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Aliases for DDX39AP1 Gene

Aliases for DDX39AP1 Gene

  • DEAD-Box Helicase 39A Pseudogene 1 2 3 5
  • DEAD (Asp-Glu-Ala-Asp) Box Polypeptide 39A Pseudogene 1 2

External Ids for DDX39AP1 Gene

Previous GeneCards Identifiers for DDX39AP1 Gene

  • GC13M023277

Summaries for DDX39AP1 Gene

GeneCards Summary for DDX39AP1 Gene

DDX39AP1 (DEAD-Box Helicase 39A Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDX39AP1 Gene

Genomics for DDX39AP1 Gene

Regulatory Elements for DDX39AP1 Gene

Enhancers for DDX39AP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH13F022703 0.7 ENCODE 0.8 +2.3 2296 1.0 PKNOX1 INSM2 FEZF1 ZNF366 SCRT2 ZNF639 SCRT1 GFI1B OVOL3 ZEB2 DDX39AP1 FTH1P7
GH13F022792 0.9 ENCODE 0.2 -87.6 -87617 2.0 ELF3 RARA CREM SP5 CEBPB PPARGC1A ATF4 ETV4 CEBPA ZBTB26 GC13P022809 DDX39AP1
GH13F022788 0.6 ENCODE 0.2 -83.1 -83060 1.4 SOX13 TEAD1 TCF7 CREM TCF7L2 TEAD3 GC13P022809 DDX39AP1
GH13F022790 0.2 ENCODE 0.2 -83.9 -83931 0.2 GC13P022809 DDX39AP1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DDX39AP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DDX39AP1 Gene

Chromosome:
13
Start:
22,702,740 bp from pter
End:
22,706,206 bp from pter
Size:
3,467 bases
Orientation:
Minus strand

Genomic View for DDX39AP1 Gene

Genes around DDX39AP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDX39AP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDX39AP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDX39AP1 Gene

Proteins for DDX39AP1 Gene

Post-translational modifications for DDX39AP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DDX39AP1 Gene

Domains & Families for DDX39AP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DDX39AP1 Gene

Function for DDX39AP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDX39AP1 Gene

Localization for DDX39AP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DDX39AP1 Gene

Pathways & Interactions for DDX39AP1 Gene

SuperPathways for DDX39AP1 Gene

No Data Available

Interacting Proteins for DDX39AP1 Gene

Gene Ontology (GO) - Biological Process for DDX39AP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DDX39AP1 Gene

Transcripts for DDX39AP1 Gene

mRNA/cDNA for DDX39AP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DDX39AP1 Gene

No ASD Table

Relevant External Links for DDX39AP1 Gene

GeneLoc Exon Structure for
DDX39AP1
ECgene alternative splicing isoforms for
DDX39AP1

Expression for DDX39AP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DDX39AP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of DDX39AP1 Gene:

DDX39AP1
genes like me logo Genes that share expression patterns with DDX39AP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DDX39AP1 Gene

Orthologs for DDX39AP1 Gene

Evolution for DDX39AP1 Gene

ENSEMBL:
Gene Tree for DDX39AP1 (if available)
TreeFam:
Gene Tree for DDX39AP1 (if available)

No data available for Orthologs for DDX39AP1 Gene

Paralogs for DDX39AP1 Gene

No data available for Paralogs for DDX39AP1 Gene

Variants for DDX39AP1 Gene

Relevant External Links for DDX39AP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDX39AP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DDX39AP1 Gene

Disorders for DDX39AP1 Gene

No disorders were found for DDX39AP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for DDX39AP1 Gene

Publications for DDX39AP1 Gene

No publications were found for DDX39AP1 Gene.

Products for DDX39AP1 Gene

Sources for DDX39AP1 Gene

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