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Aliases for DBH-AS1 Gene

Subcategory (RNA class) for DBH-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DBH-AS1 Gene

  • DBH Antisense RNA 1 2 3 5
  • DBH Antisense RNA 1 (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 118 2
  • NCRNA00118 3
  • BPR 3

External Ids for DBH-AS1 Gene

Previous HGNC Symbols for DBH-AS1 Gene

  • NCRNA00118

Previous GeneCards Identifiers for DBH-AS1 Gene

  • GC09U901708
  • GC09M136522

Summaries for DBH-AS1 Gene

GeneCards Summary for DBH-AS1 Gene

DBH-AS1 (DBH Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DBH-AS1 Gene

Genomics for DBH-AS1 Gene

Regulatory Elements for DBH-AS1 Gene

Enhancers for DBH-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F133713 1.6 FANTOM5 Ensembl ENCODE 13.5 -57.6 -57602 3.6 HDGF PKNOX1 ARNT MLX ZFP64 ARID4B DMAP1 YBX1 ZNF2 YY1 TSC1 SARDH DBH-AS1 LINC00094 ENSG00000273249 SURF6 COL5A1-AS1 GC09P133683
GH09F133619 1 Ensembl ENCODE 11.4 +37.3 37308 0.6 CTCF ZFP64 SIN3A ZNF2 RAD21 YY1 ZNF143 SMC3 PRDM10 CREM ADAMTSL2 DBH-AS1 TMEM8C SARDH FAM163B ENSG00000261018
GH09F133682 1 Ensembl ENCODE 10.7 -26.5 -26472 3.0 RING1 GTF2F1 KLF1 ZIC2 RAD21 ZNF335 HIC1 GLIS2 ZBTB48 POLR2A ENSG00000273249 TSC1 DBH-AS1 GC09P133683 SARDH
GH09F133659 1 Ensembl 10.1 -1.5 -1465 1.3 ARID4B FEZF1 ZNF48 YY1 GLIS2 KLF7 PAF1 SP3 SP5 MIER2 SARDH FAM163B ADAMTSL2 TMEM8C DBH-AS1 GC09M133655
GH09F133633 0.7 Ensembl ENCODE 11.6 +23.3 23273 0.9 MAFG NFE2 NR2F2 DBH-AS1 FAM163B DBH ENSG00000261018
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DBH-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DBH-AS1 Gene

Chromosome:
9
Start:
133,654,586 bp from pter
End:
133,657,408 bp from pter
Size:
2,823 bases
Orientation:
Minus strand

Genomic View for DBH-AS1 Gene

Genes around DBH-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DBH-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DBH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DBH-AS1 Gene

Proteins for DBH-AS1 Gene

Post-translational modifications for DBH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DBH-AS1 Gene

Domains & Families for DBH-AS1 Gene

Gene Families for DBH-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DBH-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DBH-AS1 Gene

Function for DBH-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DBH-AS1 Gene

Localization for DBH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DBH-AS1 Gene

Pathways & Interactions for DBH-AS1 Gene

SuperPathways for DBH-AS1 Gene

No Data Available

Interacting Proteins for DBH-AS1 Gene

Gene Ontology (GO) - Biological Process for DBH-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DBH-AS1 Gene

Transcripts for DBH-AS1 Gene

mRNA/cDNA for DBH-AS1 Gene

(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DBH-AS1 Gene

DBH antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DBH-AS1 Gene

No ASD Table

Relevant External Links for DBH-AS1 Gene

GeneLoc Exon Structure for
DBH-AS1
ECgene alternative splicing isoforms for
DBH-AS1

Expression for DBH-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for DBH-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DBH-AS1 Gene

This gene is overexpressed in Liver (x23.2).

SOURCE GeneReport for Unigene cluster for DBH-AS1 Gene:

Hs.223858
genes like me logo Genes that share expression patterns with DBH-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for DBH-AS1 Gene

Orthologs for DBH-AS1 Gene

Evolution for DBH-AS1 Gene

ENSEMBL:
Gene Tree for DBH-AS1 (if available)
TreeFam:
Gene Tree for DBH-AS1 (if available)

No data available for Orthologs for DBH-AS1 Gene

Paralogs for DBH-AS1 Gene

No data available for Paralogs for DBH-AS1 Gene

Variants for DBH-AS1 Gene

Sequence variations from dbSNP and Humsavar for DBH-AS1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs863225246 Pathogenic 133,657,174(+) CCTGT(A/G)CAGCT nc-transcript-variant, reference, missense
rs10118260 -- 133,657,595(+) GTACC(A/G)AATGC intron-variant, upstream-variant-2KB
rs10123232 -- 133,655,467(+) GAATC(C/T)GGCCC intron-variant, nc-transcript-variant
rs10634261 -- 133,654,116(+) TTTTA(-/TTT)TATTT intron-variant
rs10634262 -- 133,654,127(+) ATTTT(-/ATTT)TTTTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for DBH-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2739138 CNV deletion 23290073
esv3576711 CNV gain 25503493
nsv1125319 OTHER inversion 24896259
nsv466619 CNV loss 19166990
nsv615640 CNV loss 21841781
nsv951800 CNV deletion 24416366

Relevant External Links for DBH-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DBH-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DBH-AS1 Gene

Disorders for DBH-AS1 Gene

Relevant External Links for DBH-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DBH-AS1

No disorders were found for DBH-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DBH-AS1 Gene

Publications for DBH-AS1 Gene

  1. HBx-related long non-coding RNA DBH-AS1 promotes cell proliferation and survival by activating MAPK signaling in hepatocellular carcinoma. (PMID: 26393879) Huang J.L. … Wang Q. (Oncotarget 2015) 2 3 64
  2. Physical and cDNA mapping in the DBH region of human chromosome 9q34. (PMID: 10686491) Gilbert J.R. … Pericak-Vance M.A. (Hum. Hered. 2000) 2 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DBH-AS1 Gene

Sources for DBH-AS1 Gene

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