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Aliases &
Descriptions
for DCDC5
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase)
About This Section
|
| Aliases |
|---|
| FLJ46154 1, 2 | | KIAA1493 2, 3, 5 |
| | | Descriptions |
|---|
| doublecortin domain containing 5 2 |
|
| |
Search outside databases for aliases for DCDC5 gene |
Summaries
for DCDC5(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| -- |
Genomic Location
for DCDC5
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences)
About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 11p14.1-p13 Ensembl cytogenetic band: 11p14.1 HGNC cytogenetic band: 11p14.1DCDC5 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
GeneLoc gene densities for chromosome 11 GeneLoc Exon Structure GeneLoc location for GC11M030809:
(about GC identifiers)
Start:
|
30,841,730 bp from pter |
End:
|
31,105,751 bp from pter |
Size:
|
264,022 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000011.8 NT_009237.17
| Proteins
for DCDC5
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: DCDC5_HUMAN, Q6ZRR9 (See
protein sequence)Recommended Name: Doublecortin domain-containing protein 5 Size: 648 amino acids; 72753 Da
Sequence caution: Sequence=BAC87240.1; Type=Miscellaneous discrepancy; Sequence=CAO03425.1;
Type=Erroneous gene model prediction;
Secondary accessions: B1AL47REFSEQ proteins: NP_940864.2
ENSEMBL proteins: ENSP00000385936 ENSP00000306898 ENSP00000341700
Human Recombinant Proteins  Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
Antibodies for DCDC5:
Assays for DCDC5: | Protein
Domains/
Families
for DCDC5(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q6ZRR9
ProtoNet protein and cluster: Q6ZRR9 1 Blocks protein family: IPB000772 Ricin B lectin domain
UniProtKB/Swiss-Prot: DCDC5_HUMAN, Q6ZRR9Similarity: Contains 2 doublecortin domains | Gene Function
for DCDC5
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_198462
 Applied Biosystems Silencer® siRNAs for DCDC5
 Sigma-Aldrich siRNA for DCDC5
Sigma-Aldrich shRNA for DCDC5
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene GFP tagged cDNA clone in CMV expression vector: NM_198462
Myc/DDK tagged cDNA clone in CMV expression vector: NM_198462
untagged cDNA clone in CMV expression vector: NM_198462
Primers:  Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
OriGene genome-wide validated SYBR primer pairs: NM_198462
| Pathways & Interactions
for DCDC5
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
--1 Gene Ontology (GO) biological process term (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0007242 | intracellular signaling cascade |
IEA | -- |
About this table
|
Drugs & Compounds
for DCDC5(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for DCDC5
|
Transcripts
for DCDC5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2): NM_198462
Sigma-Aldrich siRNA for DCDC5
Sigma-Aldrich shRNA for DCDC5
Explore Sigma-Aldrich super-pooled esiRNAs
REFSEQ mRNAs for DCDC5 gene: NM_198462.2
OriGene GFP tagged cDNA clone in CMV expression vector: NM_198462
Myc/DDK tagged cDNA clone in CMV expression vector: NM_198462
untagged cDNA clone in CMV expression vector: NM_198462
Additional cDNA sequence: AK128035.1 4 DOTS entries: DT.75168958 DT.101978078 DT.430080 DT.92013273 24/29 AceView cDNA sequences (see all 29
):BX117620 NM_198462 AA833549 BX097338 AI056882 BX116244 AK128035 AA005095 AI040110 AW340116 AK126066 AB040926 BX647348 AA846321 AA004887 AI243215 AY247970 BF957112 AA954541 AI684432 NM_181807 AI150472 AA680369 T55506
 highest scoring ESTs for DCDC5:AI056882 AK128035 BX647348 W04903 CN429222 DB061478 AA004887 AA005095 AA680369 AA833549 Unigene Cluster for DCDC5: Doublecortin domain containing 5 Hs.530438 [show with all ESTs]Unigene Representative Sequence: AK128035
GeneLoc Exon Structure
3 Alternative Splicing Database (ASD) splice patterns (SP) for DCDC5
| ExUns: | 1 | ^ | 2 | ^ | 3 | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10a | · | 10b | ^ | 11 | ^ | 12a | · | 12b | ^ | 13 | ^ | 14 | ^ | 15 | ^ | 16 | ^ | 17 | ^ | 18 |
|---|
|
| SP1: | | | | | | | | | | | | | | | | | | | | | - | | | | - | | | | | | | | | | | | | | | | |
| SP2: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
| SP3: | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | |
About this scheme
ECgene alternative splicing isoforms for DCDC5
3 Ensembl transcripts including schematic representations: ENST00000406071
ENST00000303697
ENST00000339794
|
Expression
for DCDC5
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| DCDC5 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for DCDC5
1 / 2 / 3 4 probe-sets matching DCDC5 gene Data from
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: GCAACTGGTC
SOURCE GeneReport for Unigene cluster: Hs.530438
|
Orthologs
for DCDC5
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for DCDC5 gene from 5 species
About this table Species with no ortholog for DCDC5
ENSEMBL Gene Tree for DCDC5 | Paralogs
for DCDC5(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| -- |
SNPs/Variants
for DCDC5(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for DCDC5 (up to first 250kb)
|
Disorders & Mutations
for DCDC5
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 612321
|
Medical News
for DCDC5(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for DCDC5 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 4 PubMed articles for DCDC5 gene: |
Search for DCDC5
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
|
Genome Databases showing DCDC5
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing DCDC5
(According to HUGE)
About This Section
| |
Specialized Databases showing DCDC5(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
| About This Section
| --
| Services
for DCDC5(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
| 
Products for DCDC5:
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Incremental update: 13 Oct 2009
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