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Category Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21

GIFtS
-

DCN Gene

protein-coding GIFtS: 69
GCID: GC12M091472

decorin

Explore 116 diseases affiliated with
DCN via

MalaCards

our new
Human Malady Compendium

(According to ¹HGNC, ²Entrez Gene,
³UniProtKB/Swiss-Prot, ⁴UniProtKB/TrEMBL, ⁵OMIM, ⁶GeneLoc, ⁷Ensembl, ⁸DME, ⁹miRBase, and/or ¹⁰fRNAdb)
About This Section

Aliases
Decorin¹		PGII²
SLRR1B¹ ² ³		PGS2²
DSPG2¹ ²		Decorin Proteoglycan²
Bone Proteoglycan II² ³		Dermatan Sulphate Proteoglycans II²
PG-S2² ³		Proteoglycan Core Protein²
PG40² ³		Small Leucine-Rich Protein 1B²
CSCD² ⁵

External Ids:	HGNC: 2705¹	Entrez Gene: 1634²	Ensembl: ENSG00000011465⁷	OMIM: 125255⁵	UniProtKB: P07585³

Export aliases for DCN gene to outside databases

Previous GC identifers: GC12M090861 GC12M091986 GC12M090041 GC12M088606

(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for DCN:

The protein encoded by this gene is a small cellular or pericellular matrix proteoglycan that is closely related in

structure to biglycan protein. The encoded protein and biglycan are thought to be the result of a gene duplication.

This protein is a component of connective tissue, binds to type I collagen fibrils, and plays a role in matrix

assembly. It contains one attached glycosaminoglycan chain. This protein is capable of suppressing the growth of

various tumor cell lines. There are multiple alternatively spliced transcript variants known for this gene. This gene

is a candidate gene for Marfan syndrome. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: PGS2_HUMAN, P07585

Function: May affect the rate of fibrils formation

Gene Wiki entry for DCN (Decorin)

(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section

RefSeq DNA sequence:

NC_000012.11 NC_018923.1 NT_029419.12

Regulatory elements:

SABiosciences Regulatory transcription factor binding sites in the DCN gene promoter:
AP-1
Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 2): DCN promoter sequence

Search SABiosciences Chromatin IP Primers for DCN

Epigenetics:

QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat DCN

Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 12q21.33 Ensembl cytogenetic band: 12q21.33 HGNC cytogenetic band: 12q23

DCN Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
DCN gene location

GeneLoc information about chromosome 12 GeneLoc Exon Structure

GeneLoc location for GC12M091472: view genomic region (about GC identifiers)

Start:	91,539,025 bp from pter	End:	91,576,900 bp from pter
Size:	37,876 bases	Orientation:	minus strand

(According to ¹UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to ²PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: PGS2_HUMAN, P07585 (See protein sequence)

Recommended Name: Decorin precursor

Size: 359 amino acids; 39747 Da

Subunit: Binds to type I and type II collagen, fibronectin and TGF-beta. Forms a ternary complex with MFAP2 and ELN.

Interacts with DPT (By similarity)

Subcellular location: Secreted, extracellular space, extracellular matrix

Secondary accessions: Q9P0Z0 Q9P0Z1 Q9Y5N8 Q9Y5N9

Alternative splicing: 5 isoforms: P07585-1 P07585-2 P07585-3 P07585-4 P07585-5

Explore the universe of human proteins at neXtProt for DCN: NX_P07585

Post-translational modifications:

The attached glycosaminoglycan chain can be either chondroitin sulfate or dermatan sulfate depending upon the tissue of

origin¹

View modification sites using PhosphoSitePlus²

View neXtProt modification sites for NX_P07585

DCN Protein expression data from MOPED and PaxDb: About this image

REFSEQ proteins (6 alternative transcripts):

NP_001911.1 NP_598010.1 NP_598011.1 NP_598012.1 NP_598013.1 NP_598014.1

ENSEMBL proteins:

ENSP00000052754 ENSP00000448853 ENSP00000447654 ENSP00000413723 ENSP00000399815

ENSP00000447674 ENSP00000446530 ENSP00000398514 ENSP00000449408 ENSP00000449782

ENSP00000447886 ENSP00000449014 ENSP00000449438 ENSP00000446527 ENSP00000448857

ENSP00000448057 ENSP00000448274 ENSP00000228329 ENSP00000302031 ENSP00000376862

ENSP00000401021

Reactome Protein details: P07585
Human Recombinant Protein Products:

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	R&D Systems Recombinant & Natural Proteins for DCN (Decorin)
	Browse recombinant and purified proteins available from Enzo Life Sciences
	OriGene Purified Proteins (see all 2): DCN OriGene Protein Over-expression Lysate (see all 3): DCN OriGene Custom Protein Services for DCN
	GenScript Custom Purified and Recombinant Proteins Services for DCN
	Novus Biologicals DCN Lysates
	Sino Biological Recombinant Protein for DCN
	Browse ProSpec Recombinant Proteins
	Uscn Proteins for DCN

Gene Ontology (GO): 5/7 cellular component terms (GO ID links to tree view) (see all 7): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005576	extracellular region	TAS	--
GO:0005578	proteinaceous extracellular matrix	--	--
GO:0005589	collagen type VI	IEA	--
GO:0005615	extracellular space	IDA	--
GO:0005796	Golgi lumen	TAS	--

DCN for ontologies About GeneDecksing

DCN Antibody Products:

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	Novus Biologicals DCN Antibodies
	Abcam antibodies for DCN
	Uscn Antibodies for DCN
	ThermoFisher Antibody for DCN

Assay Products for DCN:

	Browse Kits and Assays available from EMD Millipore
	OriGene Custom Immunoassay Development Browse OriGene Fluorogenic Cell Assay Kits
	R&D Systems ELISAs for DCN (Decorin)
	GenScript Custom Assay Services for DCN
	Browse Enzo Life Sciences for kits & assays
	Uscn ELISAs and CLIAs for DCN

(According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
About This Section

DCN for domains About GeneDecksing

4 InterPro domains/families:

IPR001611 Leu-rich_rpt

IPR003591 Leu-rich_rpt_typical-subtyp

IPR000372 LRR-contain_N

IPR016352 SLRP_I_decor/aspor/byglycan

Graphical View of Domain Structure for InterPro Entry P07585

ProtoNet protein and cluster: P07585

2 Blocks protein families:

IPB000372 Cysteine-rich flanking region

IPB001611 Leucine-rich repeat signature

UniProtKB/Swiss-Prot: PGS2_HUMAN, P07585

Similarity: Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily

Similarity: Contains 12 LRR (leucine-rich) repeats

(According to ¹UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or ²DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
About This Section

Function Summary:

UniProtKB/Swiss-Prot: PGS2_HUMAN, P07585

Function: May affect the rate of fibrils formation

Genatlas biochemistry entry for DCN:

decorin,small collagen-binding proteoglycan of the extracellular matrix,leucine-rich repeats (LRR) family,involved in

the differentiation of retinal glanglion cells

miRNA Products:		OriGene 3'-UTR Clone (see all 6): DCN Browse MicroRNA Expression Plasmids
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat DCN
		2 QIAGEN miScript miRNA Assays for microRNAs that regulate DCN:
		hsa-miR-374c hsa-miR-655
		SwitchGear 3'UTR luciferase reporter plasmid: DCN 3' UTR sequence

Inhib. RNA Products:		Browse for Gene Knock-down Tools from EMD Millipore
		OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DCN (see all 7) OriGene shRNA RFP: DCN OriGene siRNA: DCN
		QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DCN

Gene Editing
Products:

DNA2.0 Custom Protein Engineering Service for DCN

Clone Products:		Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
		OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DCN (see all 9) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DCN (see all 7) OriGene custom cloning services � gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
		GenScript: all cDNA clones in your preferred vector (see all 6): DCN (NM_133507)
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Cell Line Products:		GenScript Custom overexpressing Cell Line Services for DCN
		LifeMap BioReagents: cell lines associated with DCN: PureStem 7PEND24, NCr-fac & Meso-prx Progenitor, PureStem MEL2, NCr-fac Progenitor, PureStem SK11, NCr-fac & Meso-prx Progenitor, PureStem Z11, Meso Progenitor

In Situ Assay
Products:

Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for DCN

Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0005518	collagen binding	IEA	--
GO:0005539	glycosaminoglycan binding	IEA	--
GO:0047485	protein N-terminus binding	IEA	--
GO:0050840	extracellular matrix binding	IEA	--

DCN for ontologies About GeneDecksing

1 GenomeRNAi human phenotype for DCN:

Increased gamma-H2AX phosphory

Animal Models:
Mouse knock-out Dcn^tm1Ioz for DCN
15/18 MGI mutant phenotypes (inferred from 1 allele) (MGI details for Dcn) (see all 18):

behavior/neurological	cellular	craniofacial	digestive/alimentary	endocrine/exocrine gland
growth/size	hematopoietic system	homeostasis/metabolism	immune system	integument
mortality/aging	muscle	renal/urinary system	reproductive system	respiratory system

DCN for phenotypes About GeneDecksing

(Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to ¹UniProtKB, ²MINT, ³I2D, and/or ⁴STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
About This Section

Unified GeneCards pathways - 5/9 super-pathways (see all 9) About this table

See pathways by source

Super-pathway

contained gene-specific pathways

MPS IIIC - Sanfilippo syndrome C

8/15 pathways (see all 15)
MPS IIIC - Sanfilippo syndrome C	1.00	MPS IIID - Sanfilippo syndrome D	1.00
MPS I - Hurler syndrome	1.00	MPS IX - Natowicz syndrome	1.00
Mucopolysaccharidoses	1.00	MPS II - Hunter syndrome	1.00
MPS IV - Morquio syndrome A	1.00	Glycosaminoglycan metabolism	1.00

DSPGs are secreted

DSPG and CSPG translocate to the lysosome for degradation	1.00	CSPG is secreted	1.00
DSPGs are secreted	1.00	Dermatan sulfate biosynthesis	0.70
CS is cleaved from its proteoglycan	1.00	CS/DS degradation	0.54
DS is cleaved from its proteoglycan	1.00

A tetrasaccharide linker sequence is required for GAG synthesis

A tetrasaccharide linker sequence is required for GAG synthesis

1.00

Chondroitin sulfate/dermatan sulfate metabolism

0.54

Disease

Disease

1.00

Metabolism

Metabolism

1.00

Pathway sources
See GeneCards unified pathways
Show all pathways

1 R&D Systems Pathway for DCN

Articular Cartilage Extracellular Matrix

1 BioSystems Pathway for DCN

Validated transcriptional targets of AP1 family members Fra1 and Fra2

5/27 Reactome Pathways for DCN (see all 27)

	Chondroitin sulfate/dermatan sulfate metabolism
	MPS VI - Maroteaux-Lamy syndrome
	Metabolism
	DSPG and CSPG translocate to the lysosome for degradation
	Disease

1 Kegg Pathway (Kegg details for DCN):

TGF-beta signaling pathway

DCN for pathways About GeneDecksing

Interactions:

SABiosciences Gene Network Central^TM Interacting Genes and Proteins Network for DCN

STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

5/70 Interacting proteins for DCN (P07585³ ENSP00000052754⁴) via UniProtKB, MINT, STRING, and/or I2D (see all 70)

Interactant		Interaction Details
GeneCard	External ID(s)	Interaction Details
COL14A1	Q05707³, ENSP00000297848⁴	I2D: score=2 STRING: ENSP00000297848
PLA2G2A	P14555³, ENSP00000364252⁴	I2D: score=2 STRING: ENSP00000364252
COL1A1	P02452³, ENSP00000225964⁴	I2D: score=1 STRING: ENSP00000225964
COL4A4	P53420³, ENSP00000379866⁴	I2D: score=1 STRING: ENSP00000379866
COL4A6	Q14031³, ENSP00000361290⁴	I2D: score=1 STRING: ENSP00000361290

About this table

Gene Ontology (GO): 5/16 biological process terms (GO ID links to tree view) (see all 16): About this table

GO ID	Qualified GO term	Evidence	PubMed IDs
GO:0001822	kidney development	IEA	--
GO:0001890	placenta development	IEA	--
GO:0005975	carbohydrate metabolic process	TAS	--
GO:0007519	skeletal muscle tissue development	IEA	--
GO:0007568	aging	IEA	--

DCN for ontologies About GeneDecksing

(Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
About This Section

DCN for compounds About GeneDecksing

Browse Small Molecules at EMD Millipore

Browse drugs & compounds from Enzo Life Sciences

Browse Tocris compounds for DCN

1 DrugBank Compound for DCN About this table

Compound	Synonyms	CAS #	Type	Actions	PubMed Ids
Tris(Hydroxymethyl)Aminomethane	--	--	target	--	17139284 17016423 10592235

10/70 Novoseek chemical compound relationships for DCN gene (see all 70) About this table

Compound	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
glycosaminoglycan	90.2	116	9726998 (5), 12372409 (4), 2108171 (3), 17651433 (3) (see all 73)
dermatan sulfate	89.5	90	10536375 (4), 12531251 (2), 10749870 (2), 9727420 (2) (see all 61)
chondroitin	89.3	60	1605630 (3), 1711290 (2), 19557760 (2), 1744124 (2) (see all 46)
chondroitin sulfate	86.1	76	17286067 (6), 12531251 (3), 16498599 (3), 10536375 (3) (see all 50)
dermatan	83.7	17	9168858 (2), 10749870 (1), 7741696 (1), 9148753 (1) (see all 12)
keratan sulfate	82.8	11	8546427 (2), 20139802 (2), 1376375 (1), 8760363 (1) (see all 8)
galactosaminoglycan	80.3	7	12495820 (1), 19444760 (1), 8635597 (1), 12668676 (1) (see all 5)
dspg	79.3	11	8457255 (2), 16902402 (2), 1599405 (1), 10648661 (1) (see all 7)
l-iduronate	78.8	1	12207034 (1)
heparan sulfate	70.3	20	10585870 (2), 1639087 (1), 8397099 (1), 9328841 (1) (see all 16)

Search CenterWatch for drugs/clinical trials and news about DCN / PGS2

(Secondary structures according to fRNAdb,
GenBank/EMBL/DDBJ Accessions according to
Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
RNAi Products from EMD Millipore,
siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
About This Section

REFSEQ mRNAs for DCN gene (6 alternative transcripts):

NM_001920.3 NM_133503.2 NM_133504.2 NM_133505.2 NM_133506.2 NM_133507.2

Unigene Cluster for DCN:

Decorin

Hs.156316 [show with all ESTs]

Unigene Representative Sequence: NM_001920

18/22 Ensembl transcripts including schematic representations, and UCSC links where relevant (see all 22):

ENST00000052754(uc001tbo.3 uc001tbp.3 uc001tbq.3 uc001tbr.3 uc001tbu.3)

ENST00000548218 ENST00000552962 ENST00000420120 ENST00000441303 ENST00000547568

ENST00000546391 ENST00000456569 ENST00000550758 ENST00000547937 ENST00000552145

ENST00000550563 ENST00000549513 ENST00000546370 ENST00000546745 ENST00000550099

ENST00000551354 ENST00000548768

miRNA Products:		OriGene 3'-UTR Clone (see all 6): DCN Browse OriGene MicroRNA Expression Plasmids
		QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat DCN
		2 QIAGEN miScript miRNA Assays for microRNAs that regulate DCN:
		hsa-miR-374c hsa-miR-655
		SwitchGear 3'UTR luciferase reporter plasmid: DCN 3' UTR sequence

Inhib. RNA Products:		Browse for Gene Knock-down Tools from EMD Millipore
		OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for DCN (see all 7) OriGene shRNA RFP: DCN OriGene siRNA: DCN
		QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat DCN

Clone Products:		OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for DCN (see all 9) OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for DCN (see all 7) OriGene custom cloning services � gene synthesis, subcloning, mutagenesis, variant library, vector shuttling
		GenScript: all cDNA clones in your preferred vector (see all 6): DCN (NM_133507)
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		Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat DCN

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		QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat DCN
		QIAGEN QuantiFast Probe-based Assays in human, mouse, rat DCN

Additional cDNA sequence:

AF138300.1 AF138301.1 AF138302.1 AF138303.1 AF138304.1 AK291309.1 AL355731.1 BC005322.1

BT019800.1 BX571756.1 CR407676.1 CR541946.1

24/65 DOTS entries (see all 65):

DT.92468924 DT.99954679 DT.100891103 DT.100042199 DT.95305589 DT.100806878 DT.100032839 DT.100891123

DT.100723534 DT.92468934 DT.100733720 DT.100042195 DT.100891111 DT.100042205 DT.95305581 DT.100891114

DT.92468931 DT.95305642 DT.121111226 DT.405392 DT.100891081 DT.92468868 DT.100891126 DT.100042193

24/2381 AceView cDNA sequences (see all 2381):

BQ045071 BQ180873 CA413215 BX343891 CA334866 AA374374 AA359178 BU727376

CA441756 CD518494 AU119827 BU146592 CD514958 CA412742 BM874008 BM994885

BQ772943 BQ009059 CA440729 BF941175 AW028006 CN480192 BQ007604 BM989449

GeneLoc Exon Structure

5/17 Alternative Splicing Database (ASD) splice patterns (SP) for DCN (see all 17) About this scheme

ExUns:	1a	·	1b	·	1c	·	1d	^	2	^	3	^	4	^	5a	·	5b	·	5c	·	5d	·	5e	·	5f	^	6	^	7	^	8a	·	8b	·	8c	^	9	^	10a	·	10b	^	11a	·	11b	^	12a	·	12b	·	12c	·
SP1:									-		-		-		-		-		-		-		-		-		-										-		-		-
SP2:																											-										-		-		-
SP3:																																					-		-		-
SP4:																																					-		-		-		-		-
SP5:									-		-		-		-		-		-		-		-		-		-										-		-		-		-		-		-		-		-

ExUns:	12d	·	12e	^	13a	·	13b	^	14	^	15a	·	15b	·	15c	·	15d	^	16a	·	16b	·	16c	·	16d	·	16e
SP1:
SP2:
SP3:
SP4:
SP5:	-		-		-		-

ECgene alternative splicing isoforms for DCN

(RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
About This Section

DCN expression in normal human tissues (normalized intensities)
See probesets specificity/sensitivity at GeneAnnot
About this imageBioGPS
CGAP TAG: ACTTATTATG

About this image

DCN expression in embryonic tissues and stem cells

Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine About this table

10/15 LifeMap In Vivo Development Anatomical Compartments/Cells (see all 15)

Tissue

Anatomical Compartment

Cell

Category (developmental path)

Bone

Caudal Endochondral Bones

Endochondral Osteoblasts

Selective marker (cell-identifying gene)

Bone

Endochondral Facial Bones

Endochondral Osteoblasts

Bone

Rostral Endochondral Facial Bones

Endochondral Osteoblasts

Bone

Cartilage

Cervical Intervertebral Disc

Intervertebral Disc Nucleus Pulposus Cells

Cartilage

Lumbar Intervertebral Disc

Intervertebral Disc Nucleus Pulposus Cells

Cartilage

Sacral Intervertebral Disc

Intervertebral Disc Nucleus Pulposus Cells

Cartilage

Thoracic Intervertebral Disc

Intervertebral Disc Nucleus Pulposus Cells

Cartilage

Tendons & Ligaments

Axial Tendon Primordia

Early Tenocyte Cells

Tendons & Ligaments

Axial Tendons and Ligamnets

Tenocytes

Tendons & Ligaments

Limb Tendon Primordia

Early Tenocyte Cells

Tendons & Ligaments

Expression:

Positive

Negative

Selective marker

Experimental details:

Curated

Microarrays

In-situ hybridization

Stem Cell Differentiation: 10/18 LifeMap Cells (see all 18)

Name

Category

PureStem™ mesenchymal Progenitor SK11 (Embryonic Progenitor Cell)

Adipose, Bone, Cartilage

PureStem™ myogenic progenitor Z11 (Embryonic Progenitor Cell)

Heart, Myocardium, Smooth Muscle

PureStem™ mesenchymal progenitor 7PEND24 (Embryonic Progenitor Cell)

Cartilage, Neural Crest

PureStem™ progenitor EN13 (Embryonic Progenitor Cell)

PureStem™ progenitor EN7 (Embryonic Progenitor Cell)

PureStem™ progenitor RASMO12 (Embryonic Progenitor Cell)

PureStem™ progenitor W8 (Embryonic Progenitor Cell)

Connective tissue progenitor cells (Generation of connec...)

Syncytiotrophoblast-like cells (Generation of syncyt...)

Trophoblast-like cells (Generation of tropho...)

See DCN Protein Expression from SPIRE MOPED and PaxDB
Genevestigator expression for DCN

SOURCE GeneReport for Unigene cluster: Hs.156316

SABiosciences Expression via Pathway-Focused PCR Arrays including DCN:

Fibrosis in human mouse rat

Cell Lineage Identification in human mouse rat

TGFB/BMP Signaling Pathway in human mouse rat

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(Orthologs according to ^1,2HomoloGene (²older version, for species not in ¹newer version), ³euGenes, ⁴SGD , ⁵MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or ⁶Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
About This Section

This gene was present in the common ancestor of chordates.

Orthologs for DCN gene from 4/14 species (see all 14) About this table

Organism	Taxonomic classification	Gene	Description	Human Similarity	Orthology Type	Details
chicken (Gallus gallus)	Aves	DCN¹	decorin	75.35(n) 78.15(a)		417892 NM_001030747.1 NP_001025918.1
lizard (Anolis carolinensis)	Reptilia	DCN⁶	--	78(a)	1 ↔ 1	5(32298151-32330686)
African clawed frog (Xenopus laevis)	Amphibia	Xl.24505²	Xenopus laevis transcribed sequence with moderate similarity more	73.75(n)		CB564863.1
zebrafish (Danio rerio)	Actinopterygii	BC044206.1²	--	75.07(n)		64698 BC044206.1

ENSEMBL Gene Tree for DCN (if available)
TreeFam Gene Tree for DCN (if available)

(Paralogs according to ¹HomoloGene,
²Ensembl, and ³SIMAP, Pseudogenes according to ⁴Pseudogene.org Build 68)
About This Section

Paralogs for DCN gene

OGN² OPTC² PODN² PODNL1² FMOD² PRELP² KERA² ASPN²

OMD² BGN² EPYC² ECM2² LUM²

18/23 SIMAP similar genes for DCN using alignment to 12 protein entries: PGS2_HUMAN (see all proteins) (see all similar genes):

LRIG1 SLIT2 BGN LGR5 ASPN SLIT1

PXDNL LRRC3B LGR6 AMIGO1 LRRC70 PXDN

ZSCAN2 AMIGO3 SLIT3 PODN LGR4 TRIL

DCN for paralogs About GeneDecksing

(SNPs/Variants according to the ¹NCBI SNP Database, ²Ensembl, ³PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
About This Section

SNP ID	Valid	Clinical significance	Chr 12 pos	Sequence	#	AA Chg	Type	More	#	Allele freq	Pop	Total sample	More
Genomic Data					Transcription Related Data				Allele Frequencies
				--	--	--		--	--
rs3138291^1,2	C,F,H,	--	88606763(-)	`TAGATG/ATATTA`	6	--	ds500¹		13		NS EA NA WA	1324
rs35379812^1,2	F,	--	88607227(+)	`TCTCAA/GATGAG`	6	--	ut3¹		1		NA	120
rs3138290^1,2	C,F,H,	--	88607284(-)	`AATTTC/TCAGGA`	6	--	ut3¹ ese³		7		NS EA	556
rs3138289^1,2	C,F,H	--	88607414(-)	`GCCATT/CTTCAG`	6	--	ut3¹		7		NS EA NA	426
rs1803343^1,2	C,F,A,H,	--	88607553(-)	`ATGTCA/GTTGCT`	6	--	ut3¹ ese³		14		NS EA NA	1626
rs1803342^1,2	C	--	88607788(-)	`CTACCT/CTCATA`	12	/P /L	mis¹ syn¹		2		NA	4
rs3138288^1,2	C,F,A,H,	--	88607872(-)	`AAAAAA/G/TAATAA`	6	--	int¹		11		NS NA WA	1084
rs58455041^1,2		--	88607953(+)	`TGGAGG/TGCAGT`	6	--	int¹		0	--	--	--	--
rs3138287^1,2	C,F,H,	--	88608199(-)	`AAAGTG/TGGGCC`	6	--	int¹		13		NS EA NA WA	1418
rs3138286^1,2	C,F,H,	--	88608705(-)	`agagtA/Ggaagg`	6	--	int¹		8		NS EA WA	632

HapMap Linkage Disequilibrium report for DCN (91539025 - 91576900 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
Database of Genomic Variants (DGV): 2 variations for DCN
2 CNVs: 53592 4785
Human Gene Mutation Database (HGMD): DCN

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(in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
About This Section

DCN for disorders           About GeneDecksing

OMIM gene information: 125255
OMIM disorders: 610048
UniProtKB/Swiss-Prot: PGS2_HUMAN, P07585

Defects in DCN are the cause of congenital stromal corneal dystrophy (CSCD) [MIM:610048]. Corneal dystrophies

are inherited, bilateral, primary alterations of the cornea that are not associated with prior inflammation or

secondary to systemic disease. Most show autosomal dominant inheritance

20/116 diseases for DCN (see all 116): About MalaCards

marfan syndrome ehlers-danlos syndrome spinal cord injury osteogenesis imperfecta

bullous keratopathy congenital stromal corneal dystrophy dupuytren contracture epiphyseal dysplasia

corneal dystrophy aortic aneurysm muscular dystrophy gingival overgrowth

crouzon syndrome odontogenic myxoma multiple epiphyseal dysplasia pre-eclampsia

abdominal aortic aneurysm duchenne muscular dystrophy localized scleroderma lichen sclerosus

3 diseases from the University of Copenhagen DISEASES database for DCN:

Lyme disease Ehlers-Danlos syndrome Osteoarthritis

10/89 Novoseek disease relationships for DCN gene (see all 89) About this table

Disease	-log (P-Val)	Hits	PubMed IDs for Articles with Shared Sentences (# sentences)
collagen fibril	82.8	67	18622092 (4), 17530890 (3), 2059554 (3), 17651433 (3) (see all 50)
scars hypertrophic	61.1	23	9682679 (5), 19167828 (4), 17374457 (3), 10692030 (2) (see all 8)
osteoarthritis	42.2	4	11406617 (1), 18620607 (1), 8456642 (1), 11597178 (1)
scar	41.2	28	15312466 (5), 10692030 (3), 7544762 (2), 11039776 (2) (see all 13)
ehlers-danlos syndrome	39	4	11532373 (1), 16583246 (1), 15859521 (1), 17651433 (1)
bullous keratopathy	36.3	1	9727420 (1)
psach	36	1	11691584 (1)
osteosarcoma	34	16	18497961 (4), 18661352 (3), 18505923 (2), 2254344 (2) (see all 9)
crouzon syndrome	33.9	1	10384983 (1)
keloid	27.9	17	20386290 (6), 19268470 (6), 8949432 (1), 8262136 (1)

GeneTests: DCN

Congenital Stromal Corneal Dystrophy

Genetic Association Database (GAD): DCN
Human Genome Epidemiology (HuGE) Navigator: DCN (13 documents)

Export disorders for DCN gene to outside databases

(in PubMed. Associations of this gene to articles via ¹Entrez Gene, ²UniProtKB/Swiss-Prot, ³HGNC, ⁴GAD, ⁵PharmGKB, ⁶HMDB, ⁷DrugBank, ⁸UniProtKB/TrEMBL, ⁹ Novoseek, and/or ¹⁰fRNAdb)
About This Section

PubMed articles for DCN gene, integrated from 9 sources (see all 792):
(articles sorted by number of sources associating them with DCN)

Utopia: connect your pdf to the dynamic
world of online information

The human decorin gene: intron-exon organization, discovery of two alternatively spliced exons in the 5' untranslated region, and mapping of the gene to chromosome 12q23. (PubMed id 8432526)^{1, 2, 3, 9} Danielson K.G.... Iozzo R.V. (1993)
Congenital stromal dystrophy of the cornea caused by a mutation in the decorin gene. (PubMed id 15671264)^{1, 2, 9} Bredrup C.... Boman H. (2005)
The Decorin gene 179 allelic variant is associated with a slower progression of renal disease in patients with type 1 diabetes. (PubMed id 12187087)^{1, 4, 9} De Cosmo S....Viberti G.C. (2002)
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)^{1, 2} Gerhard D.S....Malek J. (2004)
Human decorin gene: intron-exon junctions and chromosomal localization. (PubMed id 8432527)^{1, 2} Vetter U.... Fisher L.W. (1993)
Dermatan sulphate proteoglycans of human articular cartilage. The properties of dermatan sulphate proteoglycans I and II. (PubMed id 2590169)^{1, 2} Roughley P.J. and White R.J. (1989)
Purification and partial characterization of small proteoglycans I and II, bone sialoproteins I and II, and osteonectin from the mineral compartment of developing human bone. (PubMed id 3597437)^{1, 2} Fisher L.W.... Termine J.D. (1987)
Primary structure of an extracellular matrix proteoglycan core protein deduced from cloned cDNA. (PubMed id 3484330)^{1, 2} Krusius T. and Ruoslahti E. (1986)
Endocytosis of the dermatan sulfate proteoglycan decorin utilizes multiple pathways and is modulated by epidermal growth factor receptor signaling. (PubMed id 17335953)^{1, 9} Feugaing D.D....Gotte M. (2007)
Purification and characterization of decorin from the culture media of MRC-5 cells. (PubMed id 15147741)^{1, 9} Honda E. and Munakata H. (2004)

(in PubMed, OMIM, and NCBI Bookshelf)
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		AND	OR
Aliases
Disorders
Free Text

Query String		PubMed OMIM NCBI Bookshelf
	(Note: In FireFox, select the above section and copy using Ctrl-C)

(According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
About This Section

Entrez Gene: 1634	HGNC: 2705	AceView: DCN	Ensembl:ENSG00000011465	euGenes: HUgn1634
ECgene: DCN	Kegg: 1634	H-InvDB: DCN

(According to HUGE)
About This Section

(According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section

Name	Description
PharmGKB entry for DCN	Pharmacogenomics, SNPs, Pathways
ATLAS Chromosomes in Cancer entry for DCN	Genetics and Cytogenetics in Oncology and Haematology
SeattleSNPs	http://pga.gs.washington.edu/data/dcn/

Intellectual Property for DCN gene
(Patent information from GeneIP, Licensable technologies from WIS Yeda, Salk, Tufts, IP news from LifeMap Sciences, Inc.)

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Patent Information for DCN gene:
Search GeneIP for patents involving DCN

GeneCards and IP:
Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search

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Ossification Heterotopic
Scars Hypertrophic
Carcinoma Basal Cell
Polyps
COLON CARCINOMA
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Edema
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