Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DDX51 Gene

Aliases for DDX51 Gene

  • DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 51 2 3
  • DEAD Box Protein 51 4
  • EC 3.6.4.13 4
  • EC 3.6.1 64

External Ids for DDX51 Gene

Summaries for DDX51 Gene

GeneCards Summary for DDX51 Gene

DDX51 (DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 51) is a Protein Coding gene. GO annotations related to this gene include RNA binding and ATP-dependent helicase activity.

UniProtKB/Swiss-Prot for DDX51 Gene

  • ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDX51 Gene

Genomics for DDX51 Gene

Genomic Location for DDX51 Gene

Start:
132,136,594 bp from pter
End:
132,144,335 bp from pter
Size:
7,742 bases
Orientation:
Minus strand

Genomic View for DDX51 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DDX51 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDX51 Gene

Regulatory Elements for DDX51 Gene

Proteins for DDX51 Gene

  • Protein details for DDX51 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N8A6-DDX51_HUMAN
    Recommended name:
    ATP-dependent RNA helicase DDX51
    Protein Accession:
    Q8N8A6
    Secondary Accessions:
    • A8MPT9
    • Q5CZ71
    • Q8IXK5
    • Q96ED1

    Protein attributes for DDX51 Gene

    Size:
    666 amino acids
    Molecular mass:
    72457 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DDX51 Gene

Proteomics data for DDX51 Gene at MOPED

Selected DME Specific Peptides for DDX51 Gene

Post-translational modifications for DDX51 Gene

  • Modification sites at PhosphoSitePlus
  • Ubiquitination at Lys211

Other Protein References for DDX51 Gene

ENSEMBL proteins:
REFSEQ proteins:

Domains for DDX51 Gene

Gene Families for DDX51 Gene

HGNC:
  • DDX :DEAD-boxes

UniProtKB/Swiss-Prot:

DDX51_HUMAN
Domain:
  • The Q motif is unique to and characteristic of the DEAD box family of RNA helicases and controls ATP binding and hydrolysis:
    • Q8N8A6
  • Contains 1 helicase ATP-binding domain.:
    • Q8N8A6
  • Contains 1 helicase C-terminal domain.:
    • Q8N8A6
Family:
  • Belongs to the DEAD box helicase family. DDX51/DBP6 subfamily.:
    • Q8N8A6
genes like me logo Genes that share domains with DDX51: view

Function for DDX51 Gene

Molecular function for DDX51 Gene

UniProtKB/Swiss-Prot CatalyticActivity: ATP + H(2)O = ADP + phosphate
UniProtKB/Swiss-Prot Function: ATP-binding RNA helicase involved in the biogenesis of 60S ribosomal subunits.

Enzyme Numbers (IUBMB) for DDX51 Gene

Gene Ontology (GO) - Molecular Function for DDX51 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003676 nucleic acid binding --
GO:0003677 DNA binding --
GO:0004004 ATP-dependent RNA helicase activity IBA --
GO:0005524 ATP binding IEA --
GO:0008026 ATP-dependent helicase activity --
genes like me logo Genes that share ontologies with DDX51: view

Phenotypes for DDX51 Gene

GenomeRNAi human phenotypes for DDX51:
genes like me logo Genes that share phenotypes with DDX51: view

miRNA for DDX51 Gene

miRTarBase miRNAs that target DDX51

No data available for Animal Models , Transcription Factor Targeting and HOMER Transcription for DDX51 Gene

Localization for DDX51 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DDX51 Gene

Nucleus, nucleolus.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DDX51 Gene COMPARTMENTS Subcellular localization image for DDX51 gene
Compartment Confidence
nucleus 3
cytosol 1
endoplasmic reticulum 1
mitochondrion 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for DDX51 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus --
GO:0005730 nucleolus IBA --
GO:0005737 cytoplasm IBA --
GO:0016020 membrane IDA 19946888
genes like me logo Genes that share ontologies with DDX51: view

Pathways for DDX51 Gene

SuperPathways for DDX51 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DDX51 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006200 obsolete ATP catabolic process --
GO:0006364 rRNA processing IEA --
GO:0010501 RNA secondary structure unwinding IBA --
genes like me logo Genes that share ontologies with DDX51: view

No data available for Pathways by source for DDX51 Gene

Transcripts for DDX51 Gene

Unigene Clusters for DDX51 Gene

DEAD (Asp-Glu-Ala-Asp) box polypeptide 51:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DDX51 Gene

ExUns: 1 ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7a · 7b · 7c · 7d ^ 8 ^ 9a · 9b ^ 10 ^ 11 ^ 12 ^ 13 ^ 14
SP1: - -
SP2:
SP3:
SP4:
SP5: -

Relevant External Links for DDX51 Gene

GeneLoc Exon Structure for
DDX51
ECgene alternative splicing isoforms for
DDX51

Expression for DDX51 Gene

mRNA expression in normal human tissues for DDX51 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for DDX51 Gene

SOURCE GeneReport for Unigene cluster for DDX51 Gene Hs.445168

genes like me logo Genes that share expressions with DDX51: view

Orthologs for DDX51 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for DDX51 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DDX51 36
  • 99.12 (n)
  • 98.99 (a)
DDX51 37
  • 99 (a)
OneToOne
cow
(Bos Taurus)
Mammalia DDX51 36
  • 82.34 (n)
  • 83.3 (a)
DDX51 37
  • 82 (a)
OneToOne
dog
(Canis familiaris)
Mammalia DDX51 36
  • 80.02 (n)
  • 77.11 (a)
DDX51 37
  • 76 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ddx51 36
  • 80 (n)
  • 80 (a)
Ddx51 16
Ddx51 37
  • 76 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia DDX51 37
  • 63 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia DDX51 37
  • 62 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ddx51 36
  • 79.5 (n)
  • 77.67 (a)
chicken
(Gallus gallus)
Aves DDX51 36
  • 62.38 (n)
  • 60.78 (a)
African clawed frog
(Xenopus laevis)
Amphibia Xl.13840 36
tropical clawed frog
(Silurana tropicalis)
Amphibia ddx51 36
  • 56.45 (n)
  • 54.8 (a)
Str.12327 36
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.11218 36
zebrafish
(Danio rerio)
Actinopterygii ddx51 36
  • 56.98 (n)
  • 51.82 (a)
ddx51 37
  • 49 (a)
OneToOne
Dr.4368 36
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP006941 36
  • 45.64 (n)
  • 36.59 (a)
fruit fly
(Drosophila melanogaster)
Insecta Dbp73D 36
  • 48.74 (n)
  • 44.29 (a)
Dbp73D 37
  • 33 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea ZK686.2 37
  • 27 (a)
OneToOne
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes DBP6 37
  • 27 (a)
OneToOne
thale cress
(Arabidopsis thaliana)
eudicotyledons RH1 36
  • 47.15 (n)
  • 42.34 (a)
rice
(Oryza sativa)
Liliopsida Os02g0795900 36
  • 47.93 (n)
  • 42.05 (a)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.5286 36
sea squirt
(Ciona savignyi)
Ascidiacea CSA.2296 37
  • 37 (a)
OneToOne
Species with no ortholog for DDX51:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for DDX51 Gene

ENSEMBL:
Gene Tree for DDX51 (if available)
TreeFam:
Gene Tree for DDX51 (if available)

Paralogs for DDX51 Gene

Selected SIMAP similar genes for DDX51 Gene using alignment to 2 proteins:

genes like me logo Genes that share paralogs with DDX51: view

No data available for Paralogs for DDX51 Gene

Variants for DDX51 Gene

Sequence variations from dbSNP and Humsavar for DDX51 Gene

SNP ID Clin Chr 12 pos Sequence Context AA Info Type MAF
rs1133690 - 132,142,123(-) GGCCC(A/G)GCAGG reference, missense
rs1133694 -- 132,141,646(-) CCCTT(A/G)AGAAA intron-variant
rs3199045 -- 132,136,830(-) aaaac(C/T)tagct utr-variant-3-prime
rs9787982 -- 132,140,773(+) GAGGG(C/T)TGGTT intron-variant
rs9788144 -- 132,136,447(+) GTCTG(C/T)GAACC downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for DDX51 Gene

Variant ID Type Subtype PubMed ID
nsv899699 CNV Gain 21882294
dgv1519n71 CNV Loss 21882294
dgv1520n71 CNV Loss 21882294
nsv899720 CNV Loss 21882294
dgv1521n71 CNV Loss 21882294
nsv428285 CNV Gain 18775914
dgv1522n71 CNV Loss 21882294
dgv1523n71 CNV Loss 21882294
dgv1524n71 CNV Loss 21882294
nsv509493 CNV Insertion 20534489
nsv470333 CNV Loss 18288195
dgv103n21 CNV Loss 19592680
nsv826563 CNV Gain 20364138
nsv899739 CNV Loss 21882294
nsv899740 CNV Loss 21882294
dgv1525n71 CNV Loss 21882294
nsv899743 CNV Loss 21882294
nsv899744 CNV Loss 21882294
nsv944 CNV Insertion 18451855
nsv899745 CNV Loss 21882294

Relevant External Links for DDX51 Gene

HapMap Linkage Disequilibrium report
DDX51

Disorders for DDX51 Gene

No disorders were found for DDX51 Gene.

No data available for UniProtKB/Swiss-Prot for DDX51 Gene

Publications for DDX51 Gene

  1. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  2. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PMID: 17081983) Olsen J.V. … Mann M. (Cell 2006) 3 4
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  4. Large-scale characterization of HeLa cell nuclear phosphoproteins. (PMID: 15302935) Beausoleil S.A. … Gygi S.P. (Proc. Natl. Acad. Sci. U.S.A. 2004) 3
  5. Directed proteomic analysis of the human nucleolus. (PMID: 11790298) Andersen J.S. … Lamond A.I. (Curr. Biol. 2002) 3

Products for DDX51 Gene

Sources for DDX51 Gene

Back to Top

Content