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Aliases for DDX50P1 Gene

Aliases for DDX50P1 Gene

  • DEAD-Box Helicase 50 Pseudogene 1 2 3 5
  • DEAD/H (Asp-Glu-Ala-Asp/His) Box Polypeptide 50 Pseudogene 1 2 3
  • DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 50 Pseudogene 3
  • RH-II/GuB Pseudogene 1 3
  • RH-II/GuBp1 3

External Ids for DDX50P1 Gene

Previous GeneCards Identifiers for DDX50P1 Gene

  • GC02P032280
  • GC02P032427
  • GC02P032165
  • GC02P032428

Summaries for DDX50P1 Gene

GeneCards Summary for DDX50P1 Gene

DDX50P1 (DEAD-Box Helicase 50 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDX50P1 Gene

Genomics for DDX50P1 Gene

Regulatory Elements for DDX50P1 Gene

Enhancers for DDX50P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F032038 0.6 ENCODE 22.7 -161.7 -161665 2.2 HDGF PKNOX1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 BIRC6 DDX50P1 TTC27 SLC30A6 NLRC4 DPY30 ENSG00000271228
GH02F032164 0.2 ENCODE 15.6 -35.2 -35191 3.7 ARNT CREB3L1 MLX WRNIP1 ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 BIRC6 TTC27 DDX50P1 SLC30A6 RNU6-647P ENSG00000272716 NLRC4
GH02F032632 0.8 ENCODE 15.3 +430.8 430811 0.1 TBP ZNF362 RFX1 JUN DPF2 GTF3C2 JUND ATF3 SMARCA4 ADNP BIRC6 DDX50P1 TTC27 MIR4765
GH02F032277 0.5 ENCODE 14.9 +76.6 76551 2.0 PKNOX1 ARNT ARID4B SIN3A DMAP1 ZNF2 ZNF143 FOS SP3 NFYC BIRC6 TTC27 DDX50P1 RNU6-647P SLC30A6 SPAST NLRC4 YIPF4 ENSG00000272754
GH02F032697 0.6 ENCODE 13.5 +495.9 495871 0.2 MAFG MNT ARID1B ZNF316 JUND ZNF26 NFE2 FOS MAFK EMSY BIRC6 DDX50P1 TTC27 MIR558 MIR4765 GC02M032770
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DDX50P1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DDX50P1 Gene

Chromosome:
2
Start:
32,201,498 bp from pter
End:
32,204,218 bp from pter
Size:
2,721 bases
Orientation:
Plus strand

Genomic View for DDX50P1 Gene

Genes around DDX50P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDX50P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDX50P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDX50P1 Gene

Proteins for DDX50P1 Gene

Post-translational modifications for DDX50P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DDX50P1 Gene

Domains & Families for DDX50P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DDX50P1 Gene

Function for DDX50P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDX50P1 Gene

Localization for DDX50P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DDX50P1 Gene

Pathways & Interactions for DDX50P1 Gene

SuperPathways for DDX50P1 Gene

No Data Available

Interacting Proteins for DDX50P1 Gene

Gene Ontology (GO) - Biological Process for DDX50P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DDX50P1 Gene

Transcripts for DDX50P1 Gene

mRNA/cDNA for DDX50P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DDX50P1 Gene

No ASD Table

Relevant External Links for DDX50P1 Gene

GeneLoc Exon Structure for
DDX50P1
ECgene alternative splicing isoforms for
DDX50P1

Expression for DDX50P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DDX50P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of DDX50P1 Gene:

DDX50P1
genes like me logo Genes that share expression patterns with DDX50P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DDX50P1 Gene

Orthologs for DDX50P1 Gene

Evolution for DDX50P1 Gene

ENSEMBL:
Gene Tree for DDX50P1 (if available)
TreeFam:
Gene Tree for DDX50P1 (if available)

No data available for Orthologs for DDX50P1 Gene

Paralogs for DDX50P1 Gene

No data available for Paralogs for DDX50P1 Gene

Variants for DDX50P1 Gene

Relevant External Links for DDX50P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDX50P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DDX50P1 Gene

Disorders for DDX50P1 Gene

No disorders were found for DDX50P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DDX50P1 Gene

Publications for DDX50P1 Gene

  1. Genomic structure of newly identified paralogue of RNA helicase II/Gu: detection of pseudogenes and multiple alternatively spliced mRNAs. (PMID: 11891046) Valdez B.C. … Sequitin A.M. (Gene 2002) 2 3 64

Products for DDX50P1 Gene

Sources for DDX50P1 Gene

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