DDX55 gene:
    Search GeneIP for patents involving DDX55

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Cloud-Clone Corp., Thermo Fisher Scientific, LSBio, eBioscience, and/or others, Gene Editing from DNA2.0. Clones from OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Addgene, Cell lines from GenScript, and ESI BIO, Flow cytometery from eBioscience, PCR Arrays from QIAGEN, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, Enzo Life Sciences, and/or ApexBio, In Situ Hybridization Assays from
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