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Aliases for DBH-AS1 Gene

Subcategory (RNA class) for DBH-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for DBH-AS1 Gene

  • DBH Antisense RNA 1 2 3 5
  • DBH Antisense RNA 1 (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 118 2
  • NCRNA00118 3
  • BPR 3

External Ids for DBH-AS1 Gene

Previous HGNC Symbols for DBH-AS1 Gene

  • NCRNA00118

Previous GeneCards Identifiers for DBH-AS1 Gene

  • GC09U901708
  • GC09M136522

Summaries for DBH-AS1 Gene

GeneCards Summary for DBH-AS1 Gene

DBH-AS1 (DBH Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DBH-AS1 Gene

Genomics for DBH-AS1 Gene

Regulatory Elements for DBH-AS1 Gene

Enhancers for DBH-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09G133713 1.9 FANTOM5 Ensembl ENCODE dbSUPER 13.5 -57.6 -57640 3.5 HDGF FOXA2 PKNOX1 ARNT MLX ZFP64 ARID4B DMAP1 YBX1 ZNF2 SURF6 TSC1 SARDH DBH-AS1 ENSG00000273249 COL5A1-AS1 GC09P133683
GH09G133682 1 Ensembl ENCODE 10.7 -26.7 -26710 2.5 RING1 MAX ZIC2 RAD21 ZNF335 HIC1 GLIS2 ZBTB48 POLR2A PATZ1 ENSG00000273249 TSC1 DBH-AS1 GC09P133683 SARDH
GH09G133659 1 Ensembl 10 -1.3 -1344 0.9 FOXA2 ARID4B SIN3A FEZF1 ZNF48 YY1 GLIS2 KLF7 PAF1 SP3 DBH-AS1 GC09M133655
GH09G133619 0.8 ENCODE 11.4 +37.4 37435 0.2 CTCF RB1 ZFP64 MAX ZNF2 RAD21 YY1 ZNF143 SMC3 PRDM10 ADAMTSL2 DBH-AS1 MYMK SARDH FAM163B ENSG00000261018
GH09G133843 1.8 FANTOM5 Ensembl ENCODE dbSUPER 4.9 -187.7 -187716 3.2 HDAC1 RAD21 ZEB1 ZNF121 ZNF23 GLIS2 FOS ZNF263 ZNF280D ZNF362 LINC00094 SLC2A6 DBH-AS1 RPL7A GC09P133784 GC09M133930
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around DBH-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for DBH-AS1 Gene

Chromosome:
9
Start:
133,654,586 bp from pter
End:
133,657,408 bp from pter
Size:
2,823 bases
Orientation:
Minus strand

Genomic View for DBH-AS1 Gene

Genes around DBH-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DBH-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DBH-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for DBH-AS1 Gene

Proteins for DBH-AS1 Gene

Post-translational modifications for DBH-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for DBH-AS1 Gene

Domains & Families for DBH-AS1 Gene

Gene Families for DBH-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with DBH-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for DBH-AS1 Gene

Function for DBH-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DBH-AS1 Gene

Localization for DBH-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for DBH-AS1 Gene

Pathways & Interactions for DBH-AS1 Gene

SuperPathways for DBH-AS1 Gene

No Data Available

Interacting Proteins for DBH-AS1 Gene

Gene Ontology (GO) - Biological Process for DBH-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for DBH-AS1 Gene

Drugs & Compounds for DBH-AS1 Gene

No Compound Related Data Available

Transcripts for DBH-AS1 Gene

mRNA/cDNA for DBH-AS1 Gene

(6) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DBH-AS1 Gene

DBH antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for DBH-AS1 Gene

No ASD Table

Relevant External Links for DBH-AS1 Gene

GeneLoc Exon Structure for
DBH-AS1
ECgene alternative splicing isoforms for
DBH-AS1

Expression for DBH-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DBH-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for DBH-AS1 Gene

This gene is overexpressed in Liver (x23.2).

SOURCE GeneReport for Unigene cluster for DBH-AS1 Gene:

Hs.223858
genes like me logo Genes that share expression patterns with DBH-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DBH-AS1 Gene

Orthologs for DBH-AS1 Gene

Evolution for DBH-AS1 Gene

ENSEMBL:
Gene Tree for DBH-AS1 (if available)
TreeFam:
Gene Tree for DBH-AS1 (if available)

No data available for Orthologs for DBH-AS1 Gene

Paralogs for DBH-AS1 Gene

No data available for Paralogs for DBH-AS1 Gene

Variants for DBH-AS1 Gene

Sequence variations from dbSNP and Humsavar for DBH-AS1 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type
rs863225246 Pathogenic 133,657,174(+) CCTGT(A/G)CAGCT nc-transcript-variant, reference, missense
rs129914 Likely benign 133,658,725(+) CAGCC(C/T)GCACA upstream-variant-2KB, utr-variant-3-prime
rs13306304 Likely benign 133,658,837(+) GGAAC(A/G)CCCCC upstream-variant-2KB, utr-variant-3-prime
rs6271 Likely benign 133,657,152(+) TCAAC(C/T)GCGAC nc-transcript-variant, reference, missense
rs140355168 Uncertain significance 133,658,765(+) CTGTT(A/C)CGCCT upstream-variant-2KB, utr-variant-3-prime

Structural Variations from Database of Genomic Variants (DGV) for DBH-AS1 Gene

Variant ID Type Subtype PubMed ID
esv2739138 CNV deletion 23290073
esv3576711 CNV gain 25503493
nsv1125319 OTHER inversion 24896259
nsv466619 CNV loss 19166990
nsv615640 CNV loss 21841781
nsv951800 CNV deletion 24416366

Relevant External Links for DBH-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DBH-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for DBH-AS1 Gene

Disorders for DBH-AS1 Gene

Relevant External Links for DBH-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
DBH-AS1

No disorders were found for DBH-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DBH-AS1 Gene

Publications for DBH-AS1 Gene

  1. HBx-related long non-coding RNA DBH-AS1 promotes cell proliferation and survival by activating MAPK signaling in hepatocellular carcinoma. (PMID: 26393879) Huang J.L. … Wang Q. (Oncotarget 2015) 2 3 64
  2. Physical and cDNA mapping in the DBH region of human chromosome 9q34. (PMID: 10686491) Gilbert J.R. … Pericak-Vance M.A. (Hum. Hered. 2000) 2 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for DBH-AS1 Gene

Sources for DBH-AS1 Gene

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