Free for academic non-profit institutions. Other users need a Commercial license

Aliases for DCLRE1CP1 Gene

Aliases for DCLRE1CP1 Gene

  • DNA Cross-Link Repair 1C Pseudogene 1 2 3 5

External Ids for DCLRE1CP1 Gene

Previous GeneCards Identifiers for DCLRE1CP1 Gene

  • GC10M015070
  • GC10M015073
  • GC10M015076

Summaries for DCLRE1CP1 Gene

GeneCards Summary for DCLRE1CP1 Gene

DCLRE1CP1 (DNA Cross-Link Repair 1C Pseudogene 1) is a Pseudogene.

Additional gene information for DCLRE1CP1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DCLRE1CP1 Gene

Genomics for DCLRE1CP1 Gene

GeneHancer (GH) Regulatory Elements for DCLRE1CP1 Gene

Promoters and enhancers for DCLRE1CP1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH10I014530 Enhancer 1.3 Ensembl ENCODE dbSUPER 9.2 +540.6 540590 3.5 ELF3 FOXA2 MLX ARID4B SIN3A RAD21 DNMT3B THRB RARA TCF12 CDNF HSPA14 SUV39H2 DCLRE1CP1 ACBD7 GAPDHP45 FAM107B GC10M014524 LOC105376429
GH10I015122 Enhancer 1 FANTOM5 ENCODE 11.2 -50.7 -50707 1.7 HDGF PKNOX1 EBF1 BATF KLF5 RELA GATA3 POLR2A ZNF143 ATF7 GC10P015124 ACBD7 C10orf111 RPP38 GAPDHP45 DCLRE1CP1 OLAH LOC105376431 GC10P015108 NMT2
GH10I015043 Promoter 0.8 EPDnew 11 +29.1 29149 0.1 SOX13 ATF4 CEBPA CEBPG TRIM24 GABPA OLAH DCLRE1CP1 ACBD7 GAPDHP45 RPP38 C10orf111
GH10I014498 Enhancer 0.9 Ensembl ENCODE 9.7 +574.0 573981 1 CTCF ARID4B RAD21 GTF3C2 ZNF335 ZBTB48 ZNF143 ZNF207 SMC3 RCOR1 CDNF HSPA14 ACBD7 DCLRE1CP1 GAPDHP45 GC10M014524 FRMD4A
GH10I015137 Enhancer 0.6 FANTOM5 10.1 -64.8 -64798 0.1 MEIS2 ZNF639 PKNOX1 CEBPB MAFG BACH1 CEBPG ZNF316 CREB1 NFE2 C10orf111 GAPDHP45 RPP38 ACBD7 DCLRE1CP1 GC10P015124 PPIAP30 LOC105376431 NMT2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DCLRE1CP1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DCLRE1CP1 Gene

Genomic Locations for DCLRE1CP1 Gene
chr10:15,015,370-15,073,080
(GRCh38/hg38)
Size:
57,711 bases
Orientation:
Minus strand
chr10:15,057,071-15,130,775
(GRCh37/hg19)

Genomic View for DCLRE1CP1 Gene

Genes around DCLRE1CP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DCLRE1CP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DCLRE1CP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DCLRE1CP1 Gene

Proteins for DCLRE1CP1 Gene

Post-translational modifications for DCLRE1CP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DCLRE1CP1 Gene

Domains & Families for DCLRE1CP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DCLRE1CP1 Gene

Function for DCLRE1CP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DCLRE1CP1 Gene

Localization for DCLRE1CP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for DCLRE1CP1 Gene

Pathways & Interactions for DCLRE1CP1 Gene

SuperPathways for DCLRE1CP1 Gene

No Data Available

Interacting Proteins for DCLRE1CP1 Gene

Gene Ontology (GO) - Biological Process for DCLRE1CP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DCLRE1CP1 Gene

Drugs & Compounds for DCLRE1CP1 Gene

No Compound Related Data Available

Transcripts for DCLRE1CP1 Gene

mRNA/cDNA for DCLRE1CP1 Gene

(12) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for DCLRE1CP1 Gene

No ASD Table

Relevant External Links for DCLRE1CP1 Gene

GeneLoc Exon Structure for
DCLRE1CP1
ECgene alternative splicing isoforms for
DCLRE1CP1

Expression for DCLRE1CP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DCLRE1CP1 Gene

mRNA differential expression in normal tissues according to GTEx for DCLRE1CP1 Gene

This gene is overexpressed in Brain - Amygdala (x7.3), Brain - Caudate (basal ganglia) (x6.7), Brain - Nucleus accumbens (basal ganglia) (x6.4), Brain - Putamen (basal ganglia) (x4.9), Brain - Frontal Cortex (BA9) (x4.4), and Brain - Hippocampus (x4.0).

NURSA nuclear receptor signaling pathways regulating expression of DCLRE1CP1 Gene:

DCLRE1CP1
genes like me logo Genes that share expression patterns with DCLRE1CP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DCLRE1CP1 Gene

Orthologs for DCLRE1CP1 Gene

Evolution for DCLRE1CP1 Gene

ENSEMBL:
Gene Tree for DCLRE1CP1 (if available)
TreeFam:
Gene Tree for DCLRE1CP1 (if available)

No data available for Orthologs for DCLRE1CP1 Gene

Paralogs for DCLRE1CP1 Gene

No data available for Paralogs for DCLRE1CP1 Gene

Variants for DCLRE1CP1 Gene

Sequence variations from dbSNP and Humsavar for DCLRE1CP1 Gene

SNP ID Clin Chr 10 pos Variation AA Info Type
rs1000117129 -- 15,016,360(-) T/C coding_sequence_variant, missense_variant
rs1000133989 -- 15,035,334(-) A/G genic_upstream_transcript_variant, intron_variant
rs1000211665 -- 15,028,419(-) C/G genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000482252 -- 15,029,805(-) G/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant
rs1000511205 -- 15,029,589(-) C/A genic_upstream_transcript_variant, intron_variant, upstream_transcript_variant

Additional Variant Information for DCLRE1CP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DCLRE1CP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for DCLRE1CP1 Gene

Disorders for DCLRE1CP1 Gene

Additional Disease Information for DCLRE1CP1

No disorders were found for DCLRE1CP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DCLRE1CP1 Gene

Publications for DCLRE1CP1 Gene

No publications were found for DCLRE1CP1 Gene.

Products for DCLRE1CP1 Gene

Sources for DCLRE1CP1 Gene

Content
Loading form....