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Aliases for DDI1 Gene

Aliases for DDI1 Gene

  • DNA-Damage Inducible 1 Homolog 1 (S. Cerevisiae) 2 3
  • DDI1, DNA-Damage Inducible 1, Homolog 1 (S. Cerevisiae) 2

External Ids for DDI1 Gene

Previous GeneCards Identifiers for DDI1 Gene

  • GC00U915586
  • GC11P103412
  • GC11U900686
  • GC11P103907
  • GC11P099836

Summaries for DDI1 Gene

GeneCards Summary for DDI1 Gene

DDI1 (DNA-Damage Inducible 1 Homolog 1 (S. Cerevisiae)) is a Protein Coding gene. GO annotations related to this gene include aspartic-type endopeptidase activity. An important paralog of this gene is DDI2.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DDI1 Gene

Genomics for DDI1 Gene

Regulatory Elements for DDI1 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for DDI1 Gene

Start:
104,036,580 bp from pter
End:
104,039,194 bp from pter
Size:
2,615 bases
Orientation:
Plus strand

Genomic View for DDI1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for DDI1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DDI1 Gene

Proteins for DDI1 Gene

  • Protein details for DDI1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8WTU0-DDI1_HUMAN
    Recommended name:
    Protein DDI1 homolog 1
    Protein Accession:
    Q8WTU0
    Secondary Accessions:
    • Q7Z4U6
    • Q8WTS3

    Protein attributes for DDI1 Gene

    Size:
    396 amino acids
    Molecular mass:
    44124 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for DDI1 Gene

neXtProt entry for DDI1 Gene

Proteomics data for DDI1 Gene at MOPED

Post-translational modifications for DDI1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for DDI1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DDI1 Gene

Domains for DDI1 Gene

Suggested Antigen Peptide Sequences for DDI1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8WTU0

UniProtKB/Swiss-Prot:

DDI1_HUMAN :
  • Q8WTU0
Domain:
  • Contains 1 ubiquitin-like domain.
Family:
  • Belongs to the DDI1 family.
genes like me logo Genes that share domains with DDI1: view

No data available for Gene Families for DDI1 Gene

Function for DDI1 Gene

Gene Ontology (GO) - Molecular Function for DDI1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004190 aspartic-type endopeptidase activity IEA --
GO:0005515 protein binding IPI 21516116
genes like me logo Genes that share ontologies with DDI1: view

Phenotypes for DDI1 Gene

GenomeRNAi human phenotypes for DDI1:
genes like me logo Genes that share phenotypes with DDI1: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for DDI1 Gene

Localization for DDI1 Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for DDI1 Gene COMPARTMENTS Subcellular localization image for DDI1 gene
Compartment Confidence
cytosol 3
cytoskeleton 2
extracellular 1
nucleus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for DDI1 Gene

Pathways for DDI1 Gene

SuperPathways for DDI1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for DDI1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006508 proteolysis IEA --
genes like me logo Genes that share ontologies with DDI1: view

No data available for Pathways by source for DDI1 Gene

Transcripts for DDI1 Gene

mRNA/cDNA for DDI1 Gene

(6) Additional mRNA sequences :
(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DDI1 Gene

DNA-damage inducible 1 homolog 1 (S. cerevisiae):
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for DDI1

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for DDI1

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for DDI1 Gene

No ASD Table

Relevant External Links for DDI1 Gene

GeneLoc Exon Structure for
DDI1
ECgene alternative splicing isoforms for
DDI1

Expression for DDI1 Gene

mRNA expression in normal human tissues for DDI1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for DDI1 Gene

SOURCE GeneReport for Unigene cluster for DDI1 Gene Hs.591941

genes like me logo Genes that share expressions with DDI1: view

In Situ Assay Products

No data available for mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for DDI1 Gene

Orthologs for DDI1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for DDI1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia DDI1 35
  • 98.98 (n)
  • 98.98 (a)
cow
(Bos Taurus)
Mammalia DDI1 35
  • 78.63 (n)
  • 80.26 (a)
DDI1 36
  • 79 (a)
OneToOne
dog
(Canis familiaris)
Mammalia DDI1 35
  • 80.96 (n)
  • 83.76 (a)
DDI1 36
  • 82 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Ddi1 35
  • 80.54 (n)
  • 82.74 (a)
Ddi1 16
Ddi1 36
  • 77 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia DDI1 36
  • 69 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Ddi1 35
  • 80.05 (n)
  • 83.59 (a)
fruit fly
(Drosophila melanogaster)
Insecta rngo 36
  • 41 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea C01G5.6 36
  • 27 (a)
OneToMany
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes DDI1 36
  • 28 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.9741 36
  • 41 (a)
OneToMany
Species with no ortholog for DDI1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • zebrafish (Danio rerio)

Evolution for DDI1 Gene

ENSEMBL:
Gene Tree for DDI1 (if available)
TreeFam:
Gene Tree for DDI1 (if available)

Paralogs for DDI1 Gene

Paralogs for DDI1 Gene

Selected SIMAP similar genes for DDI1 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with DDI1: view

Variants for DDI1 Gene

Sequence variations from dbSNP and Humsavar for DDI1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
VAR_032259 -
VAR_032260 -
VAR_032261 -

Structural Variations from Database of Genomic Variants (DGV) for DDI1 Gene

Variant ID Type Subtype PubMed ID
esv2750977 CNV Gain 17911159

Relevant External Links for DDI1 Gene

HapMap Linkage Disequilibrium report
DDI1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DDI1 Gene

Disorders for DDI1 Gene

Relevant External Links for DDI1

Genetic Association Database (GAD)
DDI1
Human Genome Epidemiology (HuGE) Navigator
DDI1
genes like me logo Genes that share disorders with DDI1: view

No data available for UniProtKB/Swiss-Prot for DDI1 Gene

Publications for DDI1 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 3 48
  3. Next-generation sequencing to generate interactome datasets. (PMID: 21516116) Yu H. … Vidal M. (Nat. Methods 2011) 3
  4. A proteome-scale map of the human interactome network. (PMID: 25416956) Rolland T. … Vidal M. (Cell 2014) 3
  5. Genome-wide association scan identifies variants near Matrix Metalloproteinase (MMP) genes on chromosome 11q21-22 strongly associated with serum MMP-1 levels. (PMID: 20031604) Cheng Y.C. … Pollin T.I. (Circ Cardiovasc Genet 2009) 48

Products for DDI1 Gene

  • Addgene plasmids for DDI1

Sources for DDI1 Gene

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