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Aliases for DCTN1-AS1 Gene

Subcategory (RNA class) for DCTN1-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DCTN1-AS1 Gene

  • DCTN1 Antisense RNA 1 2 3 5
  • DCTN1 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for DCTN1-AS1 Gene

Previous GeneCards Identifiers for DCTN1-AS1 Gene

  • GC02P074614
  • GC02P074615

Summaries for DCTN1-AS1 Gene

GeneCards Summary for DCTN1-AS1 Gene

DCTN1-AS1 (DCTN1 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DCTN1-AS1 Gene

Genomics for DCTN1-AS1 Gene

Regulatory Elements for DCTN1-AS1 Gene

Enhancers for DCTN1-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH02F074387 0.2 Ensembl 0.8 +1.8 1816 0.2 SCRT2 PRDM10 PRDM1 DCTN1 DCTN1-AS1
GH02F074388 0.6 Ensembl 0.8 +2.5 2515 0.4 ENSG00000272183 DCTN1 DCTN1-AS1
GH02F074389 0.5 ENCODE 0.8 +2.1 2103 0.2 PRDM10 DCTN1 DCTN1-AS1
GH02F074383 0.6 ENCODE 0.8 -2.0 -1987 0.7 CEBPA CEBPB CEBPG RAD21 YY1 ENSG00000272183 DCTN1-AS1 GC02M074371
GH02F074381 0.2 Ensembl 0.8 -4.2 -4186 0.2 DCTN1-AS1 GC02M074371
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DCTN1-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DCTN1-AS1 Gene

Chromosome:
2
Start:
74,385,486 bp from pter
End:
74,393,882 bp from pter
Size:
8,397 bases
Orientation:
Plus strand

Genomic View for DCTN1-AS1 Gene

Genes around DCTN1-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DCTN1-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DCTN1-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DCTN1-AS1 Gene

Proteins for DCTN1-AS1 Gene

Post-translational modifications for DCTN1-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DCTN1-AS1 Gene

Domains & Families for DCTN1-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DCTN1-AS1 Gene

Function for DCTN1-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DCTN1-AS1 Gene

Localization for DCTN1-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DCTN1-AS1 Gene

Pathways & Interactions for DCTN1-AS1 Gene

SuperPathways for DCTN1-AS1 Gene

No Data Available

Interacting Proteins for DCTN1-AS1 Gene

Gene Ontology (GO) - Biological Process for DCTN1-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DCTN1-AS1 Gene

Transcripts for DCTN1-AS1 Gene

mRNA/cDNA for DCTN1-AS1 Gene

(2) Additional mRNA sequences :
(6) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DCTN1-AS1 Gene

DCTN1 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DCTN1-AS1 Gene

No ASD Table

Relevant External Links for DCTN1-AS1 Gene

GeneLoc Exon Structure for
DCTN1-AS1
ECgene alternative splicing isoforms for
DCTN1-AS1

Expression for DCTN1-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DCTN1-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DCTN1-AS1 Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x4.9), Brain - Nucleus accumbens (basal ganglia) (x4.8), and Brain - Caudate (basal ganglia) (x4.3).

SOURCE GeneReport for Unigene cluster for DCTN1-AS1 Gene:

Hs.585961
genes like me logo Genes that share expression patterns with DCTN1-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DCTN1-AS1 Gene

Orthologs for DCTN1-AS1 Gene

Evolution for DCTN1-AS1 Gene

ENSEMBL:
Gene Tree for DCTN1-AS1 (if available)
TreeFam:
Gene Tree for DCTN1-AS1 (if available)

No data available for Orthologs for DCTN1-AS1 Gene

Paralogs for DCTN1-AS1 Gene

No data available for Paralogs for DCTN1-AS1 Gene

Variants for DCTN1-AS1 Gene

Sequence variations from dbSNP and Humsavar for DCTN1-AS1 Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type
rs10183207 -- 74,390,112(+) CCACA(C/T)CCATC intron-variant
rs10190910 -- 74,383,928(+) ATTCA(C/T)TATTT intron-variant
rs10193891 -- 74,384,596(+) AATTA(C/T)AGGAA intron-variant
rs10194096 -- 74,384,818(+) GGAGC(G/T)TGTCT intron-variant
rs10469967 -- 74,389,489(+) CTGGC(A/C)GAGTA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DCTN1-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2759061 CNV loss 17122850
nsv458185 CNV loss 19166990
nsv515851 CNV loss 19592680
nsv582214 CNV loss 21841781
nsv834261 CNV loss 17160897

Relevant External Links for DCTN1-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DCTN1-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DCTN1-AS1 Gene

Disorders for DCTN1-AS1 Gene

Relevant External Links for DCTN1-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DCTN1-AS1

No disorders were found for DCTN1-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DCTN1-AS1 Gene

Publications for DCTN1-AS1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DCTN1-AS1 Gene

Sources for DCTN1-AS1 Gene

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