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Aliases for DDX11L1 Gene

Aliases for DDX11L1 Gene

  • DEAD/H-Box Helicase 11 Like 1 2 3 5
  • DEAD/H (Asp-Glu-Ala-Asp/His) Box Polypeptide 11 Like 1 2
  • DEAD/H (Asp-Glu-Ala-Asp/His) Box Helicase 11 Like 1 2

External Ids for DDX11L1 Gene

Previous GeneCards Identifiers for DDX11L1 Gene

  • GC16U900667
  • GC00U930010

Summaries for DDX11L1 Gene

GeneCards Summary for DDX11L1 Gene

DDX11L1 (DEAD/H-Box Helicase 11 Like 1) is a Pseudogene.

Additional gene information for DDX11L1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDX11L1 Gene

Genomics for DDX11L1 Gene

Regulatory Elements for DDX11L1 Gene

Enhancers for DDX11L1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH01H000919 1.6 Ensembl ENCODE dbSUPER 11.2 +908.5 908522 2.4 PKNOX1 ARID4B SIN3A FEZF1 ZNF2 DEK ZHX2 REST ZNF592 GLIS1 EGID-729587 ENSG00000229905 WBP1LP6 ENSG00000235146 MIR1302-2HG DDX11L1 ENSG00000230699 HES4 LINC00115 GC01M000917
GH01H000998 1.4 ENCODE dbSUPER 11.2 +988.8 988771 3.5 MLX FEZF1 DMAP1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A MEF2D SSRP1 INTS11 WASH7P ATAD3B ENSG00000240731 ENSG00000230092 CCNL2 CDK11A SLC35E2 LOC100288379 LOC100129381
GH01H000939 1.1 ENCODE 11.2 +930.6 930586 6.3 HDGF PKNOX1 ARNT FEZF1 ZNF2 ZNF766 SP3 REST ZFP41 SMARCA4 EGID-729587 INTS11 ENSG00000229905 WBP1LP6 ENSG00000235146 MIR1302-2HG NOC2L WASH7P PLEKHN1 ENSG00000241180
GH01H000925 0.9 ENCODE 11.2 +913.8 913807 0.2 INSM2 ZNF76 KLF17 GLIS2 ZNF366 SCRT2 KLF7 ZNF391 EGR2 SP3 EGID-729587 ENSG00000229905 WBP1LP6 ENSG00000235146 MIR1302-2HG DDX11L1 LINC01128 SAMD11 GC01M000926
GH01H000013 0.2 Ensembl 0.7 +1.6 1632 0.6 LOC101929784 DDX11L1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DDX11L1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DDX11L1 Gene

Genomic Locations for DDX11L1 Gene
chr1:11,869-14,409
(GRCh38/hg38)
Size:
2,541 bases
Orientation:
Plus strand
chr1:11,869-14,412
(GRCh37/hg19)

Genomic View for DDX11L1 Gene

Genes around DDX11L1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DDX11L1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DDX11L1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDX11L1 Gene

Proteins for DDX11L1 Gene

  • Protein details for DDX11L1 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    B7ZGX0
    Recommended name:
    DEAD/H box polypeptide 11 like 1
    Protein Accession:
    B7ZGX0

    Protein attributes for DDX11L1 Gene

    Size:
    76 amino acids
    Molecular mass:
    8575 Da
    Quaternary structure:
    No Data Available

neXtProt entry for DDX11L1 Gene

Post-translational modifications for DDX11L1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DDX11L1 Gene

Domains & Families for DDX11L1 Gene

Protein Domains for DDX11L1 Gene

ProtoNet:

Suggested Antigen Peptide Sequences for DDX11L1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DDX11L1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for DDX11L1 Gene

Function for DDX11L1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DDX11L1 Gene

Localization for DDX11L1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DDX11L1 Gene

Pathways & Interactions for DDX11L1 Gene

SuperPathways for DDX11L1 Gene

No Data Available

Interacting Proteins for DDX11L1 Gene

Gene Ontology (GO) - Biological Process for DDX11L1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DDX11L1 Gene

Drugs & Compounds for DDX11L1 Gene

No Compound Related Data Available

Transcripts for DDX11L1 Gene

mRNA/cDNA for DDX11L1 Gene

(7) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DDX11L1 Gene

DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 like 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DDX11L1 Gene

No ASD Table

Relevant External Links for DDX11L1 Gene

GeneLoc Exon Structure for
DDX11L1
ECgene alternative splicing isoforms for
DDX11L1

Expression for DDX11L1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DDX11L1 Gene

mRNA differential expression in normal tissues according to GTEx for DDX11L1 Gene

This gene is overexpressed in Testis (x27.8), Whole Blood (x15.5), Small Intestine - Terminal Ileum (x5.2), and Pituitary (x4.5).

NURSA nuclear receptor signaling pathways regulating expression of DDX11L1 Gene:

DDX11L1

SOURCE GeneReport for Unigene cluster for DDX11L1 Gene:

Hs.714157
genes like me logo Genes that share expression patterns with DDX11L1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DDX11L1 Gene

Orthologs for DDX11L1 Gene

Evolution for DDX11L1 Gene

ENSEMBL:
Gene Tree for DDX11L1 (if available)
TreeFam:
Gene Tree for DDX11L1 (if available)

No data available for Orthologs for DDX11L1 Gene

Paralogs for DDX11L1 Gene

(3) SIMAP similar genes for DDX11L1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DDX11L1: view

No data available for Paralogs for DDX11L1 Gene

Variants for DDX11L1 Gene

Sequence variations from dbSNP and Humsavar for DDX11L1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1002315756 -- 10,321(+) AACCC(C/T)AACCC upstream-variant-2KB
rs1006094974 -- 10,641(+) CGCGC(A/C)GGCGC upstream-variant-2KB
rs1008829651 -- 10,043(+) AACCC(A/T)AACCC upstream-variant-2KB
rs1010989343 -- 10,063(+) CCCTA(A/C)CCCTA upstream-variant-2KB
rs1015259029 -- 10,255(+) ACCCT(A/T)AACCC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for DDX11L1 Gene

Variant ID Type Subtype PubMed ID
nsv7879 CNV gain+loss 18304495
nsv482937 CNV loss 15286789
nsv428112 CNV gain 18775914
nsv1147468 CNV duplication 26484159
nsv1076307 CNV duplication 25765185
esv27265 CNV gain+loss 19812545
dgv1n82 CNV duplication 23825009
dgv1n106 CNV duplication 24896259
dgv1e59 CNV duplication 20981092

Relevant External Links for DDX11L1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DDX11L1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DDX11L1 Gene

Disorders for DDX11L1 Gene

Relevant External Links for DDX11L1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DDX11L1

No disorders were found for DDX11L1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DDX11L1 Gene

Publications for DDX11L1 Gene

  1. DDX11L: a novel transcript family emerging from human subtelomeric regions. (PMID: 19476624) Costa V … Ciccodicola A (BMC genomics 2009) 2 3 60
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 60

Products for DDX11L1 Gene

Sources for DDX11L1 Gene

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