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Aliases for DDX11L5 Gene

Aliases for DDX11L5 Gene

  • DEAD/H-Box Helicase 11 Like 5 2 3 5
  • DEAD/H (Asp-Glu-Ala-Asp/His) Box Polypeptide 11 Like 5 2
  • DEAD/H (Asp-Glu-Ala-Asp/His) Box Helicase 11 Like 5 2

External Ids for DDX11L5 Gene

Summaries for DDX11L5 Gene

GeneCards Summary for DDX11L5 Gene

DDX11L5 (DEAD/H-Box Helicase 11 Like 5) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDX11L5 Gene

Genomics for DDX11L5 Gene

Regulatory Elements for DDX11L5 Gene

Enhancers for DDX11L5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G000314 0.4 dbSUPER 5.2 +304.1 304114 2.7 CTCF RAD21 DOCK8 C9orf66 CBWD1 DDX11L5 GC09P000333 GC09M000242
GH09G000013 0.4 Ensembl 0.7 +1.7 1715 1.0 NFIC DDX11L5 PIR49316
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DDX11L5 on UCSC Golden Path with GeneCards custom track

Genomic Location for DDX11L5 Gene

Chromosome:
9
Start:
11,987 bp from pter
End:
14,525 bp from pter
Size:
2,539 bases
Orientation:
Plus strand

Genomic View for DDX11L5 Gene

Genes around DDX11L5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDX11L5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDX11L5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDX11L5 Gene

Proteins for DDX11L5 Gene

  • Protein details for DDX11L5 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B7ZGX3
    Recommended name:
    DEAD/H box polypeptide 11 like 5
    Protein Accession:
    B7ZGX3

    Protein attributes for DDX11L5 Gene

    Size:
    76 amino acids
    Molecular mass:
    8546 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DDX11L5 Gene

Post-translational modifications for DDX11L5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DDX11L5 Gene

Domains & Families for DDX11L5 Gene

Protein Domains for DDX11L5 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for DDX11L5 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DDX11L5: view

No data available for Gene Families and UniProtKB/Swiss-Prot for DDX11L5 Gene

Function for DDX11L5 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDX11L5 Gene

Localization for DDX11L5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DDX11L5 Gene

Pathways & Interactions for DDX11L5 Gene

SuperPathways for DDX11L5 Gene

No Data Available

Interacting Proteins for DDX11L5 Gene

Gene Ontology (GO) - Biological Process for DDX11L5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DDX11L5 Gene

Drugs & Compounds for DDX11L5 Gene

No Compound Related Data Available

Transcripts for DDX11L5 Gene

mRNA/cDNA for DDX11L5 Gene

(3) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DDX11L5 Gene

DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DDX11L5 Gene

No ASD Table

Relevant External Links for DDX11L5 Gene

GeneLoc Exon Structure for
DDX11L5
ECgene alternative splicing isoforms for
DDX11L5

Expression for DDX11L5 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DDX11L5 Gene

mRNA differential expression in normal tissues according to GTEx for DDX11L5 Gene

This gene is overexpressed in Testis (x23.9) and Whole Blood (x13.3).

NURSA nuclear receptor signaling pathways regulating expression of DDX11L5 Gene:

DDX11L5

SOURCE GeneReport for Unigene cluster for DDX11L5 Gene:

Hs.719844
genes like me logo Genes that share expression patterns with DDX11L5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DDX11L5 Gene

Orthologs for DDX11L5 Gene

Evolution for DDX11L5 Gene

ENSEMBL:
Gene Tree for DDX11L5 (if available)
TreeFam:
Gene Tree for DDX11L5 (if available)

No data available for Orthologs for DDX11L5 Gene

Paralogs for DDX11L5 Gene

(3) SIMAP similar genes for DDX11L5 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DDX11L5: view

No data available for Paralogs for DDX11L5 Gene

Variants for DDX11L5 Gene

Sequence variations from dbSNP and Humsavar for DDX11L5 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs1000581968 -- 10,357(+) AACCC(A/G/T)AACCC upstream-variant-2KB
rs1004683526 -- 11,449(+) ATAGT(C/G)GTGGC upstream-variant-2KB
rs1004799928 -- 10,643(+) GCACT(C/G)AACCG upstream-variant-2KB
rs1011539562 -- 14,246(+) CAATT(C/G)TGCCA nc-transcript-variant, downstream-variant-500B
rs1012207485 -- 10,027(+) CCCAA(A/C)CCCAC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DDX11L5 Gene

Variant ID Type Subtype PubMed ID
dgv3939n106 CNV duplication 24896259
esv23366 CNV gain+loss 19812545
nsv1076652 CNV duplication 25765185
nsv471464 CNV gain 19718026
nsv482128 CNV gain 20164927
nsv8400 CNV gain+loss 18304495
nsv972288 CNV duplication 23825009
nsv982187 CNV duplication 23825009
nsv982355 CNV duplication 23825009

Relevant External Links for DDX11L5 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDX11L5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DDX11L5 Gene

Disorders for DDX11L5 Gene

Relevant External Links for DDX11L5

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DDX11L5

No disorders were found for DDX11L5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DDX11L5 Gene

Publications for DDX11L5 Gene

  1. DDX11L: a novel transcript family emerging from human subtelomeric regions. (PMID: 19476624) Costa V. … Ciccodicola A. (BMC Genomics 2009) 2 3 64

Products for DDX11L5 Gene

Sources for DDX11L5 Gene

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