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Aliases for DCLRE1CP1 Gene

Aliases for DCLRE1CP1 Gene

  • DNA Cross-Link Repair 1C Pseudogene 1 2 3 5

External Ids for DCLRE1CP1 Gene

Previous GeneCards Identifiers for DCLRE1CP1 Gene

  • GC10M015070
  • GC10M015073
  • GC10M015076

Summaries for DCLRE1CP1 Gene

GeneCards Summary for DCLRE1CP1 Gene

DCLRE1CP1 (DNA Cross-Link Repair 1C Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DCLRE1CP1 Gene

Genomics for DCLRE1CP1 Gene

Regulatory Elements for DCLRE1CP1 Gene

Enhancers for DCLRE1CP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10G014530 1.4 Ensembl ENCODE dbSUPER 9.2 +540.6 540591 3.5 ELF3 TBP FOXA2 MLX ZNF133 ARID4B RAD21 DNMT3B THRB RARA CDNF HSPA14 SUV39H2 GAPDHP45 DCLRE1CP1 ACBD7 FAM107B GC10M014524 LOC105376429
GH10G015122 1.1 FANTOM5 ENCODE 11.2 -50.7 -50708 1.7 HDGF TBP PKNOX1 ZNF335 GATA2 ZNF143 FOS RELB JUNB GATAD2B ACBD7 C10orf111 RPP38 GAPDHP45 DCLRE1CP1 OLAH GC10P015124 GC10P015108
GH10G015046 1 ENCODE 11.2 +26.2 26184 0.2 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF48 ZNF2 ZNF143 KLF13 ZNF263 DCLRE1CP1 ACBD7 GAPDHP45 OLAH
GH10G014498 1 Ensembl ENCODE 9.7 +574.0 573981 1.0 CTCF ARID4B ZIC2 RAD21 GTF3C2 ZBTB48 SCRT2 ZNF207 SMC3 RCOR1 HSPA14 PRPF18 CDNF DCLRE1CP1 ACBD7 GAPDHP45 GC10M014524 FRMD4A
GH10G014528 0.9 ENCODE dbSUPER 9.3 +544.2 544247 0.8 JUND ATF3 TAF1 ZSCAN4 MAX RAD21 YY1 FOXA1 CDNF HSPA14 GAPDHP45 DCLRE1CP1 ACBD7 RPP38 C10orf111 GC10M014524 LOC105376429
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DCLRE1CP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DCLRE1CP1 Gene

Chromosome:
10
Start:
15,015,370 bp from pter
End:
15,073,080 bp from pter
Size:
57,711 bases
Orientation:
Minus strand

Genomic View for DCLRE1CP1 Gene

Genes around DCLRE1CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DCLRE1CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DCLRE1CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DCLRE1CP1 Gene

Proteins for DCLRE1CP1 Gene

Post-translational modifications for DCLRE1CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DCLRE1CP1 Gene

Domains & Families for DCLRE1CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DCLRE1CP1 Gene

Function for DCLRE1CP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DCLRE1CP1 Gene

Localization for DCLRE1CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DCLRE1CP1 Gene

Pathways & Interactions for DCLRE1CP1 Gene

SuperPathways for DCLRE1CP1 Gene

No Data Available

Interacting Proteins for DCLRE1CP1 Gene

Gene Ontology (GO) - Biological Process for DCLRE1CP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DCLRE1CP1 Gene

Drugs & Compounds for DCLRE1CP1 Gene

No Compound Related Data Available

Transcripts for DCLRE1CP1 Gene

mRNA/cDNA for DCLRE1CP1 Gene

(12) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DCLRE1CP1 Gene

No ASD Table

Relevant External Links for DCLRE1CP1 Gene

GeneLoc Exon Structure for
DCLRE1CP1
ECgene alternative splicing isoforms for
DCLRE1CP1

Expression for DCLRE1CP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DCLRE1CP1 Gene

mRNA differential expression in normal tissues according to GTEx for DCLRE1CP1 Gene

This gene is overexpressed in Brain - Amygdala (x7.3), Brain - Caudate (basal ganglia) (x6.7), Brain - Nucleus accumbens (basal ganglia) (x6.4), Brain - Putamen (basal ganglia) (x4.9), Brain - Frontal Cortex (BA9) (x4.4), and Brain - Hippocampus (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of DCLRE1CP1 Gene:

DCLRE1CP1
genes like me logo Genes that share expression patterns with DCLRE1CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DCLRE1CP1 Gene

Orthologs for DCLRE1CP1 Gene

Evolution for DCLRE1CP1 Gene

ENSEMBL:
Gene Tree for DCLRE1CP1 (if available)
TreeFam:
Gene Tree for DCLRE1CP1 (if available)

No data available for Orthologs for DCLRE1CP1 Gene

Paralogs for DCLRE1CP1 Gene

No data available for Paralogs for DCLRE1CP1 Gene

Variants for DCLRE1CP1 Gene

Sequence variations from dbSNP and Humsavar for DCLRE1CP1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs1000117129 -- 15,016,360(+) AAGGC(C/T)CTTGT intron-variant, reference, missense
rs1000133989 -- 15,035,334(+) AATTT(A/G)TGAGA intron-variant
rs1000211665 -- 15,028,419(+) AGCCA(C/G)CACAC intron-variant, upstream-variant-2KB
rs1000482252 -- 15,029,805(+) GAACT(A/G)AGCAT intron-variant, upstream-variant-2KB
rs1000511205 -- 15,029,589(+) GTTCT(A/C)ACCAT intron-variant, upstream-variant-2KB

Relevant External Links for DCLRE1CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DCLRE1CP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DCLRE1CP1 Gene

Disorders for DCLRE1CP1 Gene

Relevant External Links for DCLRE1CP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DCLRE1CP1

No disorders were found for DCLRE1CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DCLRE1CP1 Gene

Publications for DCLRE1CP1 Gene

No publications were found for DCLRE1CP1 Gene.

Products for DCLRE1CP1 Gene

Sources for DCLRE1CP1 Gene

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