Free for academic non-profit institutions. Other users need a Commercial license

DAW1 Gene(Protein Coding)

Dynein Assembly Factor With WD Repeats 1

GCID:
GC02P227871
GIFtS:
36
Genes Participants
UDN Logo

Aliases for DAW1 Gene

Aliases for DAW1 Gene

  • Dynein Assembly Factor With WD Repeats 1 2 3 5
  • Outer Row Dynein Assembly Protein 16 Homolog 3 4
  • WD Repeat-Containing Protein 69 3 4
  • WD Repeat Domain 69 2 3
  • WDR69 3 4
  • Outer Row Dynein Assembly 16 Homolog (Chlamydomonas) 2
  • Dynein Assembly Factor With WDR Repeat Domains 1 3
  • Testis Tissue Sperm-Binding Protein Li 93mP 3
  • Outer Row Dynein Assembly 16 Homolog 3
  • ODA16 3

External Ids for DAW1 Gene

Previous HGNC Symbols for DAW1 Gene

  • WDR69

Previous GeneCards Identifiers for DAW1 Gene

  • GC02P228736

Summaries for DAW1 Gene

GeneCards Summary for DAW1 Gene

DAW1 (Dynein Assembly Factor With WD Repeats 1) is a Protein Coding gene. An important paralog of this gene is PAFAH1B1.

UniProtKB/Swiss-Prot for DAW1 Gene

  • May play a role in axonemal outer row dynein assembly.

Additional gene information for DAW1 Gene

No data available for Entrez Gene Summary , CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for DAW1 Gene

Genomics for DAW1 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for DAW1 Gene

Promoters and enhancers for DAW1 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH02I227870 Promoter/Enhancer 1.7 EPDnew Ensembl ENCODE 562.6 +0.0 6 2 USF1 JUN MAX SIN3A RFX5 POLR2A RCOR1 FOSL2 FOS EZH2 DAW1 GC02M227870 TDGF1P2 ENSG00000272237 GC02M227871
GH02I227847 Enhancer 1.2 FANTOM5 ENCODE dbSUPER 22.6 -22.2 -22153 2.2 BATF IRF4 RELA NFATC1 ATF7 ETV6 BCLAF1 IKZF2 RUNX3 EZH2 DAW1 TDGF1P2 CCL20 GC02M227848 GC02P227844
GH02I227862 Enhancer 1.2 FANTOM5 Ensembl ENCODE 10.3 -7.6 -7606 2.5 FOXA2 RAD21 ZNF335 ZNF143 FOS ZNF654 CEBPB PPARG SP1 NFIL3 GC02M227862 DAW1 GC02M227848
GH02I227839 Enhancer 1 FANTOM5 Ensembl ENCODE 10.1 -31.2 -31171 0.6 KLF1 ZNF687 NR2F1 ELF1 DPF2 RARA CEBPA IKZF1 ATF7 IKZF2 CCL20 DAW1 AGFG1 GC02P227841 GC02P227817
GH02I227875 Enhancer 0.6 ENCODE 12.3 +5.1 5076 1.5 JUN SIN3A CEBPB EP300 ATF2 SP1 JUND POLR3A TCF7L2 DAW1 CCL20 GC02M227871 ENSG00000272237
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around DAW1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for DAW1 Gene

Genomic Locations for DAW1 Gene
chr2:227,871,054-227,924,347
(GRCh38/hg38)
Size:
53,294 bases
Orientation:
Plus strand
chr2:228,735,770-228,789,060
(GRCh37/hg19)

Genomic View for DAW1 Gene

Genes around DAW1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
DAW1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for DAW1 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for DAW1 Gene

Proteins for DAW1 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

  • Protein details for DAW1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q8N136-DAW1_HUMAN
    Recommended name:
    Dynein assembly factor with WDR repeat domains 1
    Protein Accession:
    Q8N136
    Secondary Accessions:
    • Q6ZRY1
    • Q8N776

    Protein attributes for DAW1 Gene

    Size:
    415 amino acids
    Molecular mass:
    45777 Da
    Quaternary structure:
    • Interacts with IFT46.

    Three dimensional structures from OCA and Proteopedia for DAW1 Gene

    Alternative splice isoforms for DAW1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for DAW1 Gene

Protein Expression for DAW1 Gene

See protein expression from ProteomicsDB, MOPED, PaxDb, and MaxQB

Post-translational modifications for DAW1 Gene

No Post-translational modifications

Other Protein References for DAW1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for DAW1 Gene

Domains & Families for DAW1 Gene

Gene Families for DAW1 Gene

HGNC:
Human Protein Atlas (HPA):
  • Predicted intracellular proteins

Protein Domains for DAW1 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for DAW1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q8N136

UniProtKB/Swiss-Prot:

DAW1_HUMAN :
  • Belongs to the WD repeat WDR69 family.
Family:
  • Belongs to the WD repeat WDR69 family.
genes like me logo Genes that share domains with DAW1: view

Function for DAW1 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Molecular function for DAW1 Gene

UniProtKB/Swiss-Prot Function:
May play a role in axonemal outer row dynein assembly.

Phenotypes for DAW1 Gene

GenomeRNAi human phenotypes for DAW1:
genes like me logo Genes that share phenotypes with DAW1: view

Animal Model Products

Clone Products

No data available for Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for DAW1 Gene

Localization for DAW1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for DAW1 Gene

Cell projection, cilium.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for DAW1 gene
Compartment Confidence
nucleus 2
cytosol 2
cytoskeleton 1
mitochondrion 1
peroxisome 1
endoplasmic reticulum 1

Subcellular locations from the

Human Protein Atlas (HPA)
  • Nuclear bodies (2)
  • Nucleoplasm (2)
See all subcellular structures

Gene Ontology (GO) - Cellular Components for DAW1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm IBA --
GO:0005929 cilium IEA --
GO:0042995 cell projection IEA --
genes like me logo Genes that share ontologies with DAW1: view

Pathways & Interactions for DAW1 Gene

SuperPathways for DAW1 Gene

PathCards logo More details on SuperPathways for DAW1
No Data Available

Gene Ontology (GO) - Biological Process for DAW1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007368 determination of left/right symmetry IEA --
GO:0007507 heart development IEA --
genes like me logo Genes that share ontologies with DAW1: view

No data available for Pathways by source and SIGNOR curated interactions for DAW1 Gene

Drugs & Compounds for DAW1 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for DAW1 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for DAW1 Gene

(4) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(32) Selected AceView cDNA sequences:
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for DAW1 Gene

Dynein assembly factor with WDR repeat domains 1:
Representative Sequences:

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for DAW1 Gene

No ASD Table

Relevant External Links for DAW1 Gene

GeneLoc Exon Structure for
DAW1
ECgene alternative splicing isoforms for
DAW1

Expression for DAW1 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for DAW1 Gene

mRNA expression in normal human tissues for DAW1 Gene
mRNA expression by BioGPS for DAW1 GenemRNA expression by GTEx for DAW1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for DAW1 Gene

This gene is overexpressed in Testis (x20.1), Brain - Nucleus accumbens (basal ganglia) (x5.2), and Brain - Caudate (basal ganglia) (x4.4).

Protein differential expression in normal tissues from HIPED for DAW1 Gene

This gene is overexpressed in Testis (37.5) and Heart (21.6).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for DAW1 Gene



Protein tissue co-expression partners for DAW1 Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of DAW1 Gene:

DAW1

SOURCE GeneReport for Unigene cluster for DAW1 Gene:

Hs.424594
genes like me logo Genes that share expression patterns with DAW1: view

No data available for mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for DAW1 Gene

Orthologs for DAW1 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for DAW1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
 Mammalia WDR69 33 34
  • 99.36 (n)
cow
(Bos Taurus)
 Mammalia DAW1 33 34
  • 90.36 (n)
dog
(Canis familiaris)
 Mammalia DAW1 33 34
  • 89.88 (n)
mouse
(Mus musculus)
 Mammalia Daw1 34
  • 89 (a)
 OneToOne
oppossum
(Monodelphis domestica)
 Mammalia DAW1 34
  • 86 (a)
 OneToOne
rat
(Rattus norvegicus)
 Mammalia Daw1 33
  • 84.42 (n)
platypus
(Ornithorhynchus anatinus)
 Mammalia -- 34
  • 84 (a)
 OneToMany
-- 34
  • 84 (a)
 OneToMany
chicken
(Gallus gallus)
 Aves WDR69 33
  • 76.89 (n)
DAW1 34
  • 75 (a)
 OneToOne
lizard
(Anolis carolinensis)
 Reptilia DAW1 34
  • 74 (a)
 OneToOne
tropical clawed frog
(Silurana tropicalis)
 Amphibia daw1 33
  • 73.09 (n)
MGC76247 33
African clawed frog
(Xenopus laevis)
 Amphibia Xl.12681 33
zebrafish
(Danio rerio)
 Actinopterygii daw1 33 34
  • 67.82 (n)
Dr.15604 33
rainbow trout
(Oncorhynchus mykiss)
 Actinopterygii Omy.2611 33
fruit fly
(Drosophila melanogaster)
 Insecta CG7568 33 34
  • 51.49 (n)
African malaria mosquito
(Anopheles gambiae)
 Insecta AgaP_AGAP009574 33
  • 31.04 (n)
baker's yeast
(Saccharomyces cerevisiae)
 Saccharomycetes RSA4 34
  • 21 (a)
 OneToMany
sea squirt
(Ciona savignyi)
 Ascidiacea CSA.9620 34
  • 67 (a)
 OneToOne
sea squirt
(Ciona intestinalis)
 Ascidiacea Cin.4284 33
Species where no ortholog for DAW1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for DAW1 Gene

ENSEMBL:
Gene Tree for DAW1 (if available)
TreeFam:
Gene Tree for DAW1 (if available)

Paralogs for DAW1 Gene

Variants for DAW1 Gene

Sequence variations from dbSNP and Humsavar for DAW1 Gene

SNP ID Clin Chr 02 pos Variation AA Info Type
rs113776284 A breast cancer sample 227,893,863(+) C/T 5_prime_UTR_variant, coding_sequence_variant, missense_variant
rs1000009704 -- 227,886,551(+) A/G genic_upstream_transcript_variant, intron_variant
rs1000049489 -- 227,891,342(+) T/C intron_variant
rs1000161202 -- 227,897,832(+) A/G intron_variant
rs1000250164 -- 227,876,189(+) T/G genic_upstream_transcript_variant, intron_variant

Structural Variations from Database of Genomic Variants (DGV) for DAW1 Gene

Variant ID Type Subtype PubMed ID
dgv2165n106 CNV duplication 24896259
nsv10221 CNV loss 18304495
nsv1076505 CNV duplication 25765185
nsv1149946 CNV duplication 26484159
nsv3192 CNV insertion 18451855
nsv518157 CNV loss 19592680
nsv834562 CNV gain 17160897

Variation tolerance for DAW1 Gene

Residual Variation Intolerance Score: 88.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 8.14; 84.67% of all genes are more intolerant (likely to be disease-causing)

Additional Variant Information for DAW1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
DAW1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for DAW1 Gene

Disorders for DAW1 Gene

Additional Disease Information for DAW1

ATLAS of Genetics and Cytogenetics in Oncology and Haematology

No disorders were found for DAW1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for DAW1 Gene

Publications for DAW1 Gene

  1. A unified taxonomy for ciliary dyneins. (PMID: 21953912) Hom EF … King SM (Cytoskeleton (Hoboken, N.J.) 2011) 2 3 58
  2. Oda16/Wdr69 is essential for axonemal dynein assembly and ciliary motility during zebrafish embryogenesis. (PMID: 20568242) Gao C … Mitchell DR (Developmental dynamics : an official publication of the American Association of Anatomists 2010) 2 3 58
  3. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 3 4 58
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 3 4 58

Products for DAW1 Gene

Sources for DAW1 Gene

Content
Loading form....