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Aliases for DCLRE1CP1 Gene

Aliases for DCLRE1CP1 Gene

  • DNA Cross-Link Repair 1C Pseudogene 1 2 3 5

External Ids for DCLRE1CP1 Gene

Previous GeneCards Identifiers for DCLRE1CP1 Gene

  • GC10M015070
  • GC10M015073
  • GC10M015076

Summaries for DCLRE1CP1 Gene

GeneCards Summary for DCLRE1CP1 Gene

DCLRE1CP1 (DNA Cross-Link Repair 1C Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DCLRE1CP1 Gene

Genomics for DCLRE1CP1 Gene

Regulatory Elements for DCLRE1CP1 Gene

Enhancers for DCLRE1CP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH10F015116 1.2 FANTOM5 11.4 -43.8 -43798 0.3 GAPDHP45 ACBD7 DCLRE1CP1 CDNF HSPA14 C10orf111 GC10P015108 GC10P015124
GH10F015115 0.4 FANTOM5 11.4 -42.8 -42838 0.6 BCL11B ACBD7 GAPDHP45 DCLRE1CP1 CDNF HSPA14 C10orf111 GC10P015108 GC10P015124
GH10F015046 0.2 ENCODE 11.2 +26.2 26184 0.2 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF48 ZNF143 KLF13 ZNF263 DCLRE1CP1 ACBD7 GAPDHP45 OLAH
GH10F015047 0.4 Ensembl 11.2 +26.4 26380 0.2 ATF1 ZFP64 ARID4B SIN3A DMAP1 ZNF2 ZNF48 GLIS2 ZNF143 KLF13 DCLRE1CP1 ACBD7 GAPDHP45 FAM188A OLAH
GH10F015122 1.2 FANTOM5 ENCODE 11.2 -50.7 -50708 1.7 HDGF TBP PKNOX1 MXI1 ZNF384 EBF1 RELA ZNF335 GATA3 POLR2A ACBD7 C10orf111 RPP38 GAPDHP45 DCLRE1CP1 OLAH GC10P015124 GC10P015108
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around DCLRE1CP1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DCLRE1CP1 Gene

Chromosome:
10
Start:
15,015,370 bp from pter
End:
15,073,080 bp from pter
Size:
57,711 bases
Orientation:
Minus strand

Genomic View for DCLRE1CP1 Gene

Genes around DCLRE1CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DCLRE1CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DCLRE1CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DCLRE1CP1 Gene

Proteins for DCLRE1CP1 Gene

Post-translational modifications for DCLRE1CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DCLRE1CP1 Gene

Domains & Families for DCLRE1CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DCLRE1CP1 Gene

Function for DCLRE1CP1 Gene

Animal Model Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DCLRE1CP1 Gene

Localization for DCLRE1CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DCLRE1CP1 Gene

Pathways & Interactions for DCLRE1CP1 Gene

SuperPathways for DCLRE1CP1 Gene

No Data Available

Interacting Proteins for DCLRE1CP1 Gene

Gene Ontology (GO) - Biological Process for DCLRE1CP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DCLRE1CP1 Gene

Transcripts for DCLRE1CP1 Gene

mRNA/cDNA for DCLRE1CP1 Gene

(12) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for DCLRE1CP1 Gene

No ASD Table

Relevant External Links for DCLRE1CP1 Gene

GeneLoc Exon Structure for
DCLRE1CP1
ECgene alternative splicing isoforms for
DCLRE1CP1

Expression for DCLRE1CP1 Gene

mRNA expression in normal human tissues for DCLRE1CP1 Gene

mRNA differential expression in normal tissues according to GTEx for DCLRE1CP1 Gene

This gene is overexpressed in Brain - Amygdala (x7.3), Brain - Caudate (basal ganglia) (x6.7), Brain - Nucleus accumbens (basal ganglia) (x6.4), Brain - Putamen (basal ganglia) (x4.9), Brain - Frontal Cortex (BA9) (x4.4), and Brain - Hippocampus (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of DCLRE1CP1 Gene:

DCLRE1CP1
genes like me logo Genes that share expression patterns with DCLRE1CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DCLRE1CP1 Gene

Orthologs for DCLRE1CP1 Gene

Evolution for DCLRE1CP1 Gene

ENSEMBL:
Gene Tree for DCLRE1CP1 (if available)
TreeFam:
Gene Tree for DCLRE1CP1 (if available)

No data available for Orthologs for DCLRE1CP1 Gene

Paralogs for DCLRE1CP1 Gene

No data available for Paralogs for DCLRE1CP1 Gene

Variants for DCLRE1CP1 Gene

Sequence variations from dbSNP and Humsavar for DCLRE1CP1 Gene

SNP ID Clin Chr 10 pos Sequence Context AA Info Type
rs10535713 -- 15,030,715(+) TGAGA(-/CT)CTCTC intron-variant
rs10796244 -- 15,020,004(+) ACCTG(A/C)GGGCA intron-variant
rs10796245 -- 15,021,523(+) TAGAA(A/C)CCTAA intron-variant
rs10796246 -- 15,023,238(+) ACATG(C/T)CACGT intron-variant
rs10796247 -- 15,025,129(+) TGACA(A/G)AGTGA intron-variant

Relevant External Links for DCLRE1CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DCLRE1CP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DCLRE1CP1 Gene

Disorders for DCLRE1CP1 Gene

Relevant External Links for DCLRE1CP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DCLRE1CP1

No disorders were found for DCLRE1CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DCLRE1CP1 Gene

Publications for DCLRE1CP1 Gene

No publications were found for DCLRE1CP1 Gene.

Products for DCLRE1CP1 Gene

Sources for DCLRE1CP1 Gene

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