DDX41 Gene
protein-coding GIFtS: 51
GCID: GC05M176938
|
|
DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
| |
Aliases
for DDX41 gene
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc,
7Ensembl,
8DME,
9miRBase,
and/or 10fRNAdb)
About This Section
|
| Aliases |
|---|
| DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 411 2 | | DEAD-Box Protein Abstrakt2 | | ABS1 2 3 5 | | Probable ATP-Dependent RNA Helicase DDX412 | | DEAD Box Protein 412 3 | | Putative RNA Helicase2 | | DEAD Box Protein Abstrakt Homolog2 3 | | EC 3.6.4.133 | | MGC88281 | | EC 3.6.18 | | 2900024F02Rik2 | | |
Export aliases for DDX41 gene to outside databasesPrevious GC identifers: GC05M176869 GC05M176919 GC05M176871 GC05M171859 |
Summaries
for DDX41 gene(According to Entrez Gene,
Tocris Bioscience,
Wikipedia's
Gene Wiki,
PharmGKB,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
|
Entrez Gene summary for DDX41:
DEAD box proteins, characterized by the conserved motif Asp-Glu-Ala-Asp (DEAD), are putative RNA helicases. They areimplicated in a number of cellular processes involving alteration of RNA secondary structure, such as translationinitiation, nuclear and mitochondrial splicing, and ribosome and spliceosome assembly. Based on their distributionpatterns, some members of the DEAD box protein family are believed to be involved in embryogenesis, spermatogenesis,and cellular growth and division. This gene encodes a member of this family. The function of this member has not beendetermined. Based on studies in Drosophila, the abstrakt gene is widely required during post-transcriptional geneexpression. (provided by RefSeq, Jul 2008)
UniProtKB/Swiss-Prot: DDX41_HUMAN, Q9UJV9Function: Probable ATP-dependent RNA helicase. Is required during post-transcriptional gene expression. May be involvedin pre-mRNA splicing
Gene Wiki entry for DDX41
|
Genomic Views
for DDX41 gene
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69),
Regulatory elements and Epigenetics data according to
QIAGEN,
SABiosciences, and/or
SwitchGear Genomics)
About This Section
| RefSeq DNA sequence:- NC_000005.9 NC_018916.1 NT_023133.13
Regulatory elements:
 SABiosciences Regulatory transcription factor binding sites in the DDX41 gene promoter:
E2F-3a AP-1 ATF-2 E2F-2 IRF-1 E2F E2F-1 STAT3 c-Jun
Other transcription factors
Search SABiosciences Chromatin IP Primers for DDX41
Epigenetics:
| | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DDX41 |
Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 5q35.3 Ensembl cytogenetic band: 5q35.3 HGNC cytogenetic band: 5q35.3DDX41 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc information about chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05M176938: view genomic region
(about GC identifiers)
Start:
|
176,938,578 bp from pter |
End:
|
176,944,470 bp from pter |
Size:
|
5,893 bases |
Orientation:
|
minus strand |
|
Proteins
for DDX41 gene
(According to
1UniProtKB,
HORDE,
neXtProt,
Ensembl,
and/or Reactome,
Modification sites according to 2PhosphoSitePlus,
Specific Peptides from DME,
Protein expression images according to data from SPIRE MOPED and PaxDb,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from
EMD Millipore,
R&D Systems,
GenScript,
Enzo Life Sciences,
OriGene,
Novus Biologicals,
Sino Biological,
ProSpec, and/or
Uscn,
Biochemical Assays by
EMD Millipore,
R&D Systems,
OriGene,
GenScript,
Cell Signaling Technology,
Enzo Life Sciences, and/or
Uscn,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene,
Antibodies by
EMD Millipore,
R&D Systems,
GenScript,
Cell Signaling Technology,
OriGene,
Novus Biologicals,
Thermo Fisher Scientific,
Abcam, and/or
Uscn)
About This Section
|
UniProtKB/Swiss-Prot: DDX41_HUMAN, Q9UJV9 (See
protein sequence)Recommended Name: Probable ATP-dependent RNA helicase DDX41 Size: 622 amino acids; 69838 Da
Subunit: Identified in the spliceosome C complex
Subcellular location: Nucleus (Potential)
Sequence caution: Sequence=CAE46035.1; Type=Miscellaneous discrepancy; Note=Intron retention;
1 PDB 3D structure from  and Proteopedia  for DDX41:2P6N (3D)
Secondary accessions: B2RDC8 Q96BK6 Q96K05 Q9NT96 Q9NW04Explore the universe of human proteins at neXtProt for DDX41: NX_Q9UJV9
Post-translational modifications:
View modification sites using PhosphoSitePlus2View neXtProt modification sites for NX_Q9UJV9
4/15 DME Specific Peptides for DDX41 (Q9UJV9) (see all 15)
DDX41 Protein expression data from MOPED and PaxDb: About this image 
REFSEQ proteins: NP_057306.2
ENSEMBL proteins: ENSP00000330349 ENSP00000422753 ENSP00000421460 ENSP00000425739 ENSP00000426330 ENSP00000427082
Human Recombinant Protein Products:
Gene Ontology (GO): 4 cellular component terms (GO ID links to tree view): About this table
DDX41 for ontologies About GeneDecksing
DDX41 Antibody Products:
Assay Products for DDX41: |
Protein
Domains /
Families
for DDX41 gene(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
|
DDX41 for domains About GeneDecksing
5 InterPro domains/families:Graphical View of Domain Structure for InterPro Entry Q9UJV9ProtoNet protein and cluster: Q9UJV9 2 Blocks protein families: IPB000629 ATP-dependent helicase IPB001878 C2HC-type zinc-finger signature
UniProtKB/Swiss-Prot: DDX41_HUMAN, Q9UJV9Similarity: Belongs to the DEAD box helicase family. DDX41 subfamilySimilarity: Contains 1 CCHC-type zinc fingerSimilarity: Contains 1 helicase ATP-binding domainSimilarity: Contains 1 helicase C-terminal domain |
Function
for DDX41 gene
(According to 1UniProtKB,
Genatlas,
LifeMap Discovery™,
IUBMB, and/or
2DME,
Human phenotypes from GenomeRNAi,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene,
RNAi from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
microRNA from QIAGEN,
Gene Editing from DNA2.0,
Clones from EMD Millipore,
OriGene,
SwitchGear Genomics,
GenScript,
Sino Biological,
DNA2.0,
and Vector BioLabs,
Cell Lines from GenScript,
LifeMap BioReagents,
In Situ Hybridization Assays from Advanced Cell Diagnostics,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene.)
About This Section
|
Function Summary:
UniProtKB/Swiss-Prot: DDX41_HUMAN, Q9UJV9Function: Probable ATP-dependent RNA helicase. Is required during post-transcriptional gene expression. May be involvedin pre-mRNA splicingCatalytic activity: ATP + H(2)O = ADP + phosphateEnzyme Numbers (IUBMB): EC 3.6.12 EC 3.6.4.131
Clone
Products: |  | Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore | |  | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DDX41 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DDX41 (see all 2)
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling 
| |  | GenScript: all cDNA clones in your preferred vector: DDX41 (NM_016222) | |  | Browse Sino Biological Human cDNA Clones | |  | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DDX41 | |  | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DDX41 |
In Situ Assay
Products: |
 | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DDX41 |
Gene Ontology (GO): 5/6 molecular function terms (GO ID links to tree view) (see all 6): About this table
DDX41 for ontologies About GeneDecksing
5 GenomeRNAi human phenotypes for DDX41:
|
Pathways & Interactions
for DDX41 gene
(Pathways according to
EMD Millipore,
R&D Systems,
Cell Signaling Technology,
KEGG,
PharmGKB,
BioSystems,
Reactome,
Tocris Bioscience,
GeneGo (Thomson Reuters),
QIAGEN,
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Interaction Networks according to
SABiosciences,
and/or STRING,
Interactions according to 1UniProtKB,
2MINT,
3I2D, and/or
4STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene).
About This Section
|
Interactions:
SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for DDX41
STRING Interaction
Network Preview (showing 5 interactants - click image to see 18)
5/760 Interacting proteins for DDX41 (Q9UJV92, 3 ENSP000003303494) via UniProtKB, MINT, STRING, and/or I2D (see all 760)About this table
Gene Ontology (GO): 5/7 biological process terms (GO ID links to tree view) (see all 7): About this table
DDX41 for ontologies About GeneDecksing
|
Drugs & Compounds
for DDX41 gene(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
EMD Millipore, Tocris Bioscience
HMDB,
BitterDB, and/or
Novoseek, and Drugs according to
DrugBank,
Enzo Life Sciences, and/or
PharmGKB, with drugs/clinical trials/news
search links to CenterWatch)
About This Section
|
DDX41 for compounds About GeneDecksing
 Browse Tocris compounds for DDX41
1 Novoseek chemical compound relationship for DDX41 gene About this table
| Compound |
-log (P-Val) |
Hits |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| retinoic acid |
6.04 |
1 |
8065313 (1) |
Search CenterWatch for drugs/clinical trials and news about DDX41
|
Transcripts
for DDX41 gene(Secondary structures according to
fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
transcript ids from Ensembl
with links to UCSC,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from
EMD Millipore,
siRNAs from
OriGene,
QIAGEN,
shRNA from
OriGene,
microRNA from QIAGEN,
Tagged/untagged cDNA clones from
OriGene,
SwitchGear Genomics,
GenScript,
DNA2.0,
Vector BioLabs,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN
)
About This Section
|
REFSEQ mRNAs for DDX41 gene: NM_016222.2 Unigene Cluster for DDX41: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 Hs.484288 [show with all ESTs]Unigene Representative Sequence: AK09154517 Ensembl transcripts including schematic representations, and UCSC links where relevant: ENST00000512334 ENST00000330503(uc003mhn.3) ENST00000507955(uc003mho.3)
ENST00000505081(uc003mhq.1) ENST00000503078(uc003mhp.3) ENST00000507900
ENST00000504807 ENST00000512027 ENST00000511040 ENST00000508279 ENST00000513562
ENST00000512431 ENST00000504781 ENST00000509576 ENST00000506965 ENST00000515562
ENST00000510171
Clone
Products: | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DDX41 (see all 3)
OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DDX41 (see all 2)
OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling
| | | GenScript: all cDNA clones in your preferred vector: DDX41 (NM_016222) | | | DNA2.0 Custom Codon Optimized Gene
Synthesis Service for DDX41 | | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DDX41 |
Additional cDNA sequence: AF195417.1 AK001255.1 AK026117.1 AK027768.1 AK091545.1 AK091774.1 AK092585.1 AK222598.1 AK310525.1 AK315491.1 AL137455.1 BC015476.1 BC067902.1 BX641072.1 24/37 DOTS entries (see all 37): DT.100847188 DT.85101027 DT.120867314 DT.120867280 DT.100847193 DT.100847194 DT.97768327 DT.92057283 DT.120867293 DT.120867276 DT.120867306 DT.100847199 DT.120867223 DT.95094554 DT.100847198 DT.120867264 DT.120867238 DT.120867247 DT.100847181 DT.100847183 DT.100847202 DT.120867251 DT.120867283 DT.120867295 24/579 AceView cDNA sequences (see all 579): BQ670983 BM835743 BM772833 CF131225 BM767448 BM835673 BM753057 BX360478 CB153413 BQ679668 CF272274 BM773396 BQ063674 BM772003 BM771589 BQ954270 BM766105 BQ420424 CF132268 CA487331 BM772000 BQ643283 BF337946 BU172972
GeneLoc Exon Structure
5/25 Alternative Splicing Database (ASD) splice patterns (SP) for DDX41 (see all 25) About this scheme
| ExUns: | 1a | · | 1b | · | 1c | ^ | 2a | · | 2b | ^ | 3a | · | 3b | · | 3c | ^ | 4 | ^ | 5 | ^ | 6a | · | 6b | · | 6c | ^ | 7a | · | 7b | · | 7c | ^ | 8a | · | 8b | · | 8c | · | 8d | ^ | 9a | · | 9b | · | 9c | ^ | 10a | · | 10b | · | 10c | · |
|---|
|
| SP1: | | | | | | | - | | | | - | | - | | | | | | | | | | | | - | | | | - | | - | | | | | | | | | | - | | - | | - | | | | | | | | |
| SP2: | | | | | | | - | | | | | | | | | | | | | | | | | | - | | | | - | | - | | | | | | | | | | - | | - | | - | | | | | | | | |
| SP3: | | | | | | | - | | | | - | | - | | | | - | | - | | - | | | | - | | | | - | | - | | | | | | | | | | - | | - | | - | | | | | | | | |
| SP4: | | | | | | | - | | | | - | | - | | | | | | | | | | | | - | | | | - | | - | | | | | | - | | - | | - | | - | | - | | | | | | | | |
| SP5: | | | | | | | - | | | | - | | - | | | | | | | | | | | | - | | | | - | | - | | | | | | | | | | - | | - | | | | | | | | | |
| ExUns: | 10d | ^ | 11 | ^ | 12a | · | 12b | · | 12c | · | 12d | · | 12e | ^ | 13 | ^ | 14 | ^ | 15a | · | 15b | ^ | 16a | · | 16b | ^ | 17 | ^ | 18 | ^ | 19 | ^ | 20 | ^ | 21 | ^ | 22 |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | - | | | | | | | | | | | | | | | | | | | | | | |
| SP2: | | | | | | | | | | | | | | | | | - | | | | | | | | | | | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP4: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP5: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
ECgene alternative splicing isoforms for DDX41
|
Expression
for DDX41 gene
(RNA expression data according to
H-InvDB,
NONCODE,
miRBase, and
RNAdb,
Expression images according to data from
BioGPS,
Illumina Human BodyMap, and
CGAP
SAGE,
Sets of similar genes according to GeneDecks,
in vivo and in vitro expression data from LifeMap Discovery™,
plus additional links to
Genevestigator, and/or
SOURCE, and/or
BioGPS, and/or
UniProtKB,
PCR Arrays from
SABiosciences,
Primers from
OriGene,
SABiosciences, and/or
QIAGEN,
In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section
| DDX41 expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: GACTTCTGAG
About this image
See DDX41 Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for DDX41
SOURCE GeneReport for Unigene cluster: Hs.484288
SABiosciences Custom PCR Arrays for DDX41
Primer
Products: | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for DDX41
Browse OriGene validated miRNA SYBR primer pairs
| | | SABiosciences RT2 qPCR Primer Assay in human, mouse, rat DDX41 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DDX41 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DDX41 | In Situ
Assay Products: |
| Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DDX41 |
Orthologs
for DDX41 gene
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
,
5MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase,
and/or
6Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam)
About This Section
|
This gene was present in the common ancestor of eukaryotes.
Orthologs for DDX41 gene from 9/32 species (see all 32) About this table
| Organism |
Taxonomic
classification |
Gene |
Description |
Human
Similarity |
Orthology
Type |
Details |
mouse
(Mus musculus) |
Mammalia |
Ddx411 , 5 |
DEAD (Asp-Glu-Ala-Asp) box polypeptide 411, 5 |
89.39(n)1
98.87(a)1 |
|
13 (30.06 cM)5
729351 NM_134059.21 NP_598820.21
555304105 |
chicken
(Gallus gallus) |
Aves |
LOC1008598101 |
probable ATP-dependent RNA helicase DDX41-like |
84.24(n)
96.58(a) |
|
100859810 XM_003643675.1 XP_003643723.1 |
lizard
(Anolis carolinensis) |
Reptilia |
DDX416 |
-- |
90(a) |
1 ↔ 1 |
2(145603016-145621319) |
African clawed frog
(Xenopus laevis) |
Amphibia |
Xl.245332 |
Xenopus laevis transcribed sequence with weak similarity more |
76.94(n) |
|
CB198425.2 |
zebrafish
(Danio rerio) |
Actinopterygii |
Dr.122232 |
Transcribed sequence with weak similarity to protein more |
81.07(n) |
|
BQ617609.1 |
fruit fly
(Drosophila melanogaster) |
Insecta |
abs1 |
abstrakt |
65.72(n)
67.34(a) |
|
40530 NM_079496.3 NP_524220.1 |
worm
(Caenorhabditis elegans) |
Secernentea |
sacy-11 |
Protein SACY-1 |
54.97(n)
54.8(a) |
|
172413 NM_059561.3 NP_491962.1 |
thale cress
(Arabidopsis thaliana) |
eudicotyledons |
AT4G333701 |
putative DEAD-box ATP-dependent RNA helicase 43 |
59.09(n)
64.66(a) |
|
829474 NM_119491.1 NP_195063.1 |
rice
(Oryza sativa) |
Liliopsida |
Os.269982 |
Oryza sativa (japonica cultivar-group) cDNA cloneJ more |
75.53(n) |
|
AK060595.1 |
ENSEMBL Gene Tree for DDX41 (if available)
TreeFam Gene Tree for DDX41 (if available) |
Paralogs
for DDX41 gene(Paralogs according to
1HomoloGene,
2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
About This Section
| Paralogs for DDX41 gene
- DDX12 DDX52 DDX172 DDX432 DDX532
18/26 SIMAP similar genes for DDX41 using alignment to 7 protein entries: DDX41_HUMAN (see all proteins)
(see all similar genes):DDX23 MST162 DDX56 DKFZp547B159 DDX54 DDX5
DDX3X EIF4A2 DDX3Y DDX52 DDX59 DKFZp686J01190
DDX17 DDX39B DDX43 DDX18 BAT1 DDX47
DDX41 for paralogs About GeneDecksing
|
Genomic Variants
for DDX41 gene(SNPs/Variants according to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE,
UniProtKB, and
DNA2.0,
Linkage Disequilibrium by HapMap,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB), Blood group antigen gene mutations by BGMUT,
Resequencing Primers from QIAGEN,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section
|
| Genomic Data | Transcription Related Data | Allele Frequencies | | SNP ID | Valid | Clinical
significance | Chr 5 pos | Sequence | # | AA
Chg | Type | More | # | Allele
freq | Pop | Total
sample | More |
|---|
HapMap Linkage Disequilibrium report for DDX41 (176938578 - 176944470 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 1 variation for DDX41
1 CNV: 36374 | SABiosciences Cancer Mutation PCR Assays |
|
Disorders
/ Diseases
for DDX41 gene
(in which this Gene is Involved, According to MalaCards,
OMIM, UniProtKB,
the University of Copenhagen DISEASES
database, Novoseek,
Genatlas, GeneTests,
GAD,
HuGE Navigator,
and/or TGDB.)
About This Section
|
DDX41 for disorders About GeneDecksing
OMIM gene information: 608170
OMIM disorders: --
20/24  diseases for DDX41 (see all 24): About MalaCardsspinal muscular atrophy hypersensitivity reaction type ii disease human immunodeficiency virus infectious disease muscular atrophy
gastrointestinal system disease lupus nephritis lyme disease nephritis
myeloid malignancy embryonal carcinoma tetanus hepatitis c
retinoblastoma hepatitis b vaccinia cholera
dermatitis hepatitis immunodeficiency influenza
2 Novoseek disease relationships for DDX41 gene About this table
| Disease |
-log (P-Val) |
Hits |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| retinoblastoma |
45.1 |
2 |
8834177 (1), 9694872 (1) |
| tumors |
0 |
1 |
9694872 (1) |
Export disorders for DDX41 gene to outside databases
|
Publications
for DDX41 gene (in
PubMed.
Associations of this gene to articles via
1Entrez Gene,
2UniProtKB/Swiss-Prot,
3HGNC,
4GAD,
5PharmGKB,
6HMDB,
7DrugBank,
8UniProtKB/TrEMBL,
9 Novoseek, and/or
10fRNAdb)
About This Section
|
PubMed articles for DDX41 gene, integrated from 9 sources (see all 89):
(articles sorted by number of sources associating them with DDX41) | |  | Utopia: connect your pdf to the dynamic
world of online information |
- Developmental and cell biological functions of the Drosophila DEAD- box protein abstrakt. (PubMed id 10607561)1, 2, 3 Irion U. and Leptin M. (1999)
- Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)1, 2 Gerhard D.S....Malek J. (2004)
- Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis. (PubMed id 11991638)1, 2 Jurica M.S.... Moore M.J. (2002)
- The proteomic analysis of endogenous FAT10 substrates identifies p62/SQSTM1 as a substrate of FAT10ylation. (PubMed id 22797925)1 Aichem A....Groettrup M. (2012)
- The helicase DDX41 recognizes the bacterial secondary messengers cyclic di-GMP and cyclic di-AMP to activate a type I interferon immun e response. (PubMed id 23142775)1 Parvatiyar K....Cheng G. (2012)
- Initial characterization of the human central proteome. (PubMed id 21269460)2 Burkard T.R.... Colinge J. (2011)
- A proteome-wide, quantitative survey of in vivo ubiqui tylation sites reveals widespread regulatory roles. (PubMed id 21890473)1 Wagner S.A....Choudhary C. (2011)
- Proliferating cell nuclear antigen (PCNA)-associated KIAA0101/PAF15 protein is a cell cycle-regulated anaphase-promoting complex/cyc losome substrate. (PubMed id 21628590)1 Emanuele M.J....Elledge S.J. (2011)
- Purification and identification of endogenous polySUMO conjugates. (PubMed id 21252943)1 Bruderer R....Hay R.T. (2011)
|
External Searches for DDX41 gene
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing DDX41 gene
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
Kegg,
and/or
H-InvDB)
About This Section
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Other Databases showing DDX41 gene
(According to HUGE)
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Specialized Databases showing DDX41 gene(According to PharmGKB,
ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
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| Name | Description |
| PharmGKB entry for DDX41 | Pharmacogenomics, SNPs, Pathways |
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| Patent Information for DDX41 gene:
Search GeneIP for patents involving DDX41
GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
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Products
for DDX41 gene(Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or
Enzo Life Sciences),
In Situ Hybridization Assays from
Advanced Cell Diagnostics
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| | |  | Browse OriGene Antibodies | | OriGene shRNA RFP for DDX41 | | | OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DDX41 | | OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for DDX41 | | | OriGene Protein Over-expression Lysate for DDX41 | | Browse OriGene Fluorogenic Cell Assay Kits | | | OriGene siRNA for DDX41 | | OriGene 3'-UTR Clone for DDX41 | | | OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DDX41 | | OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DDX41 | | | Browse OriGene GFP tagged cDNA clones in CMV expression vector | | Browse OriGene MicroRNA Expression Plasmids | | | Browse OriGene basic RS shRNAs | | Browse OriGene validated miRNA SYBR primer pairs | | | OriGene Purified Protein for DDX41 | | OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling | | | OriGene Custom Antibody Services for DDX41 | | OriGene Custom Protein Services for DDX41 | | | OriGene Custom Immunoassay Development | | |
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| | | QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat DDX41 | | | Search QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing DDX41 | | | QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DDX41 | | | QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DDX41 | | | QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DDX41 | | | QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DDX41 |
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| | | | Search Tocris compounds for DDX41 |
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 | | | DDX41 Proteins, Antibodies, CLIAs, and ELISAs |
| | | | | Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DDX41 |
|  |  |  | | | | Search ThermoFisher Antibodies for DDX41 |
| | | Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DDX41 |
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